RNA–Protein interactions for RNA: ENST00000568744.1

CYLD-213, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 2

Gene CYLD, Length 370 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-213ENST00000568744 PXDNQ92626 1479 aa-0.29□□□□□ -2.46
CYLD-213ENST00000568744 NWD2Q9ULI1 1742 aa-0.29□□□□□ -2.46
CYLD-213ENST00000568744 TRAV13-2A0A0B4J235 113 aa-0.29□□□□□ -2.46
CYLD-213ENST00000568744 PIGBOS1A0A0B4J2F0 54 aa-0.29□□□□□ -2.46
CYLD-213ENST00000568744 HCG22E2RYF7 251 aa-0.29□□□□□ -2.46
CYLD-213ENST00000568744 HIST1H1DP16402 221 aaKnown RBP-0.29□□□□□ -2.46
CYLD-213ENST00000568744 AQP10Q96PS8 301 aa-0.29□□□□□ -2.46
CYLD-213ENST00000568744 SPCS1Q9Y6A9 102 aa-0.29□□□□□ -2.46
CYLD-213ENST00000568744 PTPRQQ9UMZ3 2332 aa-0.29□□□□□ -2.46
CYLD-213ENST00000568744 SPEF2Q9C093 1822 aa-0.29□□□□□ -2.46
CYLD-213ENST00000568744 PTPN13Q12923 2485 aa-0.29□□□□□ -2.46
CYLD-213ENST00000568744 ARPC4P59998 168 aa-0.3□□□□□ -2.46
CYLD-213ENST00000568744 RBM3P98179 157 aaKnown RBP-0.3□□□□□ -2.46
CYLD-213ENST00000568744 NSD1Q96L73 2696 aaPredicted RBP-0.3□□□□□ -2.46
CYLD-213ENST00000568744 GRIN2AQ12879 1464 aa-0.3□□□□□ -2.46
CYLD-213ENST00000568744 CTXND1A0A1B0GTU2 59 aa-0.31□□□□□ -2.46
CYLD-213ENST00000568744 SPAARA0A1B0GVQ0 90 aa-0.31□□□□□ -2.46
CYLD-213ENST00000568744 M0R135 149 aa-0.31□□□□□ -2.46
CYLD-213ENST00000568744 C10orf128Q5T292 105 aa-0.31□□□□□ -2.46
CYLD-213ENST00000568744 Q8IZM0 81 aa-0.31□□□□□ -2.46
CYLD-213ENST00000568744 COPS9Q8WXC6 57 aa-0.31□□□□□ -2.46
CYLD-213ENST00000568744 PAIP2BQ9ULR5 123 aaKnown RBP-0.31□□□□□ -2.46
CYLD-213ENST00000568744 MRC1P22897 1456 aa-0.31□□□□□ -2.46
CYLD-213ENST00000568744 PRDM2Q13029 1718 aa-0.32□□□□□ -2.46
CYLD-213ENST00000568744 HAMPP81172 84 aa-0.32□□□□□ -2.46
CYLD-213ENST00000568744 SMIM4Q8WVI0 70 aa-0.32□□□□□ -2.46
CYLD-213ENST00000568744 ZNF292O60281 2723 aa-0.32□□□□□ -2.46
CYLD-213ENST00000568744 C2CD3Q4AC94 2353 aa-0.33□□□□□ -2.46
CYLD-213ENST00000568744 BCE1O60756 84 aa-0.33□□□□□ -2.46
CYLD-213ENST00000568744 S100A3P33764 101 aa-0.33□□□□□ -2.46
CYLD-213ENST00000568744 Q5VSD8 79 aa-0.33□□□□□ -2.46
CYLD-213ENST00000568744 TTC9CQ8N5M4 171 aa-0.33□□□□□ -2.46
CYLD-213ENST00000568744 AGPAT4-IT1Q9H0P7 198 aa-0.33□□□□□ -2.46
CYLD-213ENST00000568744 V9GYH0 126 aa-0.33□□□□□ -2.46
CYLD-213ENST00000568744 DOPEY2Q9Y3R5 2298 aa-0.33□□□□□ -2.46
CYLD-213ENST00000568744 PKDREJQ9NTG1 2253 aa-0.34□□□□□ -2.46
CYLD-213ENST00000568744 SPAG11BQ08648 103 aa-0.34□□□□□ -2.46
CYLD-213ENST00000568744 C12orf73Q69YU5 71 aa-0.34□□□□□ -2.46
CYLD-213ENST00000568744 SPAG11AQ6PDA7 123 aa-0.34□□□□□ -2.46
CYLD-213ENST00000568744 LENEPQ9Y5L5 61 aa-0.34□□□□□ -2.46
CYLD-213ENST00000568744 CFTRP13569 1480 aa-0.35□□□□□ -2.46
CYLD-213ENST00000568744 Q8N8P6 123 aa-0.35□□□□□ -2.47
CYLD-213ENST00000568744 LRP6O75581 1613 aa-0.35□□□□□ -2.47
CYLD-213ENST00000568744 ERCC6L2Q5T890 1561 aa-0.36□□□□□ -2.47
CYLD-213ENST00000568744 PPRC1Q5VV67 1664 aaKnown RBP-0.36□□□□□ -2.47
CYLD-213ENST00000568744 KDM3BQ7LBC6 1761 aa-0.36□□□□□ -2.47
CYLD-213ENST00000568744 FAM25AB3EWG3 89 aa-0.36□□□□□ -2.47
CYLD-213ENST00000568744 FAM25CB3EWG5 89 aa-0.36□□□□□ -2.47
CYLD-213ENST00000568744 FAM25GB3EWG6 89 aa-0.36□□□□□ -2.47
CYLD-213ENST00000568744 LSM10Q969L4 123 aaKnown RBP-0.36□□□□□ -2.47
CYLD-213ENST00000568744 SERP1Q9Y6X1 66 aa-0.36□□□□□ -2.47
CYLD-213ENST00000568744 ARAP2Q8WZ64 1704 aa-0.36□□□□□ -2.47
CYLD-213ENST00000568744 WNK3Q9BYP7 1800 aa-0.36□□□□□ -2.47
CYLD-213ENST00000568744 MYH8P13535 1937 aa-0.36□□□□□ -2.47
CYLD-213ENST00000568744 BICRAQ9NZM4 1560 aa-0.36□□□□□ -2.47
CYLD-213ENST00000568744 PPIP5K1Q6PFW1 1433 aa-0.37□□□□□ -2.47
CYLD-213ENST00000568744 TENM4Q6N022 2769 aa-0.37□□□□□ -2.47
CYLD-213ENST00000568744 SPRR1AP35321 89 aa-0.37□□□□□ -2.47
CYLD-213ENST00000568744 COX17Q14061 63 aa-0.37□□□□□ -2.47
CYLD-213ENST00000568744 Q6AWC8 147 aa-0.37□□□□□ -2.47
CYLD-213ENST00000568744 ARL11Q969Q4 196 aa-0.37□□□□□ -2.47
CYLD-213ENST00000568744 RERGLQ9H628 205 aa-0.37□□□□□ -2.47
CYLD-213ENST00000568744 TP53AIP1Q9HCN2 124 aa-0.37□□□□□ -2.47
CYLD-213ENST00000568744 HMCN2Q8NDA2 5059 aa-0.38□□□□□ -2.47
CYLD-213ENST00000568744 FXYD6-FXYD2A0A087WZ82 144 aa-0.38□□□□□ -2.47
CYLD-213ENST00000568744 TMEM170BQ5T4T1 132 aa-0.38□□□□□ -2.47
CYLD-213ENST00000568744 SNRNP25Q9BV90 132 aaKnown RBP-0.38□□□□□ -2.47
CYLD-213ENST00000568744 LRRC37A2A6NM11 1700 aa-0.38□□□□□ -2.47
CYLD-213ENST00000568744 PLCE1Q9P212 2302 aa-0.39□□□□□ -2.47
CYLD-213ENST00000568744 SELENOWP63302 87 aa-0.39□□□□□ -2.47
CYLD-213ENST00000568744 DCDP81605 110 aaKnown RBP-0.39□□□□□ -2.47
CYLD-213ENST00000568744 LINC00470Q9BZP3 86 aa-0.39□□□□□ -2.47
CYLD-213ENST00000568744 PLXNB2O15031 1838 aa-0.39□□□□□ -2.47
CYLD-213ENST00000568744 LAMC1P11047 1609 aa-0.39□□□□□ -2.47
CYLD-213ENST00000568744 C10orf71Q711Q0 1435 aa-0.39□□□□□ -2.47
CYLD-213ENST00000568744 GNG7O60262 68 aa-0.4□□□□□ -2.47
CYLD-213ENST00000568744 SPRR2DP22532 72 aa-0.4□□□□□ -2.47
CYLD-213ENST00000568744 CCDC58Q4VC31 144 aa-0.4□□□□□ -2.47
CYLD-213ENST00000568744 MEIG1Q5JSS6 88 aa-0.4□□□□□ -2.47
CYLD-213ENST00000568744 AMELXQ99217 191 aa-0.4□□□□□ -2.47
CYLD-213ENST00000568744 NAA60Q9H7X0 242 aa-0.4□□□□□ -2.47
CYLD-213ENST00000568744 DOCK1Q14185 1865 aa-0.41□□□□□ -2.47
CYLD-213ENST00000568744 Q6JHZ5 121 aa-0.41□□□□□ -2.48
CYLD-213ENST00000568744 BAGE2Q86Y30 109 aa-0.41□□□□□ -2.48
CYLD-213ENST00000568744 NDUFA4L2Q9NRX3 87 aa-0.41□□□□□ -2.48
CYLD-213ENST00000568744 ZNF236Q9UL36 1845 aa-0.41□□□□□ -2.48
CYLD-213ENST00000568744 PI4KAP42356 2102 aa-0.41□□□□□ -2.48
CYLD-213ENST00000568744 PATJQ8NI35 1801 aa-0.42□□□□□ -2.48
CYLD-213ENST00000568744 MIF4GDA9UHW6 222 aaKnown RBP-0.42□□□□□ -2.48
CYLD-213ENST00000568744 F8VRH5 84 aa-0.42□□□□□ -2.48
CYLD-213ENST00000568744 I3L2K1 104 aa-0.42□□□□□ -2.48
CYLD-213ENST00000568744 APOC3P02656 99 aa-0.42□□□□□ -2.48
CYLD-213ENST00000568744 KRTAP6-1Q3LI64 71 aa-0.42□□□□□ -2.48
CYLD-213ENST00000568744 CSMD3Q7Z407 3707 aa-0.42□□□□□ -2.48
CYLD-213ENST00000568744 TRBV6-1A0A0K0K1D8 114 aa-0.43□□□□□ -2.48
CYLD-213ENST00000568744 UQCR11O14957 56 aa-0.43□□□□□ -2.48
CYLD-213ENST00000568744 PRM1P04553 51 aa-0.43□□□□□ -2.48
CYLD-213ENST00000568744 PPP3R2Q96LZ3 170 aa-0.43□□□□□ -2.48
CYLD-213ENST00000568744 MGST2Q99735 147 aa-0.43□□□□□ -2.48
CYLD-213ENST00000568744 DYNLRB1Q9NP97 96 aa-0.43□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms