RNA–Protein interactions for RNA: ENST00000566498.1

CCDC113-204, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-204ENST00000566498 AMTP48728 403 aa12.75□□□□□ -0.37
CCDC113-204ENST00000566498 MIAQ16674 131 aa12.75□□□□□ -0.37
CCDC113-204ENST00000566498 DNAH5Q8TE73 4624 aa12.75□□□□□ -0.37
CCDC113-204ENST00000566498 KRTAP17-1Q9BYP8 105 aa12.75□□□□□ -0.37
CCDC113-204ENST00000566498 XGP55808 180 aa12.74□□□□□ -0.37
CCDC113-204ENST00000566498 RIGQ13278 110 aa12.74□□□□□ -0.37
CCDC113-204ENST00000566498 Q8N1X5 172 aa12.74□□□□□ -0.37
CCDC113-204ENST00000566498 NUP35Q8NFH5 326 aa12.74□□□□□ -0.37
CCDC113-204ENST00000566498 HSPG2P98160 4391 aa12.74□□□□□ -0.37
CCDC113-204ENST00000566498 RAB14P61106 215 aa12.73□□□□□ -0.37
CCDC113-204ENST00000566498 TMEM191AQ9H0A3 160 aa12.73□□□□□ -0.37
CCDC113-204ENST00000566498 NAT8BQ9UHF3 227 aa12.73□□□□□ -0.37
CCDC113-204ENST00000566498 PMCHP20382 165 aa12.72□□□□□ -0.37
CCDC113-204ENST00000566498 PRR34Q9NV39 138 aa12.72□□□□□ -0.37
CCDC113-204ENST00000566498 RYR1P21817 5038 aa12.72□□□□□ -0.37
CCDC113-204ENST00000566498 A0A1B0GUV1 79 aa12.71□□□□□ -0.37
CCDC113-204ENST00000566498 SDHAF1A6NFY7 115 aa12.71□□□□□ -0.37
CCDC113-204ENST00000566498 HLA-DQA1P01909 254 aa12.71□□□□□ -0.37
CCDC113-204ENST00000566498 REG3AQ06141 175 aa12.71□□□□□ -0.37
CCDC113-204ENST00000566498 IGLV4-60A0A075B6I1 120 aa12.7□□□□□ -0.38
CCDC113-204ENST00000566498 RAB4AP20338 218 aa12.7□□□□□ -0.38
CCDC113-204ENST00000566498 AMN1Q8IY45 258 aa12.7□□□□□ -0.38
CCDC113-204ENST00000566498 C20orf203Q8NBC4 194 aa12.7□□□□□ -0.38
CCDC113-204ENST00000566498 ST20Q9HBF5 79 aa12.7□□□□□ -0.38
CCDC113-204ENST00000566498 APOBP04114 4563 aaKnown RBP12.69□□□□□ -0.38
CCDC113-204ENST00000566498 IGLV10-54A0A075B6I4 117 aa12.69□□□□□ -0.38
CCDC113-204ENST00000566498 I3L3M4 83 aa12.69□□□□□ -0.38
CCDC113-204ENST00000566498 GAS8-AS1O95177 125 aa12.69□□□□□ -0.38
CCDC113-204ENST00000566498 NCR2O95944 276 aa12.69□□□□□ -0.38
CCDC113-204ENST00000566498 C14orf177Q52M58 125 aa12.69□□□□□ -0.38
CCDC113-204ENST00000566498 AMMECR1LQ6DCA0 310 aa12.68□□□□□ -0.38
CCDC113-204ENST00000566498 MRAP2Q96G30 205 aa12.68□□□□□ -0.38
CCDC113-204ENST00000566498 RNF185Q96GF1 192 aa12.68□□□□□ -0.38
CCDC113-204ENST00000566498 TMEM70Q9BUB7 260 aa12.68□□□□□ -0.38
CCDC113-204ENST00000566498 TRBV6-5A0A0K0K1A5 114 aa12.67□□□□□ -0.38
CCDC113-204ENST00000566498 SMIM27A0A1W2PRY6 76 aa12.67□□□□□ -0.38
CCDC113-204ENST00000566498 APCSP02743 223 aa12.67□□□□□ -0.38
CCDC113-204ENST00000566498 HAMPP81172 84 aa12.67□□□□□ -0.38
CCDC113-204ENST00000566498 LINC01620Q4KN68 170 aa12.67□□□□□ -0.38
CCDC113-204ENST00000566498 TRAV8-4A0A0B4J246 113 aa12.66□□□□□ -0.38
CCDC113-204ENST00000566498 EPM2AB3EWF7 344 aa12.66□□□□□ -0.38
CCDC113-204ENST00000566498 USP17L23D6RBM5 183 aa12.66□□□□□ -0.38
CCDC113-204ENST00000566498 SMR3BP02814 79 aaPredicted RBP12.66□□□□□ -0.38
CCDC113-204ENST00000566498 CAMPP49913 170 aa12.66□□□□□ -0.38
CCDC113-204ENST00000566498 RNASEKQ6P5S7 137 aaKnown RBP12.66□□□□□ -0.38
CCDC113-204ENST00000566498 FAM30AQ9NZY2 134 aa12.66□□□□□ -0.38
CCDC113-204ENST00000566498 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.65□□□□□ -0.38
CCDC113-204ENST00000566498 IGKV2-29A2NJV5 120 aaPredicted RBP12.65□□□□□ -0.38
CCDC113-204ENST00000566498 RPS10P46783 165 aaKnown RBP12.65□□□□□ -0.38
CCDC113-204ENST00000566498 IGKV3OR2-268A0A0C4DH90 116 aa12.64□□□□□ -0.39
CCDC113-204ENST00000566498 SMKR1H3BMG3 65 aa12.64□□□□□ -0.39
CCDC113-204ENST00000566498 H7C423 109 aa12.63□□□□□ -0.39
CCDC113-204ENST00000566498 PPP1R17O96001 155 aa12.63□□□□□ -0.39
CCDC113-204ENST00000566498 KRTAP26-1Q6PEX3 210 aa12.63□□□□□ -0.39
CCDC113-204ENST00000566498 A0A1B0GW15 77 aa12.62□□□□□ -0.39
CCDC113-204ENST00000566498 FGF6P10767 208 aa12.62□□□□□ -0.39
CCDC113-204ENST00000566498 POLR2KP53803 58 aaKnown RBP12.62□□□□□ -0.39
CCDC113-204ENST00000566498 FAM104BQ5XKR9 115 aa12.62□□□□□ -0.39
CCDC113-204ENST00000566498 BTF3L4Q96K17 158 aa12.62□□□□□ -0.39
CCDC113-204ENST00000566498 TMEM242Q9NWH2 141 aa12.62□□□□□ -0.39
CCDC113-204ENST00000566498 VCYO14598 125 aa12.61□□□□□ -0.39
CCDC113-204ENST00000566498 TSHBP01222 138 aa12.61□□□□□ -0.39
CCDC113-204ENST00000566498 PRSS1P07477 247 aa12.61□□□□□ -0.39
CCDC113-204ENST00000566498 MRPL51Q4U2R6 128 aaKnown RBP12.61□□□□□ -0.39
CCDC113-204ENST00000566498 MRPL54Q6P161 138 aaKnown RBP12.61□□□□□ -0.39
CCDC113-204ENST00000566498 TMEM101Q96IK0 257 aa12.61□□□□□ -0.39
CCDC113-204ENST00000566498 PCLOQ9Y6V0 5065 aa12.59□□□□□ -0.39
CCDC113-204ENST00000566498 TRBV27A0A0K0K1C4 114 aa12.59□□□□□ -0.39
CCDC113-204ENST00000566498 F8W036 122 aa12.59□□□□□ -0.39
CCDC113-204ENST00000566498 FAM229AH3BQW9 127 aa12.59□□□□□ -0.39
CCDC113-204ENST00000566498 PPP1R2P9O14990 202 aa12.59□□□□□ -0.39
CCDC113-204ENST00000566498 S100A8P05109 93 aa12.59□□□□□ -0.39
CCDC113-204ENST00000566498 FCER1GP30273 86 aa12.59□□□□□ -0.39
CCDC113-204ENST00000566498 CKS2P33552 79 aa12.59□□□□□ -0.39
CCDC113-204ENST00000566498 CLRN3Q8NCR9 226 aa12.59□□□□□ -0.39
CCDC113-204ENST00000566498 ESDP10768 282 aa12.58□□□□□ -0.4
CCDC113-204ENST00000566498 ZNF25P17030 456 aaPredicted RBP12.58□□□□□ -0.4
CCDC113-204ENST00000566498 SUMO2P61956 95 aaKnown RBP12.58□□□□□ -0.4
CCDC113-204ENST00000566498 HBBP68871 147 aa12.58□□□□□ -0.4
CCDC113-204ENST00000566498 CLLU1Q5K131 121 aa12.58□□□□□ -0.4
CCDC113-204ENST00000566498 Q5VSD8 79 aa12.58□□□□□ -0.4
CCDC113-204ENST00000566498 DGAT2L7PQ6IED9 249 aa12.58□□□□□ -0.4
CCDC113-204ENST00000566498 NRACQ8N912 160 aa12.58□□□□□ -0.4
CCDC113-204ENST00000566498 LINC00862A6NCI5 91 aa12.57□□□□□ -0.4
CCDC113-204ENST00000566498 GAGE12HA6NDE8 117 aa12.57□□□□□ -0.4
CCDC113-204ENST00000566498 PNRC1Q12796 327 aaPredicted RBP12.57□□□□□ -0.4
CCDC113-204ENST00000566498 OR5A1Q8NGJ0 315 aa12.57□□□□□ -0.4
CCDC113-204ENST00000566498 hDV102S1A0JD36 115 aa12.56□□□□□ -0.4
CCDC113-204ENST00000566498 MT-ND4LP03901 98 aa12.56□□□□□ -0.4
CCDC113-204ENST00000566498 Q6ZSA8 131 aa12.56□□□□□ -0.4
CCDC113-204ENST00000566498 KIR2DL4Q99706 377 aa12.56□□□□□ -0.4
CCDC113-204ENST00000566498 C7orf77A4D0Y5 90 aa12.55□□□□□ -0.4
CCDC113-204ENST00000566498 CFAP161Q6P656 301 aa12.54□□□□□ -0.4
CCDC113-204ENST00000566498 CHCHD10Q8WYQ3 142 aaPredicted RBP12.54□□□□□ -0.4
CCDC113-204ENST00000566498 ANAPC16Q96DE5 110 aa12.54□□□□□ -0.4
CCDC113-204ENST00000566498 AP5S1Q9NUS5 200 aa12.54□□□□□ -0.4
CCDC113-204ENST00000566498 A0A1B0GXF2 115 aa12.53□□□□□ -0.4
CCDC113-204ENST00000566498 TNFRSF6BO95407 300 aa12.53□□□□□ -0.4
CCDC113-204ENST00000566498 C20orf78Q9BR46 151 aa12.53□□□□□ -0.4
CCDC113-204ENST00000566498 TRBV24-1A0A075B6N3 115 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms