RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 TMEM178BH3BS89 294 aa2.22□□□□□ -2.05
CHD9-218ENST00000566029 LINC01561Q8N1V8 128 aa2.22□□□□□ -2.05
CHD9-218ENST00000566029 FAM216BQ8N7L0 139 aa2.22□□□□□ -2.05
CHD9-218ENST00000566029 UPK3BQ9BT76 320 aa2.22□□□□□ -2.05
CHD9-218ENST00000566029 MSRB1Q9NZV6 116 aa2.22□□□□□ -2.05
CHD9-218ENST00000566029 CTSZQ9UBR2 303 aa2.22□□□□□ -2.05
CHD9-218ENST00000566029 IGLV7-46A0A075B6I9 117 aa2.22□□□□□ -2.05
CHD9-218ENST00000566029 SRRM5B3KS81 715 aa2.22□□□□□ -2.05
CHD9-218ENST00000566029 C5orf38Q86SI9 138 aa2.22□□□□□ -2.05
CHD9-218ENST00000566029 EXOC3-AS1Q8N2X6 119 aa2.22□□□□□ -2.05
CHD9-218ENST00000566029 RIF1Q5UIP0 2472 aaKnown RBP2.22□□□□□ -2.05
CHD9-218ENST00000566029 TRBV10-1A0A0K0K1A3 114 aa2.22□□□□□ -2.05
CHD9-218ENST00000566029 OXTP01178 125 aa2.22□□□□□ -2.05
CHD9-218ENST00000566029 WT1P19544 449 aaPredicted RBP2.22□□□□□ -2.05
CHD9-218ENST00000566029 CRIP2P52943 208 aaPredicted RBP2.22□□□□□ -2.05
CHD9-218ENST00000566029 DEFB114Q30KQ6 69 aa2.22□□□□□ -2.05
CHD9-218ENST00000566029 LINC00311Q8N616 119 aa2.22□□□□□ -2.05
CHD9-218ENST00000566029 CRIP1P50238 77 aa2.22□□□□□ -2.05
CHD9-218ENST00000566029 C11orf21Q9P2W6 132 aa2.22□□□□□ -2.05
CHD9-218ENST00000566029 RETNLBQ9BQ08 111 aa2.22□□□□□ -2.05
CHD9-218ENST00000566029 PTPN13Q12923 2485 aa2.22□□□□□ -2.05
CHD9-218ENST00000566029 IGHV3OR16-12A0A075B7B8 117 aa2.22□□□□□ -2.05
CHD9-218ENST00000566029 IGHV4-28A0A0C4DH34 117 aa2.22□□□□□ -2.05
CHD9-218ENST00000566029 LINC00158P58513 81 aa2.22□□□□□ -2.05
CHD9-218ENST00000566029 C17orf58Q2M2W7 97 aa2.22□□□□□ -2.05
CHD9-218ENST00000566029 AGPAT4-IT1Q9H0P7 198 aa2.22□□□□□ -2.05
CHD9-218ENST00000566029 RHOHQ15669 191 aa2.22□□□□□ -2.05
CHD9-218ENST00000566029 TTTY12Q9BZ98 90 aa2.22□□□□□ -2.05
CHD9-218ENST00000566029 A0A087WZ39 114 aa2.21□□□□□ -2.05
CHD9-218ENST00000566029 TEX49A0A1B0GTD5 131 aa2.21□□□□□ -2.05
CHD9-218ENST00000566029 CELA1Q9UNI1 258 aa2.21□□□□□ -2.05
CHD9-218ENST00000566029 SPG11Q96JI7 2443 aa2.21□□□□□ -2.05
CHD9-218ENST00000566029 A0A0J9YWU9 116 aa2.21□□□□□ -2.06
CHD9-218ENST00000566029 LINC00643Q86TS7 51 aa2.21□□□□□ -2.06
CHD9-218ENST00000566029 PRM2P04554 102 aa2.21□□□□□ -2.06
CHD9-218ENST00000566029 TSPEAR-AS2P59090 65 aa2.21□□□□□ -2.06
CHD9-218ENST00000566029 Q5XG85 94 aa2.21□□□□□ -2.06
CHD9-218ENST00000566029 DAND5Q8N907 189 aa2.21□□□□□ -2.06
CHD9-218ENST00000566029 DNAJC9-AS1A6NH13 148 aa2.21□□□□□ -2.06
CHD9-218ENST00000566029 NTN3O00634 580 aaPredicted RBP2.21□□□□□ -2.06
CHD9-218ENST00000566029 ZNF833PQ6ZTB9 187 aa2.21□□□□□ -2.06
CHD9-218ENST00000566029 DEFB132Q7Z7B7 95 aa2.21□□□□□ -2.06
CHD9-218ENST00000566029 CNFNQ9BYD5 112 aa2.21□□□□□ -2.06
CHD9-218ENST00000566029 ZNF80P51504 273 aaPredicted RBP2.21□□□□□ -2.06
CHD9-218ENST00000566029 TNP2Q05952 138 aa2.21□□□□□ -2.06
CHD9-218ENST00000566029 SMIM2Q9BVW6 85 aa2.21□□□□□ -2.06
CHD9-218ENST00000566029 PRO1854Q9UHT4 67 aa2.21□□□□□ -2.06
CHD9-218ENST00000566029 ACACBO00763 2458 aa2.21□□□□□ -2.06
CHD9-218ENST00000566029 IGHV4-4A0A075B6R2 117 aa2.21□□□□□ -2.06
CHD9-218ENST00000566029 TMEM223A0PJW6 202 aa2.21□□□□□ -2.06
CHD9-218ENST00000566029 IGKV3-20P01619 116 aa2.21□□□□□ -2.06
CHD9-218ENST00000566029 IGHV3-30P01768 117 aa2.21□□□□□ -2.06
CHD9-218ENST00000566029 IGHV3-30-5P0DP03 117 aa2.21□□□□□ -2.06
CHD9-218ENST00000566029 IGHV3OR16-10A0A075B7F0 116 aa2.21□□□□□ -2.06
CHD9-218ENST00000566029 IGHV1-18A0A0C4DH31 117 aa2.21□□□□□ -2.06
CHD9-218ENST00000566029 PLAC8L1A1L4L8 177 aa2.21□□□□□ -2.06
CHD9-218ENST00000566029 FAM27E3Q08E93 113 aa2.21□□□□□ -2.06
CHD9-218ENST00000566029 SHANK1Q9Y566 2161 aa2.21□□□□□ -2.06
CHD9-218ENST00000566029 CCL24O00175 119 aa2.21□□□□□ -2.06
CHD9-218ENST00000566029 IGKV1-17P01599 117 aa2.21□□□□□ -2.06
CHD9-218ENST00000566029 CEMP1Q6PRD7 247 aaPredicted RBP2.21□□□□□ -2.06
CHD9-218ENST00000566029 C16orf74Q96GX8 76 aa2.21□□□□□ -2.06
CHD9-218ENST00000566029 C17orf77Q96MU5 243 aa2.21□□□□□ -2.06
CHD9-218ENST00000566029 HIVEP2P31629 2446 aa2.21□□□□□ -2.06
CHD9-218ENST00000566029 C17orf100A8MU93 164 aa2.21□□□□□ -2.06
CHD9-218ENST00000566029 H3BRN7 92 aa2.21□□□□□ -2.06
CHD9-218ENST00000566029 LEPROTO15243 131 aa2.21□□□□□ -2.06
CHD9-218ENST00000566029 USF3Q68DE3 2245 aa2.21□□□□□ -2.06
CHD9-218ENST00000566029 MSMPQ1L6U9 139 aa2.21□□□□□ -2.06
CHD9-218ENST00000566029 IGHV1-3A0A0C4DH29 117 aa2.2□□□□□ -2.06
CHD9-218ENST00000566029 CD28P10747 220 aa2.2□□□□□ -2.06
CHD9-218ENST00000566029 PLCE1Q9P212 2302 aa2.2□□□□□ -2.06
CHD9-218ENST00000566029 S4R3C0 116 aa2.2□□□□□ -2.06
CHD9-218ENST00000566029 SORL1Q92673 2214 aa2.2□□□□□ -2.06
CHD9-218ENST00000566029 PRAC2D3DTV9 90 aa2.2□□□□□ -2.06
CHD9-218ENST00000566029 SPRY3O43610 288 aa2.2□□□□□ -2.06
CHD9-218ENST00000566029 A0A0J9YX75 114 aa2.2□□□□□ -2.06
CHD9-218ENST00000566029 SMIM1B2RUZ4 78 aa2.2□□□□□ -2.06
CHD9-218ENST00000566029 LST1O00453 97 aa2.2□□□□□ -2.06
CHD9-218ENST00000566029 RNASE4P34096 147 aaKnown RBP2.2□□□□□ -2.06
CHD9-218ENST00000566029 C8orf49Q96NF6 230 aa2.2□□□□□ -2.06
CHD9-218ENST00000566029 F8VRH5 84 aa2.2□□□□□ -2.06
CHD9-218ENST00000566029 COX7CP15954 63 aa2.2□□□□□ -2.06
CHD9-218ENST00000566029 FAM222AQ5U5X8 452 aa2.2□□□□□ -2.06
CHD9-218ENST00000566029 IGHV3OR16-13A0A075B7E8 117 aa2.2□□□□□ -2.06
CHD9-218ENST00000566029 IGHV3OR16-8A0A075B7F1 116 aa2.2□□□□□ -2.06
CHD9-218ENST00000566029 HCP5Q6MZN7 132 aa2.2□□□□□ -2.06
CHD9-218ENST00000566029 C11orf86A6NJI1 115 aa2.2□□□□□ -2.06
CHD9-218ENST00000566029 IGKV1-16P04430 117 aa2.2□□□□□ -2.06
CHD9-218ENST00000566029 Q6ZS46 218 aa2.2□□□□□ -2.06
CHD9-218ENST00000566029 IGKV2-40A0A087WW87 121 aaPredicted RBP2.19□□□□□ -2.06
CHD9-218ENST00000566029 IGHV3-73A0A0B4J1V6 119 aa2.19□□□□□ -2.06
CHD9-218ENST00000566029 TSHBP01222 138 aa2.19□□□□□ -2.06
CHD9-218ENST00000566029 IGKV2D-40P01614 121 aaPredicted RBP2.19□□□□□ -2.06
CHD9-218ENST00000566029 GRNP28799 593 aaKnown RBP2.19□□□□□ -2.06
CHD9-218ENST00000566029 SERP2Q8N6R1 65 aa2.19□□□□□ -2.06
CHD9-218ENST00000566029 I3L2K1 104 aa2.19□□□□□ -2.06
CHD9-218ENST00000566029 BLCAPP62952 87 aa2.19□□□□□ -2.06
CHD9-218ENST00000566029 ZNF22P17026 224 aaPredicted RBP2.19□□□□□ -2.06
CHD9-218ENST00000566029 PYGO1Q9Y3Y4 419 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 178.7 ms