RNA–Protein interactions for RNA: ENST00000569036.2

CDH3-208, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-208ENST00000569036 ORM2P19652 201 aa7.64□□□□□ -1.19
CDH3-208ENST00000569036 KIR3DS1Q14943 382 aa7.64□□□□□ -1.19
CDH3-208ENST00000569036 ESRGQ1W209 222 aa7.64□□□□□ -1.19
CDH3-208ENST00000569036 SHANK2-AS3Q9BTD1 123 aa7.64□□□□□ -1.19
CDH3-208ENST00000569036 A0A087X0K7 114 aa7.63□□□□□ -1.19
CDH3-208ENST00000569036 A0A1W2PPM0 123 aa7.63□□□□□ -1.19
CDH3-208ENST00000569036 TMEM238C9JI98 176 aa7.63□□□□□ -1.19
CDH3-208ENST00000569036 H3BRN7 92 aa7.63□□□□□ -1.19
CDH3-208ENST00000569036 MLANAQ16655 118 aa7.63□□□□□ -1.19
CDH3-208ENST00000569036 RRN3P1Q2M238 152 aa7.63□□□□□ -1.19
CDH3-208ENST00000569036 FAM104BQ5XKR9 115 aa7.63□□□□□ -1.19
CDH3-208ENST00000569036 LINC00173Q6ZV60 143 aa7.63□□□□□ -1.19
CDH3-208ENST00000569036 Q6ZVH6 145 aa7.63□□□□□ -1.19
CDH3-208ENST00000569036 ZFAND3Q9H8U3 227 aa7.63□□□□□ -1.19
CDH3-208ENST00000569036 LYRM9A8MSI8 78 aa7.62□□□□□ -1.19
CDH3-208ENST00000569036 ATP5G1P05496 136 aa7.62□□□□□ -1.19
CDH3-208ENST00000569036 C1orf158Q8N1D5 194 aa7.62□□□□□ -1.19
CDH3-208ENST00000569036 PRELID3AQ96N28 172 aa7.62□□□□□ -1.19
CDH3-208ENST00000569036 CNFNQ9BYD5 112 aa7.62□□□□□ -1.19
CDH3-208ENST00000569036 AAMDCQ9H7C9 122 aa7.62□□□□□ -1.19
CDH3-208ENST00000569036 NXT2Q9NPJ8 142 aaKnown RBP7.62□□□□□ -1.19
CDH3-208ENST00000569036 PSG8Q9UQ74 426 aa7.62□□□□□ -1.19
CDH3-208ENST00000569036 ATP5LO75964 103 aa7.61□□□□□ -1.19
CDH3-208ENST00000569036 IGKV3-20P01619 116 aa7.61□□□□□ -1.19
CDH3-208ENST00000569036 ARMS2P0C7Q2 107 aa7.61□□□□□ -1.19
CDH3-208ENST00000569036 SMIM13P0DJ93 91 aa7.61□□□□□ -1.19
CDH3-208ENST00000569036 SIGLEC15Q6ZMC9 328 aa7.61□□□□□ -1.19
CDH3-208ENST00000569036 GOLT1AQ6ZVE7 132 aa7.61□□□□□ -1.19
CDH3-208ENST00000569036 PRNTQ86SH4 94 aa7.61□□□□□ -1.19
CDH3-208ENST00000569036 NFE4Q86UQ8 179 aa7.61□□□□□ -1.19
CDH3-208ENST00000569036 IFI27L1Q96BM0 104 aa7.61□□□□□ -1.19
CDH3-208ENST00000569036 A0A096LNJ9 63 aa7.6□□□□□ -1.19
CDH3-208ENST00000569036 EVI2AP22794 236 aa7.6□□□□□ -1.19
CDH3-208ENST00000569036 MFAP4P55083 255 aa7.6□□□□□ -1.19
CDH3-208ENST00000569036 Q6ZSA8 131 aa7.6□□□□□ -1.19
CDH3-208ENST00000569036 ZC2HC1AQ96GY0 325 aa7.6□□□□□ -1.19
CDH3-208ENST00000569036 MRPL36Q9P0J6 103 aaKnown RBP7.6□□□□□ -1.19
CDH3-208ENST00000569036 RPH3ALQ9UNE2 315 aa7.6□□□□□ -1.19
CDH3-208ENST00000569036 SPCS1Q9Y6A9 102 aa7.6□□□□□ -1.19
CDH3-208ENST00000569036 PRSS47A8MTI9 375 aa7.59□□□□□ -1.19
CDH3-208ENST00000569036 F8W1H4 67 aa7.59□□□□□ -1.19
CDH3-208ENST00000569036 I3L2K1 104 aa7.59□□□□□ -1.19
CDH3-208ENST00000569036 IGHV3-48P01763 117 aa7.59□□□□□ -1.19
CDH3-208ENST00000569036 LYZP61626 148 aa7.59□□□□□ -1.19
CDH3-208ENST00000569036 LELP1Q5T871 98 aa7.59□□□□□ -1.19
CDH3-208ENST00000569036 ERASQ7Z444 233 aa7.59□□□□□ -1.19
CDH3-208ENST00000569036 NTN5Q8WTR8 489 aaPredicted RBP7.59□□□□□ -1.19
CDH3-208ENST00000569036 TM2D2Q9BX73 214 aa7.59□□□□□ -1.19
CDH3-208ENST00000569036 MAP1LC3AQ9H492 121 aa7.59□□□□□ -1.19
CDH3-208ENST00000569036 TRAV26-1A0A087WT03 109 aa7.58□□□□□ -1.2
CDH3-208ENST00000569036 D6R8Y8 96 aa7.58□□□□□ -1.2
CDH3-208ENST00000569036 H3BUT2 72 aa7.58□□□□□ -1.2
CDH3-208ENST00000569036 MRPS12O15235 138 aaKnown RBP7.58□□□□□ -1.2
CDH3-208ENST00000569036 GNG7O60262 68 aa7.58□□□□□ -1.2
CDH3-208ENST00000569036 RPL7P18124 248 aaKnown RBP7.58□□□□□ -1.2
CDH3-208ENST00000569036 DEFB1P60022 68 aa7.58□□□□□ -1.2
CDH3-208ENST00000569036 SNRPD3P62318 126 aaKnown RBP7.58□□□□□ -1.2
CDH3-208ENST00000569036 CACNG7P62955 275 aa7.58□□□□□ -1.2
CDH3-208ENST00000569036 TWIST1Q15672 202 aa7.58□□□□□ -1.2
CDH3-208ENST00000569036 FOXI2Q6ZQN5 318 aa7.58□□□□□ -1.2
CDH3-208ENST00000569036 MTURNQ8N3F0 131 aa7.58□□□□□ -1.2
CDH3-208ENST00000569036 K7EMI3 77 aa7.57□□□□□ -1.2
CDH3-208ENST00000569036 RS1O15537 224 aa7.57□□□□□ -1.2
CDH3-208ENST00000569036 PRM2P04554 102 aa7.57□□□□□ -1.2
CDH3-208ENST00000569036 IGLC6P0CF74 106 aa7.57□□□□□ -1.2
CDH3-208ENST00000569036 FCER1GP30273 86 aa7.57□□□□□ -1.2
CDH3-208ENST00000569036 IFI27P40305 119 aaPredicted RBP7.57□□□□□ -1.2
CDH3-208ENST00000569036 OR8A1Q8NGG7 326 aa7.57□□□□□ -1.2
CDH3-208ENST00000569036 A0A0J9YY99 117 aa7.56□□□□□ -1.2
CDH3-208ENST00000569036 A0A1B0GV72 72 aa7.56□□□□□ -1.2
CDH3-208ENST00000569036 RBAKDNA6NC62 111 aa7.56□□□□□ -1.2
CDH3-208ENST00000569036 LINC01549A6NIU2 74 aa7.56□□□□□ -1.2
CDH3-208ENST00000569036 IGKV1-17P01599 117 aa7.56□□□□□ -1.2
CDH3-208ENST00000569036 CKS2P33552 79 aa7.56□□□□□ -1.2
CDH3-208ENST00000569036 MRPL51Q4U2R6 128 aaKnown RBP7.56□□□□□ -1.2
CDH3-208ENST00000569036 SAMD13Q5VXD3 122 aa7.56□□□□□ -1.2
CDH3-208ENST00000569036 METTL26Q96S19 204 aa7.56□□□□□ -1.2
CDH3-208ENST00000569036 VGLL1Q99990 258 aa7.56□□□□□ -1.2
CDH3-208ENST00000569036 VCX2Q9H322 139 aa7.56□□□□□ -1.2
CDH3-208ENST00000569036 PLAC8L1A1L4L8 177 aa7.55□□□□□ -1.2
CDH3-208ENST00000569036 DPM2O94777 84 aa7.55□□□□□ -1.2
CDH3-208ENST00000569036 NCR2O95944 276 aa7.55□□□□□ -1.2
CDH3-208ENST00000569036 IGKCP01834 107 aa7.55□□□□□ -1.2
CDH3-208ENST00000569036 ZNF138P52744 262 aa7.55□□□□□ -1.2
CDH3-208ENST00000569036 LYRM7Q5U5X0 104 aa7.55□□□□□ -1.2
CDH3-208ENST00000569036 LYZL1Q6UWQ5 148 aa7.55□□□□□ -1.2
CDH3-208ENST00000569036 ATP6V0E2Q8NHE4 81 aa7.55□□□□□ -1.2
CDH3-208ENST00000569036 GLMPQ8WWB7 406 aa7.55□□□□□ -1.2
CDH3-208ENST00000569036 CLUHP3Q96NS8 147 aa7.55□□□□□ -1.2
CDH3-208ENST00000569036 TRAV8-1A0A0A6YYK1 113 aa7.54□□□□□ -1.2
CDH3-208ENST00000569036 E9PLD3 99 aa7.54□□□□□ -1.2
CDH3-208ENST00000569036 H0Y8G0 127 aa7.54□□□□□ -1.2
CDH3-208ENST00000569036 SH2D1AO60880 128 aa7.54□□□□□ -1.2
CDH3-208ENST00000569036 PLNP26678 52 aa7.54□□□□□ -1.2
CDH3-208ENST00000569036 ODF1Q14990 250 aa7.54□□□□□ -1.2
CDH3-208ENST00000569036 SCXQ7RTU7 201 aa7.54□□□□□ -1.2
CDH3-208ENST00000569036 EXOC3-AS1Q8N2X6 119 aa7.54□□□□□ -1.2
CDH3-208ENST00000569036 Q8N8P6 123 aa7.54□□□□□ -1.2
CDH3-208ENST00000569036 MRPL53Q96EL3 112 aaKnown RBP7.54□□□□□ -1.2
CDH3-208ENST00000569036 SGK494Q96LW2 274 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms