RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-215ENST00000569020 SUMO4Q6EEV6 95 aa8.78□□□□□ -1
CNOT1-215ENST00000569020 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.78□□□□□ -1
CNOT1-215ENST00000569020 A0A1B0GUV1 79 aa8.77□□□□□ -1.01
CNOT1-215ENST00000569020 RASL11AQ6T310 242 aa8.77□□□□□ -1.01
CNOT1-215ENST00000569020 SDIM1Q6ZPB5 146 aa8.77□□□□□ -1.01
CNOT1-215ENST00000569020 C20orf203Q8NBC4 194 aa8.77□□□□□ -1.01
CNOT1-215ENST00000569020 TMEM243Q9BU79 118 aa8.77□□□□□ -1.01
CNOT1-215ENST00000569020 BIN3Q9NQY0 253 aa8.77□□□□□ -1.01
CNOT1-215ENST00000569020 hDV102S1A0JD36 115 aa8.76□□□□□ -1.01
CNOT1-215ENST00000569020 F2Z2F3 143 aa8.76□□□□□ -1.01
CNOT1-215ENST00000569020 K7EN84 100 aa8.76□□□□□ -1.01
CNOT1-215ENST00000569020 UBE2L6O14933 153 aa8.76□□□□□ -1.01
CNOT1-215ENST00000569020 TRGC1P0CF51 173 aa8.76□□□□□ -1.01
CNOT1-215ENST00000569020 DPH3P1Q9H4G8 78 aa8.76□□□□□ -1.01
CNOT1-215ENST00000569020 AP5S1Q9NUS5 200 aa8.76□□□□□ -1.01
CNOT1-215ENST00000569020 PLA2G2DQ9UNK4 145 aa8.76□□□□□ -1.01
CNOT1-215ENST00000569020 LRP1Q07954 4544 aaKnown RBP8.76□□□□□ -1.01
CNOT1-215ENST00000569020 IGLV4-60A0A075B6I1 120 aa8.75□□□□□ -1.01
CNOT1-215ENST00000569020 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.75□□□□□ -1.01
CNOT1-215ENST00000569020 TMEM250H0YL14 139 aa8.75□□□□□ -1.01
CNOT1-215ENST00000569020 PANO1I0J062 215 aa8.75□□□□□ -1.01
CNOT1-215ENST00000569020 HNRNPA3P51991 378 aaKnown RBP8.75□□□□□ -1.01
CNOT1-215ENST00000569020 CNBPP62633 177 aaKnown RBP8.75□□□□□ -1.01
CNOT1-215ENST00000569020 PGLYRP4Q96LB8 373 aa8.75□□□□□ -1.01
CNOT1-215ENST00000569020 NIT2Q9NQR4 276 aa8.75□□□□□ -1.01
CNOT1-215ENST00000569020 IGHV3-64A0A075B6Q5 118 aa8.74□□□□□ -1.01
CNOT1-215ENST00000569020 NTF3P20783 257 aa8.74□□□□□ -1.01
CNOT1-215ENST00000569020 WDR73Q6P4I2 378 aa8.74□□□□□ -1.01
CNOT1-215ENST00000569020 NUDT10Q8NFP7 164 aa8.74□□□□□ -1.01
CNOT1-215ENST00000569020 OCC1Q8TAD7 63 aa8.74□□□□□ -1.01
CNOT1-215ENST00000569020 DPH3Q96FX2 82 aa8.74□□□□□ -1.01
CNOT1-215ENST00000569020 NUDT11Q96G61 164 aa8.74□□□□□ -1.01
CNOT1-215ENST00000569020 RNASE7Q9H1E1 156 aaKnown RBP8.74□□□□□ -1.01
CNOT1-215ENST00000569020 AMTP48728 403 aa8.73□□□□□ -1.01
CNOT1-215ENST00000569020 CIRBPQ14011 172 aaKnown RBP8.73□□□□□ -1.01
CNOT1-215ENST00000569020 COTL1Q14019 142 aa8.73□□□□□ -1.01
CNOT1-215ENST00000569020 LYZL1Q6UWQ5 148 aa8.73□□□□□ -1.01
CNOT1-215ENST00000569020 FAT3Q8TDW7 4589 aa8.73□□□□□ -1.01
CNOT1-215ENST00000569020 CTRLP40313 264 aa8.72□□□□□ -1.01
CNOT1-215ENST00000569020 Q6ZRU5 148 aa8.72□□□□□ -1.01
CNOT1-215ENST00000569020 FAM210AQ96ND0 272 aa8.72□□□□□ -1.01
CNOT1-215ENST00000569020 GFRA4Q9GZZ7 299 aa8.72□□□□□ -1.01
CNOT1-215ENST00000569020 RPP21Q9H633 154 aaKnown RBP8.72□□□□□ -1.01
CNOT1-215ENST00000569020 NDUFS6O75380 124 aaKnown RBP8.71□□□□□ -1.02
CNOT1-215ENST00000569020 XP32Q5T750 250 aa8.71□□□□□ -1.02
CNOT1-215ENST00000569020 RNF185Q96GF1 192 aa8.71□□□□□ -1.02
CNOT1-215ENST00000569020 CNFNQ9BYD5 112 aa8.71□□□□□ -1.02
CNOT1-215ENST00000569020 EIF5A2Q9GZV4 153 aaKnown RBP8.71□□□□□ -1.02
CNOT1-215ENST00000569020 A0A087WYN8 130 aa8.7□□□□□ -1.02
CNOT1-215ENST00000569020 CEBPGP53567 150 aa8.7□□□□□ -1.02
CNOT1-215ENST00000569020 TWIST1Q15672 202 aa8.7□□□□□ -1.02
CNOT1-215ENST00000569020 CFAP161Q6P656 301 aa8.7□□□□□ -1.02
CNOT1-215ENST00000569020 PKHD1L1Q86WI1 4243 aa8.69□□□□□ -1.02
CNOT1-215ENST00000569020 IGKV3OR2-268A0A0C4DH90 116 aa8.69□□□□□ -1.02
CNOT1-215ENST00000569020 SLPIP03973 132 aa8.69□□□□□ -1.02
CNOT1-215ENST00000569020 SRP19P09132 144 aaKnown RBP8.69□□□□□ -1.02
CNOT1-215ENST00000569020 FAM231DQ6ZW35 169 aa8.69□□□□□ -1.02
CNOT1-215ENST00000569020 GTSF1Q8WW33 167 aa8.69□□□□□ -1.02
CNOT1-215ENST00000569020 HMCN2Q8NDA2 5059 aa8.69□□□□□ -1.02
CNOT1-215ENST00000569020 GAGE12HA6NDE8 117 aa8.68□□□□□ -1.02
CNOT1-215ENST00000569020 GATCO43716 136 aaKnown RBP8.68□□□□□ -1.02
CNOT1-215ENST00000569020 CHTF8P0CG12 524 aa8.68□□□□□ -1.02
CNOT1-215ENST00000569020 AMMECR1LQ6DCA0 310 aa8.68□□□□□ -1.02
CNOT1-215ENST00000569020 SPACA4Q8TDM5 124 aa8.68□□□□□ -1.02
CNOT1-215ENST00000569020 SMIM7Q9BQ49 75 aa8.68□□□□□ -1.02
CNOT1-215ENST00000569020 TEX261Q6UWH6 196 aa8.67□□□□□ -1.02
CNOT1-215ENST00000569020 SMIM15Q7Z3B0 74 aa8.67□□□□□ -1.02
CNOT1-215ENST00000569020 LINC01551Q86U37 167 aa8.67□□□□□ -1.02
CNOT1-215ENST00000569020 C15orf56Q8N910 161 aa8.67□□□□□ -1.02
CNOT1-215ENST00000569020 GATD1Q8NB37 220 aa8.67□□□□□ -1.02
CNOT1-215ENST00000569020 TRAV26-2A0A0B4J265 109 aa8.66□□□□□ -1.02
CNOT1-215ENST00000569020 ZNF727A8MUV8 499 aa8.66□□□□□ -1.02
CNOT1-215ENST00000569020 H7C423 109 aa8.66□□□□□ -1.02
CNOT1-215ENST00000569020 NCR2O95944 276 aa8.66□□□□□ -1.02
CNOT1-215ENST00000569020 RPS10P46783 165 aaKnown RBP8.66□□□□□ -1.02
CNOT1-215ENST00000569020 CT83Q5H943 113 aa8.66□□□□□ -1.02
CNOT1-215ENST00000569020 RNASEKQ6P5S7 137 aaKnown RBP8.66□□□□□ -1.02
CNOT1-215ENST00000569020 C7orf33Q8WU49 177 aa8.66□□□□□ -1.02
CNOT1-215ENST00000569020 A8MWL6 223 aa8.65□□□□□ -1.02
CNOT1-215ENST00000569020 APCSP02743 223 aa8.65□□□□□ -1.02
CNOT1-215ENST00000569020 MT1HL1P0DM35 61 aa8.65□□□□□ -1.02
CNOT1-215ENST00000569020 COX6A2Q02221 97 aa8.65□□□□□ -1.02
CNOT1-215ENST00000569020 HIGD2BQ4VC39 106 aa8.65□□□□□ -1.02
CNOT1-215ENST00000569020 CHCHD10Q8WYQ3 142 aaPredicted RBP8.65□□□□□ -1.02
CNOT1-215ENST00000569020 PLAC8Q9NZF1 115 aa8.65□□□□□ -1.02
CNOT1-215ENST00000569020 PHOX2AO14813 284 aa8.64□□□□□ -1.03
CNOT1-215ENST00000569020 RPL39LQ96EH5 51 aaKnown RBP8.64□□□□□ -1.03
CNOT1-215ENST00000569020 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.63□□□□□ -1.03
CNOT1-215ENST00000569020 IGKV2-29A2NJV5 120 aaPredicted RBP8.63□□□□□ -1.03
CNOT1-215ENST00000569020 C9JQL5 133 aa8.63□□□□□ -1.03
CNOT1-215ENST00000569020 FOXA3P55318 350 aaPredicted RBP8.63□□□□□ -1.03
CNOT1-215ENST00000569020 MAJINQ3KP22 176 aa8.63□□□□□ -1.03
CNOT1-215ENST00000569020 OSTCQ9NRP0 149 aa8.63□□□□□ -1.03
CNOT1-215ENST00000569020 IGKV2-24A0A0C4DH68 120 aa8.62□□□□□ -1.03
CNOT1-215ENST00000569020 SDHAF1A6NFY7 115 aa8.62□□□□□ -1.03
CNOT1-215ENST00000569020 FGF6P10767 208 aa8.62□□□□□ -1.03
CNOT1-215ENST00000569020 ZNF25P17030 456 aaPredicted RBP8.62□□□□□ -1.03
CNOT1-215ENST00000569020 SRSF3P84103 164 aaKnown RBP8.62□□□□□ -1.03
CNOT1-215ENST00000569020 OR5A1Q8NGJ0 315 aa8.62□□□□□ -1.03
CNOT1-215ENST00000569020 PRSS3P2Q8NHM4 247 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms