RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 PTPN23Q9H3S7 1636 aa-0.38□□□□□ -2.47
CDH1-211ENST00000567320 DISP2A7MBM2 1401 aa-0.38□□□□□ -2.47
CDH1-211ENST00000567320 MYOM3Q5VTT5 1437 aa-0.38□□□□□ -2.47
CDH1-211ENST00000567320 PRG4Q92954 1404 aaPredicted RBP-0.38□□□□□ -2.47
CDH1-211ENST00000567320 SETXQ7Z333 2677 aaKnown RBP-0.39□□□□□ -2.47
CDH1-211ENST00000567320 LAMA3Q16787 3333 aa-0.39□□□□□ -2.47
CDH1-211ENST00000567320 PAPPA2Q9BXP8 1791 aa-0.39□□□□□ -2.47
CDH1-211ENST00000567320 MYOM1P52179 1685 aa-0.39□□□□□ -2.47
CDH1-211ENST00000567320 ROBO1Q9Y6N7 1651 aa-0.39□□□□□ -2.47
CDH1-211ENST00000567320 EPPK1P58107 5090 aaKnown RBP-0.39□□□□□ -2.47
CDH1-211ENST00000567320 ROCK1Q13464 1354 aa-0.39□□□□□ -2.47
CDH1-211ENST00000567320 MYO7AQ13402 2215 aa-0.39□□□□□ -2.47
CDH1-211ENST00000567320 BSNQ9UPA5 3926 aa-0.39□□□□□ -2.47
CDH1-211ENST00000567320 TRBV20-1A0A075B6N2 111 aa-0.39□□□□□ -2.47
CDH1-211ENST00000567320 TRAV36DV7A0A075B6V5 113 aa-0.39□□□□□ -2.47
CDH1-211ENST00000567320 CTXND1A0A1B0GTU2 59 aa-0.39□□□□□ -2.47
CDH1-211ENST00000567320 CCDC179H3BU77 68 aa-0.39□□□□□ -2.47
CDH1-211ENST00000567320 PGRMC1O00264 195 aaKnown RBP-0.39□□□□□ -2.47
CDH1-211ENST00000567320 NPFFO15130 113 aa-0.39□□□□□ -2.47
CDH1-211ENST00000567320 DPM2O94777 84 aa-0.39□□□□□ -2.47
CDH1-211ENST00000567320 TNFSF15O95150 251 aa-0.39□□□□□ -2.47
CDH1-211ENST00000567320 FAM107AO95990 144 aa-0.39□□□□□ -2.47
CDH1-211ENST00000567320 PPP1R17O96001 155 aa-0.39□□□□□ -2.47
CDH1-211ENST00000567320 RBP4P02753 201 aa-0.39□□□□□ -2.47
CDH1-211ENST00000567320 S100A6P06703 90 aa-0.39□□□□□ -2.47
CDH1-211ENST00000567320 RRAS2P62070 204 aaPredicted RBP-0.39□□□□□ -2.47
CDH1-211ENST00000567320 LSM3P62310 102 aaKnown RBP-0.39□□□□□ -2.47
CDH1-211ENST00000567320 PSPHP78330 225 aa-0.39□□□□□ -2.47
CDH1-211ENST00000567320 TFAMQ00059 246 aaKnown RBP-0.39□□□□□ -2.47
CDH1-211ENST00000567320 PIGYQ3MUY2 71 aa-0.39□□□□□ -2.47
CDH1-211ENST00000567320 LELP1Q5T871 98 aa-0.39□□□□□ -2.47
CDH1-211ENST00000567320 SPANXN1Q5VSR9 72 aa-0.39□□□□□ -2.47
CDH1-211ENST00000567320 SAMD13Q5VXD3 122 aa-0.39□□□□□ -2.47
CDH1-211ENST00000567320 TRIQKQ629K1 86 aa-0.39□□□□□ -2.47
CDH1-211ENST00000567320 Q6AWC8 147 aa-0.39□□□□□ -2.47
CDH1-211ENST00000567320 Q6ZUT4 128 aa-0.39□□□□□ -2.47
CDH1-211ENST00000567320 OR8I2Q8N0Y5 310 aa-0.39□□□□□ -2.47
CDH1-211ENST00000567320 VSTM2AQ8TAG5 236 aa-0.39□□□□□ -2.47
CDH1-211ENST00000567320 LCN9Q8WX39 176 aa-0.39□□□□□ -2.47
CDH1-211ENST00000567320 TSLPQ969D9 159 aa-0.39□□□□□ -2.47
CDH1-211ENST00000567320 CHMP6Q96FZ7 201 aa-0.39□□□□□ -2.47
CDH1-211ENST00000567320 VPS25Q9BRG1 176 aa-0.39□□□□□ -2.47
CDH1-211ENST00000567320 PCBD2Q9H0N5 130 aa-0.39□□□□□ -2.47
CDH1-211ENST00000567320 BOLA2Q9H3K6 86 aa-0.39□□□□□ -2.47
CDH1-211ENST00000567320 CALML5Q9NZT1 146 aa-0.39□□□□□ -2.47
CDH1-211ENST00000567320 SCP2D1Q9UJQ7 156 aa-0.39□□□□□ -2.47
CDH1-211ENST00000567320 STOML2Q9UJZ1 356 aa-0.39□□□□□ -2.47
CDH1-211ENST00000567320 HIGD1AQ9Y241 93 aa-0.39□□□□□ -2.47
CDH1-211ENST00000567320 RYR1P21817 5038 aa-0.39□□□□□ -2.47
CDH1-211ENST00000567320 PHLPP1O60346 1717 aa-0.39□□□□□ -2.47
CDH1-211ENST00000567320 DOCK11Q5JSL3 2073 aa-0.39□□□□□ -2.47
CDH1-211ENST00000567320 DAPK1P53355 1430 aa-0.39□□□□□ -2.47
CDH1-211ENST00000567320 TET3O43151 1660 aa-0.4□□□□□ -2.47
CDH1-211ENST00000567320 CNOT1A5YKK6 2376 aaKnown RBP-0.4□□□□□ -2.47
CDH1-211ENST00000567320 MYH8P13535 1937 aa-0.4□□□□□ -2.47
CDH1-211ENST00000567320 NKTRP30414 1462 aaKnown RBP-0.4□□□□□ -2.47
CDH1-211ENST00000567320 MAGI1Q96QZ7 1491 aaPredicted RBP-0.4□□□□□ -2.47
CDH1-211ENST00000567320 IFT140Q96RY7 1462 aa-0.4□□□□□ -2.47
CDH1-211ENST00000567320 NLRP1Q9C000 1473 aa-0.4□□□□□ -2.47
CDH1-211ENST00000567320 TMEM2Q9UHN6 1383 aa-0.4□□□□□ -2.47
CDH1-211ENST00000567320 NUP188Q5SRE5 1749 aa-0.4□□□□□ -2.47
CDH1-211ENST00000567320 GVINP1Q7Z2Y8 2422 aa-0.4□□□□□ -2.47
CDH1-211ENST00000567320 BORCS7-ASMTA0A0B4J1R7 106 aa-0.4□□□□□ -2.47
CDH1-211ENST00000567320 SPAARA0A1B0GVQ0 90 aa-0.4□□□□□ -2.47
CDH1-211ENST00000567320 A0A1B0GX51 115 aa-0.4□□□□□ -2.47
CDH1-211ENST00000567320 HCG22E2RYF7 251 aa-0.4□□□□□ -2.47
CDH1-211ENST00000567320 TNFP01375 233 aa-0.4□□□□□ -2.47
CDH1-211ENST00000567320 SCTP09683 121 aa-0.4□□□□□ -2.47
CDH1-211ENST00000567320 IGLC6P0CF74 106 aa-0.4□□□□□ -2.47
CDH1-211ENST00000567320 LINC00694P0DN24 101 aa-0.4□□□□□ -2.47
CDH1-211ENST00000567320 H1FX-AS1Q4G0G2 97 aa-0.4□□□□□ -2.47
CDH1-211ENST00000567320 TMEM128Q5BJH2 165 aa-0.4□□□□□ -2.47
CDH1-211ENST00000567320 TOMM20LQ6UXN7 152 aa-0.4□□□□□ -2.47
CDH1-211ENST00000567320 ZNF818PQ6ZRF7 136 aa-0.4□□□□□ -2.47
CDH1-211ENST00000567320 TCTE3Q8IZS6 198 aa-0.4□□□□□ -2.47
CDH1-211ENST00000567320 OR9Q1Q8NGQ5 310 aa-0.4□□□□□ -2.47
CDH1-211ENST00000567320 NAA60Q9H7X0 242 aa-0.4□□□□□ -2.47
CDH1-211ENST00000567320 NDUFA4L2Q9NRX3 87 aa-0.4□□□□□ -2.47
CDH1-211ENST00000567320 RPRMQ9NS64 109 aa-0.4□□□□□ -2.47
CDH1-211ENST00000567320 APLNQ9ULZ1 77 aa-0.4□□□□□ -2.47
CDH1-211ENST00000567320 V9GYH0 126 aa-0.4□□□□□ -2.47
CDH1-211ENST00000567320 NBEAL1Q6ZS30 2694 aa-0.4□□□□□ -2.47
CDH1-211ENST00000567320 SLIT1O75093 1534 aa-0.4□□□□□ -2.47
CDH1-211ENST00000567320 TROQ12816 1431 aaPredicted RBP-0.4□□□□□ -2.47
CDH1-211ENST00000567320 QRICH2Q9H0J4 1663 aa-0.4□□□□□ -2.47
CDH1-211ENST00000567320 MYH13Q9UKX3 1938 aa-0.4□□□□□ -2.47
CDH1-211ENST00000567320 TGP01266 2768 aa-0.4□□□□□ -2.47
CDH1-211ENST00000567320 SONP18583 2426 aaKnown RBP-0.4□□□□□ -2.47
CDH1-211ENST00000567320 DOCK2Q92608 1830 aa-0.41□□□□□ -2.47
CDH1-211ENST00000567320 SPTBN4Q9H254 2564 aa-0.41□□□□□ -2.47
CDH1-211ENST00000567320 C1orf167Q5SNV9 1468 aa-0.41□□□□□ -2.47
CDH1-211ENST00000567320 XRN1Q8IZH2 1706 aaKnown RBP-0.41□□□□□ -2.47
CDH1-211ENST00000567320 SPTBN1Q01082 2364 aaKnown RBP-0.41□□□□□ -2.47
CDH1-211ENST00000567320 RYR3Q15413 4870 aa-0.41□□□□□ -2.47
CDH1-211ENST00000567320 HYDINQ4G0P3 5121 aa-0.41□□□□□ -2.47
CDH1-211ENST00000567320 RAPGEF6Q8TEU7 1601 aa-0.41□□□□□ -2.47
CDH1-211ENST00000567320 A0A1B0GV72 72 aa-0.41□□□□□ -2.48
CDH1-211ENST00000567320 H0YJX3 145 aa-0.41□□□□□ -2.48
CDH1-211ENST00000567320 SMIM24O75264 130 aa-0.41□□□□□ -2.48
CDH1-211ENST00000567320 E2F6O75461 281 aa-0.41□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms