RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 DEFB114Q30KQ6 69 aa12.96□□□□□ -0.34
CMTM3-214ENST00000567572 DYNLRB2Q8TF09 96 aa12.96□□□□□ -0.34
CMTM3-214ENST00000567572 PLEKHB2Q96CS7 222 aa12.96□□□□□ -0.34
CMTM3-214ENST00000567572 KNCNA6PVL3 124 aa12.95□□□□□ -0.34
CMTM3-214ENST00000567572 RHODO00212 210 aa12.95□□□□□ -0.34
CMTM3-214ENST00000567572 LYRM7Q5U5X0 104 aa12.95□□□□□ -0.34
CMTM3-214ENST00000567572 J3QQQ9 107 aa12.94□□□□□ -0.34
CMTM3-214ENST00000567572 LEPROTO15243 131 aa12.94□□□□□ -0.34
CMTM3-214ENST00000567572 SLC25A29Q8N8R3 303 aa12.94□□□□□ -0.34
CMTM3-214ENST00000567572 TMEM223A0PJW6 202 aa12.94□□□□□ -0.34
CMTM3-214ENST00000567572 LGALS3P17931 250 aaKnown RBP12.94□□□□□ -0.34
CMTM3-214ENST00000567572 PROK1P58294 105 aa12.94□□□□□ -0.34
CMTM3-214ENST00000567572 SPXQ9BT56 116 aa12.94□□□□□ -0.34
CMTM3-214ENST00000567572 MAP6D1Q9H9H5 199 aa12.93□□□□□ -0.34
CMTM3-214ENST00000567572 IGLV4-3A0A075B6K6 122 aa12.92□□□□□ -0.34
CMTM3-214ENST00000567572 TRAV25A0A0B4J276 109 aa12.92□□□□□ -0.34
CMTM3-214ENST00000567572 EMP1P54849 157 aa12.92□□□□□ -0.34
CMTM3-214ENST00000567572 AMELXQ99217 191 aa12.92□□□□□ -0.34
CMTM3-214ENST00000567572 VCX2Q9H322 139 aa12.92□□□□□ -0.34
CMTM3-214ENST00000567572 RBMY1BA6NDE4 496 aaKnown RBP12.92□□□□□ -0.34
CMTM3-214ENST00000567572 RBMY1EA6NEQ0 496 aaKnown RBP12.92□□□□□ -0.34
CMTM3-214ENST00000567572 INAFM1C9JVW0 142 aa12.92□□□□□ -0.34
CMTM3-214ENST00000567572 RBMY1DP0C7P1 496 aaKnown RBP12.92□□□□□ -0.34
CMTM3-214ENST00000567572 DNAJC30Q96LL9 226 aa12.92□□□□□ -0.34
CMTM3-214ENST00000567572 MRPL16Q9NX20 251 aaKnown RBP12.92□□□□□ -0.34
CMTM3-214ENST00000567572 PGPEP1Q9NXJ5 209 aa12.92□□□□□ -0.34
CMTM3-214ENST00000567572 TSPEAR-AS2P59090 65 aa12.91□□□□□ -0.34
CMTM3-214ENST00000567572 TNFRSF18Q9Y5U5 241 aa12.91□□□□□ -0.34
CMTM3-214ENST00000567572 ADARB2-AS1A8MUL3 147 aa12.9□□□□□ -0.34
CMTM3-214ENST00000567572 J3QR89 54 aa12.9□□□□□ -0.34
CMTM3-214ENST00000567572 INSP01308 110 aa12.9□□□□□ -0.34
CMTM3-214ENST00000567572 IGHV3-30P01768 117 aa12.9□□□□□ -0.34
CMTM3-214ENST00000567572 IGHV3-30-5P0DP03 117 aa12.9□□□□□ -0.34
CMTM3-214ENST00000567572 ZNF22P17026 224 aaPredicted RBP12.9□□□□□ -0.35
CMTM3-214ENST00000567572 SPANXA1Q9NS26 97 aa12.9□□□□□ -0.35
CMTM3-214ENST00000567572 BEAN1Q3B7T3 259 aa12.89□□□□□ -0.35
CMTM3-214ENST00000567572 GAGE13Q4V321 117 aa12.89□□□□□ -0.35
CMTM3-214ENST00000567572 AGRNO00468 2067 aa12.89□□□□□ -0.35
CMTM3-214ENST00000567572 NSD1Q96L73 2696 aaPredicted RBP12.89□□□□□ -0.35
CMTM3-214ENST00000567572 SETXQ7Z333 2677 aaKnown RBP12.88□□□□□ -0.35
CMTM3-214ENST00000567572 H3BMG7 143 aa12.88□□□□□ -0.35
CMTM3-214ENST00000567572 MRPS36P82909 103 aaKnown RBP12.88□□□□□ -0.35
CMTM3-214ENST00000567572 RPL24P83731 157 aaKnown RBP12.88□□□□□ -0.35
CMTM3-214ENST00000567572 NDUFA11Q86Y39 141 aa12.88□□□□□ -0.35
CMTM3-214ENST00000567572 C11orf72Q8NBR9 251 aa12.88□□□□□ -0.35
CMTM3-214ENST00000567572 SETD2Q9BYW2 2564 aaPredicted RBP12.87□□□□□ -0.35
CMTM3-214ENST00000567572 TEX48A0A1B0GUV7 120 aa12.87□□□□□ -0.35
CMTM3-214ENST00000567572 IGHV3-53P01767 116 aa12.87□□□□□ -0.35
CMTM3-214ENST00000567572 UBE2D3P61077 147 aa12.87□□□□□ -0.35
CMTM3-214ENST00000567572 UBE2D2P62837 147 aa12.87□□□□□ -0.35
CMTM3-214ENST00000567572 CFAP126Q5VTH2 177 aa12.87□□□□□ -0.35
CMTM3-214ENST00000567572 DEFB104AQ8WTQ1 72 aa12.87□□□□□ -0.35
CMTM3-214ENST00000567572 PRO0461Q9UI25 63 aa12.87□□□□□ -0.35
CMTM3-214ENST00000567572 TSPAN13O95857 204 aa12.86□□□□□ -0.35
CMTM3-214ENST00000567572 OPRPNQ99935 248 aaPredicted RBP12.86□□□□□ -0.35
CMTM3-214ENST00000567572 SORL1Q92673 2214 aa12.86□□□□□ -0.35
CMTM3-214ENST00000567572 HIVEP1P15822 2718 aa12.85□□□□□ -0.35
CMTM3-214ENST00000567572 TRBV20-1A0A075B6N2 111 aa12.85□□□□□ -0.35
CMTM3-214ENST00000567572 TMEM238C9JI98 176 aa12.85□□□□□ -0.35
CMTM3-214ENST00000567572 RS1O15537 224 aa12.85□□□□□ -0.35
CMTM3-214ENST00000567572 HTN1P15515 57 aa12.85□□□□□ -0.35
CMTM3-214ENST00000567572 LINC01587Q99440 93 aa12.85□□□□□ -0.35
CMTM3-214ENST00000567572 A0A0J9YXV3 536 aa12.84□□□□□ -0.35
CMTM3-214ENST00000567572 KRTAP10-3P60369 221 aa12.84□□□□□ -0.35
CMTM3-214ENST00000567572 ODF3L2Q3SX64 289 aa12.84□□□□□ -0.35
CMTM3-214ENST00000567572 C10orf126Q8N4M7 172 aa12.84□□□□□ -0.35
CMTM3-214ENST00000567572 WFDC2Q14508 124 aa12.84□□□□□ -0.35
CMTM3-214ENST00000567572 ATP6V0E2Q8NHE4 81 aa12.84□□□□□ -0.35
CMTM3-214ENST00000567572 TINCRA0A1B0GVN0 87 aa12.82□□□□□ -0.36
CMTM3-214ENST00000567572 CFC1BP0CG36 223 aa12.82□□□□□ -0.36
CMTM3-214ENST00000567572 CFC1P0CG37 223 aa12.82□□□□□ -0.36
CMTM3-214ENST00000567572 FAM104AQ969W3 186 aa12.82□□□□□ -0.36
CMTM3-214ENST00000567572 CHCHD7Q9BUK0 85 aa12.82□□□□□ -0.36
CMTM3-214ENST00000567572 PRO1854Q9UHT4 67 aa12.82□□□□□ -0.36
CMTM3-214ENST00000567572 IGHV3-73A0A0B4J1V6 119 aa12.82□□□□□ -0.36
CMTM3-214ENST00000567572 A0A0B4J2C4 111 aa12.82□□□□□ -0.36
CMTM3-214ENST00000567572 APOMO95445 188 aa12.82□□□□□ -0.36
CMTM3-214ENST00000567572 TIMM21Q9BVV7 248 aa12.82□□□□□ -0.36
CMTM3-214ENST00000567572 UBE2D4Q9Y2X8 147 aa12.82□□□□□ -0.36
CMTM3-214ENST00000567572 FN1P02751 2386 aaKnown RBP12.81□□□□□ -0.36
CMTM3-214ENST00000567572 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.81□□□□□ -0.36
CMTM3-214ENST00000567572 CRLF1O75462 422 aa12.81□□□□□ -0.36
CMTM3-214ENST00000567572 IL17DQ8TAD2 202 aa12.81□□□□□ -0.36
CMTM3-214ENST00000567572 CMC4P56277 68 aaPredicted RBP12.8□□□□□ -0.36
CMTM3-214ENST00000567572 WNK1Q9H4A3 2382 aa12.8□□□□□ -0.36
CMTM3-214ENST00000567572 IGHV1-58A0A0C4DH39 117 aa12.8□□□□□ -0.36
CMTM3-214ENST00000567572 IGLV1-51P01701 117 aa12.8□□□□□ -0.36
CMTM3-214ENST00000567572 IGHV3-30-3P0DP02 117 aa12.8□□□□□ -0.36
CMTM3-214ENST00000567572 NIPBLQ6KC79 2804 aaeCLIP12.79□□□□□ -0.36
CMTM3-214ENST00000567572 LOC107984156A0A0G2JMH3 177 aa12.79□□□□□ -0.36
CMTM3-214ENST00000567572 ARL17AQ8IVW1 177 aa12.79□□□□□ -0.36
CMTM3-214ENST00000567572 STHQ8IWL8 128 aa12.79□□□□□ -0.36
CMTM3-214ENST00000567572 ETDBQ3ZM63 59 aa12.78□□□□□ -0.36
CMTM3-214ENST00000567572 Q6ZSN1 163 aa12.78□□□□□ -0.36
CMTM3-214ENST00000567572 A0A0J9YXY3 114 aa12.78□□□□□ -0.36
CMTM3-214ENST00000567572 TRBV10-1A0A0K0K1A3 114 aa12.76□□□□□ -0.37
CMTM3-214ENST00000567572 A4D1N5 150 aa12.76□□□□□ -0.37
CMTM3-214ENST00000567572 C1QTNF4Q9BXJ3 329 aa12.76□□□□□ -0.37
CMTM3-214ENST00000567572 VSIG2Q96IQ7 327 aa12.76□□□□□ -0.37
CMTM3-214ENST00000567572 SPANXDQ9BXN6 97 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms