RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 NKX2-5P52952 324 aaPredicted RBP7.33□□□□□ -1.24
CDH3-206ENST00000567674 Q5VSD8 79 aa7.33□□□□□ -1.24
CDH3-206ENST00000567674 GTSF1Q8WW33 167 aa7.33□□□□□ -1.24
CDH3-206ENST00000567674 SMIM7Q9BQ49 75 aa7.33□□□□□ -1.24
CDH3-206ENST00000567674 A0A1B0GUT8 65 aa7.32□□□□□ -1.24
CDH3-206ENST00000567674 UBE2L6O14933 153 aa7.32□□□□□ -1.24
CDH3-206ENST00000567674 PLA2G1BP04054 148 aaKnown RBP7.32□□□□□ -1.24
CDH3-206ENST00000567674 ZNF25P17030 456 aaPredicted RBP7.32□□□□□ -1.24
CDH3-206ENST00000567674 SSTP61278 116 aa7.32□□□□□ -1.24
CDH3-206ENST00000567674 REG3AQ06141 175 aa7.32□□□□□ -1.24
CDH3-206ENST00000567674 WFDC2Q14508 124 aa7.32□□□□□ -1.24
CDH3-206ENST00000567674 LINC00269Q8N2A0 174 aa7.32□□□□□ -1.24
CDH3-206ENST00000567674 GATD1Q8NB37 220 aa7.32□□□□□ -1.24
CDH3-206ENST00000567674 TMEM191AQ9H0A3 160 aa7.32□□□□□ -1.24
CDH3-206ENST00000567674 A0A1B0GW15 77 aa7.31□□□□□ -1.24
CDH3-206ENST00000567674 ZNF727A8MUV8 499 aa7.31□□□□□ -1.24
CDH3-206ENST00000567674 TMEM241Q24JQ0 296 aa7.31□□□□□ -1.24
CDH3-206ENST00000567674 KRTAP26-1Q6PEX3 210 aa7.31□□□□□ -1.24
CDH3-206ENST00000567674 C20orf203Q8NBC4 194 aa7.31□□□□□ -1.24
CDH3-206ENST00000567674 CHAC1Q9BUX1 264 aa7.31□□□□□ -1.24
CDH3-206ENST00000567674 MYCBP2O75592 4640 aa7.31□□□□□ -1.24
CDH3-206ENST00000567674 hCG_2014768A0A024R1R8 64 aa7.3□□□□□ -1.24
CDH3-206ENST00000567674 SRP19P09132 144 aaKnown RBP7.3□□□□□ -1.24
CDH3-206ENST00000567674 FUSP35637 526 aaKnown RBP eCLIP7.3□□□□□ -1.24
CDH3-206ENST00000567674 AMTP48728 403 aa7.3□□□□□ -1.24
CDH3-206ENST00000567674 CNBPP62633 177 aaKnown RBP7.3□□□□□ -1.24
CDH3-206ENST00000567674 SMAGPQ0VAQ4 97 aa7.3□□□□□ -1.24
CDH3-206ENST00000567674 GAGE6Q13070 117 aa7.3□□□□□ -1.24
CDH3-206ENST00000567674 PEA15Q15121 130 aa7.3□□□□□ -1.24
CDH3-206ENST00000567674 CFAP161Q6P656 301 aa7.3□□□□□ -1.24
CDH3-206ENST00000567674 C9orf163Q8N9P6 203 aa7.3□□□□□ -1.24
CDH3-206ENST00000567674 MRAP2Q96G30 205 aa7.3□□□□□ -1.24
CDH3-206ENST00000567674 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.29□□□□□ -1.24
CDH3-206ENST00000567674 HIGD1CA8MV81 97 aa7.29□□□□□ -1.24
CDH3-206ENST00000567674 USP17L23D6RBM5 183 aa7.29□□□□□ -1.24
CDH3-206ENST00000567674 I3L3M4 83 aa7.29□□□□□ -1.24
CDH3-206ENST00000567674 J3QL48 77 aa7.29□□□□□ -1.24
CDH3-206ENST00000567674 LECT2O14960 151 aa7.29□□□□□ -1.24
CDH3-206ENST00000567674 TCAPO15273 167 aa7.29□□□□□ -1.24
CDH3-206ENST00000567674 CCL25O15444 150 aa7.29□□□□□ -1.24
CDH3-206ENST00000567674 RIGQ13278 110 aa7.29□□□□□ -1.24
CDH3-206ENST00000567674 FAM30AQ9NZY2 134 aa7.29□□□□□ -1.24
CDH3-206ENST00000567674 NAT8BQ9UHF3 227 aa7.29□□□□□ -1.24
CDH3-206ENST00000567674 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.28□□□□□ -1.24
CDH3-206ENST00000567674 TRBV27A0A0K0K1C4 114 aa7.28□□□□□ -1.24
CDH3-206ENST00000567674 SDHAF1A6NFY7 115 aa7.28□□□□□ -1.24
CDH3-206ENST00000567674 LINC00862A6NCI5 91 aa7.27□□□□□ -1.25
CDH3-206ENST00000567674 PPP1R2P9O14990 202 aa7.27□□□□□ -1.25
CDH3-206ENST00000567674 APCSP02743 223 aa7.27□□□□□ -1.25
CDH3-206ENST00000567674 PMCHP20382 165 aa7.27□□□□□ -1.25
CDH3-206ENST00000567674 POLR2KP53803 58 aaKnown RBP7.27□□□□□ -1.25
CDH3-206ENST00000567674 SERTAD4-AS1Q5TG53 156 aa7.27□□□□□ -1.25
CDH3-206ENST00000567674 MRPL52Q86TS9 123 aaKnown RBP7.27□□□□□ -1.25
CDH3-206ENST00000567674 DEFB104AQ8WTQ1 72 aa7.27□□□□□ -1.25
CDH3-206ENST00000567674 ISOC2Q96AB3 205 aa7.27□□□□□ -1.25
CDH3-206ENST00000567674 RNF185Q96GF1 192 aa7.27□□□□□ -1.25
CDH3-206ENST00000567674 ST20Q9HBF5 79 aa7.27□□□□□ -1.25
CDH3-206ENST00000567674 NAT8Q9UHE5 227 aa7.27□□□□□ -1.25
CDH3-206ENST00000567674 PKIGQ9Y2B9 76 aa7.27□□□□□ -1.25
CDH3-206ENST00000567674 CSDC2Q9Y534 153 aaKnown RBP7.27□□□□□ -1.25
CDH3-206ENST00000567674 V9GYV3 84 aa7.27□□□□□ -1.25
CDH3-206ENST00000567674 IGLV4-60A0A075B6I1 120 aa7.26□□□□□ -1.25
CDH3-206ENST00000567674 VCYO14598 125 aa7.26□□□□□ -1.25
CDH3-206ENST00000567674 HLA-DQA1P01909 254 aa7.26□□□□□ -1.25
CDH3-206ENST00000567674 SMR3BP02814 79 aaPredicted RBP7.26□□□□□ -1.25
CDH3-206ENST00000567674 S100A8P05109 93 aa7.26□□□□□ -1.25
CDH3-206ENST00000567674 PRSS1P07477 247 aa7.26□□□□□ -1.25
CDH3-206ENST00000567674 ESDP10768 282 aa7.26□□□□□ -1.25
CDH3-206ENST00000567674 RAB4AP20338 218 aa7.26□□□□□ -1.25
CDH3-206ENST00000567674 CEBPGP53567 150 aa7.26□□□□□ -1.25
CDH3-206ENST00000567674 AMMECR1LQ6DCA0 310 aa7.26□□□□□ -1.25
CDH3-206ENST00000567674 TMEM101Q96IK0 257 aa7.26□□□□□ -1.25
CDH3-206ENST00000567674 BTF3L4Q96K17 158 aa7.26□□□□□ -1.25
CDH3-206ENST00000567674 AP5S1Q9NUS5 200 aa7.26□□□□□ -1.25
CDH3-206ENST00000567674 SMIM27A0A1W2PRY6 76 aa7.25□□□□□ -1.25
CDH3-206ENST00000567674 RPL32P62910 135 aaKnown RBP7.25□□□□□ -1.25
CDH3-206ENST00000567674 CIRBPQ14011 172 aaKnown RBP7.25□□□□□ -1.25
CDH3-206ENST00000567674 OR5A1Q8NGJ0 315 aa7.25□□□□□ -1.25
CDH3-206ENST00000567674 TRBV24-1A0A075B6N3 115 aa7.24□□□□□ -1.25
CDH3-206ENST00000567674 TRAV26-2A0A0B4J265 109 aa7.24□□□□□ -1.25
CDH3-206ENST00000567674 FGF6P10767 208 aa7.24□□□□□ -1.25
CDH3-206ENST00000567674 RPL23P62829 140 aaKnown RBP7.24□□□□□ -1.25
CDH3-206ENST00000567674 SDIM1Q6ZPB5 146 aa7.24□□□□□ -1.25
CDH3-206ENST00000567674 SCXQ7RTU7 201 aa7.24□□□□□ -1.25
CDH3-206ENST00000567674 LINC00528Q8N1L1 170 aa7.24□□□□□ -1.25
CDH3-206ENST00000567674 NUP35Q8NFH5 326 aa7.24□□□□□ -1.25
CDH3-206ENST00000567674 CIRBP-AS1Q8TBR5 109 aa7.24□□□□□ -1.25
CDH3-206ENST00000567674 C20orf78Q9BR46 151 aa7.24□□□□□ -1.25
CDH3-206ENST00000567674 F8W036 122 aa7.23□□□□□ -1.25
CDH3-206ENST00000567674 PHOX2AO14813 284 aa7.23□□□□□ -1.25
CDH3-206ENST00000567674 PPBPP02775 128 aa7.23□□□□□ -1.25
CDH3-206ENST00000567674 TMEM18Q96B42 140 aa7.23□□□□□ -1.25
CDH3-206ENST00000567674 RPL39LQ96EH5 51 aaKnown RBP7.23□□□□□ -1.25
CDH3-206ENST00000567674 KIR2DL4Q99706 377 aa7.23□□□□□ -1.25
CDH3-206ENST00000567674 IGHV3-64A0A075B6Q5 118 aa7.22□□□□□ -1.25
CDH3-206ENST00000567674 A0A1B0GVG6 124 aa7.22□□□□□ -1.25
CDH3-206ENST00000567674 FAM104BQ5XKR9 115 aa7.22□□□□□ -1.25
CDH3-206ENST00000567674 TIMM21Q9BVV7 248 aa7.22□□□□□ -1.25
CDH3-206ENST00000567674 hDV102S1A0JD36 115 aa7.21□□□□□ -1.26
CDH3-206ENST00000567674 C7orf77A4D0Y5 90 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms