RNA–Protein interactions for RNA: ENST00000568651.1

HERPUD1-214, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 458 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-214ENST00000568651 PXMP4Q9Y6I8 212 aa3.69□□□□□ -1.82
HERPUD1-214ENST00000568651 GGTLC3B5MD39 225 aa3.68□□□□□ -1.82
HERPUD1-214ENST00000568651 C9JQL5 133 aa3.68□□□□□ -1.82
HERPUD1-214ENST00000568651 SYNGR2O43760 224 aa3.68□□□□□ -1.82
HERPUD1-214ENST00000568651 PFN1P07737 140 aaKnown RBP3.68□□□□□ -1.82
HERPUD1-214ENST00000568651 KRTAP12-2P59991 146 aa3.68□□□□□ -1.82
HERPUD1-214ENST00000568651 NCS1P62166 190 aa3.68□□□□□ -1.82
HERPUD1-214ENST00000568651 POLR2GP62487 172 aaKnown RBP eCLIP3.68□□□□□ -1.82
HERPUD1-214ENST00000568651 C10orf113Q5VZT2 155 aa3.68□□□□□ -1.82
HERPUD1-214ENST00000568651 FAM104BQ5XKR9 115 aa3.68□□□□□ -1.82
HERPUD1-214ENST00000568651 S100A7AQ86SG5 101 aa3.68□□□□□ -1.82
HERPUD1-214ENST00000568651 CLVS1Q8IUQ0 354 aaPredicted RBP3.68□□□□□ -1.82
HERPUD1-214ENST00000568651 EXOC3-AS1Q8N2X6 119 aa3.68□□□□□ -1.82
HERPUD1-214ENST00000568651 ST20-AS1Q8NBB2 130 aa3.68□□□□□ -1.82
HERPUD1-214ENST00000568651 UBE2WQ96B02 151 aa3.68□□□□□ -1.82
HERPUD1-214ENST00000568651 CIB3Q96Q77 187 aaPredicted RBP3.68□□□□□ -1.82
HERPUD1-214ENST00000568651 SRRQ9GZT4 340 aa3.68□□□□□ -1.82
HERPUD1-214ENST00000568651 FABP12A6NFH5 140 aa3.67□□□□□ -1.82
HERPUD1-214ENST00000568651 GNRH2O43555 120 aa3.67□□□□□ -1.82
HERPUD1-214ENST00000568651 METTL15P1P0C7V9 234 aa3.67□□□□□ -1.82
HERPUD1-214ENST00000568651 SURF2Q15527 256 aaPredicted RBP3.67□□□□□ -1.82
HERPUD1-214ENST00000568651 TMEM78Q5T7P6 136 aa3.67□□□□□ -1.82
HERPUD1-214ENST00000568651 RMI2Q96E14 147 aa3.67□□□□□ -1.82
HERPUD1-214ENST00000568651 DPH3Q96FX2 82 aa3.67□□□□□ -1.82
HERPUD1-214ENST00000568651 PRADC1Q9BSG0 188 aa3.67□□□□□ -1.82
HERPUD1-214ENST00000568651 GTSF1LQ9H1H1 148 aa3.67□□□□□ -1.82
HERPUD1-214ENST00000568651 PSENENQ9NZ42 101 aa3.67□□□□□ -1.82
HERPUD1-214ENST00000568651 TRAV8-1A0A0A6YYK1 113 aa3.66□□□□□ -1.82
HERPUD1-214ENST00000568651 A0A0D9SG52 128 aa3.66□□□□□ -1.82
HERPUD1-214ENST00000568651 SSSCA1O60232 199 aa3.66□□□□□ -1.82
HERPUD1-214ENST00000568651 AKAIN1P0CW23 69 aa3.66□□□□□ -1.82
HERPUD1-214ENST00000568651 PYYP10082 97 aa3.66□□□□□ -1.82
HERPUD1-214ENST00000568651 NTF3P20783 257 aa3.66□□□□□ -1.82
HERPUD1-214ENST00000568651 VBP1P61758 197 aa3.66□□□□□ -1.82
HERPUD1-214ENST00000568651 RHOHQ15669 191 aa3.66□□□□□ -1.82
HERPUD1-214ENST00000568651 MIC13Q5XKP0 118 aa3.66□□□□□ -1.82
HERPUD1-214ENST00000568651 YIPF6Q96EC8 236 aa3.66□□□□□ -1.82
HERPUD1-214ENST00000568651 LINC01600Q96MT4 127 aa3.66□□□□□ -1.82
HERPUD1-214ENST00000568651 MGST2Q99735 147 aa3.66□□□□□ -1.82
HERPUD1-214ENST00000568651 PRRT1Q99946 306 aa3.66□□□□□ -1.82
HERPUD1-214ENST00000568651 NPVFQ9HCQ7 196 aa3.66□□□□□ -1.82
HERPUD1-214ENST00000568651 ZNF492Q9P255 531 aa3.66□□□□□ -1.82
HERPUD1-214ENST00000568651 TIMM9Q9Y5J7 89 aa3.66□□□□□ -1.82
HERPUD1-214ENST00000568651 FAT4Q6V0I7 4981 aa3.66□□□□□ -1.82
HERPUD1-214ENST00000568651 TRBV19A0A075B6N1 114 aa3.65□□□□□ -1.83
HERPUD1-214ENST00000568651 LOC389332A0A1B0GUA5 103 aa3.65□□□□□ -1.83
HERPUD1-214ENST00000568651 M0R2P5 195 aa3.65□□□□□ -1.83
HERPUD1-214ENST00000568651 OR10J4P0C629 311 aa3.65□□□□□ -1.83
HERPUD1-214ENST00000568651 HIST1H1EP10412 219 aaKnown RBP3.65□□□□□ -1.83
HERPUD1-214ENST00000568651 DPPA3Q6W0C5 159 aa3.65□□□□□ -1.83
HERPUD1-214ENST00000568651 ZC2HC1AQ96GY0 325 aa3.65□□□□□ -1.83
HERPUD1-214ENST00000568651 VCX3BQ9H321 246 aa3.65□□□□□ -1.83
HERPUD1-214ENST00000568651 SND1-IT1Q9HBX3 110 aa3.65□□□□□ -1.83
HERPUD1-214ENST00000568651 CYTL1Q9NRR1 136 aa3.65□□□□□ -1.83
HERPUD1-214ENST00000568651 URGCP-MRPS24S4R325 110 aa3.65□□□□□ -1.83
HERPUD1-214ENST00000568651 MUC2Q02817 5179 aa3.64□□□□□ -1.83
HERPUD1-214ENST00000568651 A0A1B0GXF2 115 aa3.64□□□□□ -1.83
HERPUD1-214ENST00000568651 TYMSP04818 313 aa3.64□□□□□ -1.83
HERPUD1-214ENST00000568651 GUK1Q16774 197 aa3.64□□□□□ -1.83
HERPUD1-214ENST00000568651 C2orf50Q96LR7 162 aa3.64□□□□□ -1.83
HERPUD1-214ENST00000568651 MARVELD1Q9BSK0 173 aa3.64□□□□□ -1.83
HERPUD1-214ENST00000568651 SCP2D1Q9UJQ7 156 aa3.64□□□□□ -1.83
HERPUD1-214ENST00000568651 TRBV6-4A0A1B0GX49 114 aa3.63□□□□□ -1.83
HERPUD1-214ENST00000568651 DUXBA0A1W2PPF3 345 aa3.63□□□□□ -1.83
HERPUD1-214ENST00000568651 F6UZH7 168 aa3.63□□□□□ -1.83
HERPUD1-214ENST00000568651 K7EPK0 472 aa3.63□□□□□ -1.83
HERPUD1-214ENST00000568651 RGS5O15539 181 aa3.63□□□□□ -1.83
HERPUD1-214ENST00000568651 SLC25A6P12236 298 aa3.63□□□□□ -1.83
HERPUD1-214ENST00000568651 KRTAP10-8P60410 259 aa3.63□□□□□ -1.83
HERPUD1-214ENST00000568651 RAB31Q13636 194 aa3.63□□□□□ -1.83
HERPUD1-214ENST00000568651 CFAP126Q5VTH2 177 aa3.63□□□□□ -1.83
HERPUD1-214ENST00000568651 TMEM14EPQ6UXP3 125 aa3.63□□□□□ -1.83
HERPUD1-214ENST00000568651 PRNTQ86SH4 94 aa3.63□□□□□ -1.83
HERPUD1-214ENST00000568651 MIR7-3HGQ8N6C7 128 aa3.63□□□□□ -1.83
HERPUD1-214ENST00000568651 OR2T35Q8NGX2 323 aa3.63□□□□□ -1.83
HERPUD1-214ENST00000568651 MIXL1Q9H2W2 232 aa3.63□□□□□ -1.83
HERPUD1-214ENST00000568651 PRELID1Q9Y255 219 aa3.63□□□□□ -1.83
HERPUD1-214ENST00000568651 COLCA2A8K830 154 aa3.62□□□□□ -1.83
HERPUD1-214ENST00000568651 TMEM262E9PQX1 116 aa3.62□□□□□ -1.83
HERPUD1-214ENST00000568651 SFT2D2O95562 160 aa3.62□□□□□ -1.83
HERPUD1-214ENST00000568651 NMBP08949 121 aa3.62□□□□□ -1.83
HERPUD1-214ENST00000568651 PPP1R1AQ13522 171 aa3.62□□□□□ -1.83
HERPUD1-214ENST00000568651 SDIM1Q6ZPB5 146 aa3.62□□□□□ -1.83
HERPUD1-214ENST00000568651 NIT1Q86X76 327 aa3.62□□□□□ -1.83
HERPUD1-214ENST00000568651 C9orf163Q8N9P6 203 aa3.62□□□□□ -1.83
HERPUD1-214ENST00000568651 SMIM4Q8WVI0 70 aa3.62□□□□□ -1.83
HERPUD1-214ENST00000568651 AP3S1Q92572 193 aa3.62□□□□□ -1.83
HERPUD1-214ENST00000568651 YPEL4Q96NS1 127 aa3.62□□□□□ -1.83
HERPUD1-214ENST00000568651 A0A087WX48 190 aa3.61□□□□□ -1.83
HERPUD1-214ENST00000568651 UBE2L5PA0A1B0GUS4 154 aa3.61□□□□□ -1.83
HERPUD1-214ENST00000568651 PGPA6NDG6 321 aa3.61□□□□□ -1.83
HERPUD1-214ENST00000568651 CRPP02741 224 aa3.61□□□□□ -1.83
HERPUD1-214ENST00000568651 SSBP1Q04837 148 aaKnown RBP3.61□□□□□ -1.83
HERPUD1-214ENST00000568651 MOBPQ13875 183 aa3.61□□□□□ -1.83
HERPUD1-214ENST00000568651 Q6AWC8 147 aa3.61□□□□□ -1.83
HERPUD1-214ENST00000568651 CLPSL2Q6UWE3 100 aa3.61□□□□□ -1.83
HERPUD1-214ENST00000568651 MIR17HGQ75NE6 70 aa3.61□□□□□ -1.83
HERPUD1-214ENST00000568651 MCFD2Q8NI22 146 aa3.61□□□□□ -1.83
HERPUD1-214ENST00000568651 DEDD2Q8WXF8 326 aa3.61□□□□□ -1.83
HERPUD1-214ENST00000568651 HYLS1Q96M11 299 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms