RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 TRBV27A0A0K0K1C4 114 aa14.13□□□□□ -0.15
SHCBP1-205ENST00000566016 TMEM262E9PQX1 116 aa14.13□□□□□ -0.15
SHCBP1-205ENST00000566016 I3L3M4 83 aa14.13□□□□□ -0.15
SHCBP1-205ENST00000566016 AMTP48728 403 aa14.13□□□□□ -0.15
SHCBP1-205ENST00000566016 POLR2KP53803 58 aaKnown RBP14.13□□□□□ -0.15
SHCBP1-205ENST00000566016 PPBPP02775 128 aa14.12□□□□□ -0.15
SHCBP1-205ENST00000566016 TRBV24-1A0A075B6N3 115 aa14.12□□□□□ -0.15
SHCBP1-205ENST00000566016 C7orf77A4D0Y5 90 aa14.12□□□□□ -0.15
SHCBP1-205ENST00000566016 SMKR1H3BMG3 65 aa14.12□□□□□ -0.15
SHCBP1-205ENST00000566016 CKS2P33552 79 aa14.12□□□□□ -0.15
SHCBP1-205ENST00000566016 SUMO2P61956 95 aaKnown RBP14.12□□□□□ -0.15
SHCBP1-205ENST00000566016 CLRN3Q8NCR9 226 aa14.12□□□□□ -0.15
SHCBP1-205ENST00000566016 Q9HAA7 133 aa14.12□□□□□ -0.15
SHCBP1-205ENST00000566016 KLK12Q9UKR0 248 aa14.12□□□□□ -0.15
SHCBP1-205ENST00000566016 ATRAIDQ6UW56 229 aa14.11□□□□□ -0.15
SHCBP1-205ENST00000566016 A0A1B0GUV1 79 aa14.1□□□□□ -0.15
SHCBP1-205ENST00000566016 PHOX2AO14813 284 aa14.1□□□□□ -0.15
SHCBP1-205ENST00000566016 APCSP02743 223 aa14.1□□□□□ -0.15
SHCBP1-205ENST00000566016 PMCHP20382 165 aa14.1□□□□□ -0.15
SHCBP1-205ENST00000566016 RBX1P62877 108 aa14.1□□□□□ -0.15
SHCBP1-205ENST00000566016 GAGE6Q13070 117 aa14.1□□□□□ -0.15
SHCBP1-205ENST00000566016 NDUFA5Q16718 116 aa14.1□□□□□ -0.15
SHCBP1-205ENST00000566016 C20orf78Q9BR46 151 aa14.1□□□□□ -0.15
SHCBP1-205ENST00000566016 RPL32P62910 135 aaKnown RBP14.09□□□□□ -0.15
SHCBP1-205ENST00000566016 Q0VG73 95 aa14.09□□□□□ -0.15
SHCBP1-205ENST00000566016 Q8N976 141 aa14.09□□□□□ -0.15
SHCBP1-205ENST00000566016 TM2D2Q9BX73 214 aa14.09□□□□□ -0.15
SHCBP1-205ENST00000566016 D6R8Y8 96 aa14.08□□□□□ -0.16
SHCBP1-205ENST00000566016 H7C423 109 aa14.08□□□□□ -0.16
SHCBP1-205ENST00000566016 VCYO14598 125 aa14.08□□□□□ -0.16
SHCBP1-205ENST00000566016 UBE2L6O14933 153 aa14.08□□□□□ -0.16
SHCBP1-205ENST00000566016 TSHBP01222 138 aa14.08□□□□□ -0.16
SHCBP1-205ENST00000566016 ANGP03950 147 aaKnown RBP14.08□□□□□ -0.16
SHCBP1-205ENST00000566016 S100PP25815 95 aa14.08□□□□□ -0.16
SHCBP1-205ENST00000566016 COX11Q9Y6N1 276 aa14.08□□□□□ -0.16
SHCBP1-205ENST00000566016 ORMDL3Q8N138 153 aa14.07□□□□□ -0.16
SHCBP1-205ENST00000566016 SVBPQ8N300 66 aa14.07□□□□□ -0.16
SHCBP1-205ENST00000566016 DEFB104AQ8WTQ1 72 aa14.07□□□□□ -0.16
SHCBP1-205ENST00000566016 RMI2Q96E14 147 aa14.07□□□□□ -0.16
SHCBP1-205ENST00000566016 PRR34Q9NV39 138 aa14.07□□□□□ -0.16
SHCBP1-205ENST00000566016 PSCAO43653 123 aa14.06□□□□□ -0.16
SHCBP1-205ENST00000566016 TNFRSF6BO95407 300 aa14.06□□□□□ -0.16
SHCBP1-205ENST00000566016 APOC3P02656 99 aa14.06□□□□□ -0.16
SHCBP1-205ENST00000566016 UBE2WQ96B02 151 aa14.06□□□□□ -0.16
SHCBP1-205ENST00000566016 SNAPINO95295 136 aa14.06□□□□□ -0.16
SHCBP1-205ENST00000566016 CRPP02741 224 aa14.06□□□□□ -0.16
SHCBP1-205ENST00000566016 ESDP10768 282 aa14.06□□□□□ -0.16
SHCBP1-205ENST00000566016 KIR2DL4Q99706 377 aa14.06□□□□□ -0.16
SHCBP1-205ENST00000566016 RPS10P5Q9NQ39 176 aa14.06□□□□□ -0.16
SHCBP1-205ENST00000566016 LAMTOR2Q9Y2Q5 125 aa14.06□□□□□ -0.16
SHCBP1-205ENST00000566016 DNAH11Q96DT5 4516 aa14.05□□□□□ -0.16
SHCBP1-205ENST00000566016 BIRC6Q9NR09 4857 aa14.05□□□□□ -0.16
SHCBP1-205ENST00000566016 A0A087WTM6 91 aa14.04□□□□□ -0.16
SHCBP1-205ENST00000566016 EREGO14944 169 aa14.04□□□□□ -0.16
SHCBP1-205ENST00000566016 TCAPO15273 167 aa14.04□□□□□ -0.16
SHCBP1-205ENST00000566016 NPYP01303 97 aa14.04□□□□□ -0.16
SHCBP1-205ENST00000566016 MIAQ16674 131 aa14.04□□□□□ -0.16
SHCBP1-205ENST00000566016 ENHOQ6UWT2 76 aa14.04□□□□□ -0.16
SHCBP1-205ENST00000566016 TMEM136Q6ZRR5 245 aa14.04□□□□□ -0.16
SHCBP1-205ENST00000566016 C20orf203Q8NBC4 194 aa14.04□□□□□ -0.16
SHCBP1-205ENST00000566016 SMIM2Q9BVW6 85 aa14.03□□□□□ -0.16
SHCBP1-205ENST00000566016 IGLV4-60A0A075B6I1 120 aa14.02□□□□□ -0.16
SHCBP1-205ENST00000566016 ZNF25P17030 456 aaPredicted RBP14.02□□□□□ -0.16
SHCBP1-205ENST00000566016 LINC00269Q8N2A0 174 aa14.02□□□□□ -0.16
SHCBP1-205ENST00000566016 PRELID3AQ96N28 172 aa14.02□□□□□ -0.16
SHCBP1-205ENST00000566016 LRCOL1A6NCL2 159 aa14.01□□□□□ -0.17
SHCBP1-205ENST00000566016 FCER1GP30273 86 aa14.01□□□□□ -0.17
SHCBP1-205ENST00000566016 COX19Q49B96 90 aa14.01□□□□□ -0.17
SHCBP1-205ENST00000566016 IGKV2D-24A0A075B6R9 120 aa14□□□□□ -0.17
SHCBP1-205ENST00000566016 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14□□□□□ -0.17
SHCBP1-205ENST00000566016 IGKV2-29A2NJV5 120 aaPredicted RBP14□□□□□ -0.17
SHCBP1-205ENST00000566016 HLA-DQA1P01909 254 aa14□□□□□ -0.17
SHCBP1-205ENST00000566016 FGF6P10767 208 aa14□□□□□ -0.17
SHCBP1-205ENST00000566016 AMMECR1LQ6DCA0 310 aa14□□□□□ -0.17
SHCBP1-205ENST00000566016 C1orf43Q9BWL3 253 aa14□□□□□ -0.17
SHCBP1-205ENST00000566016 PRSS47A8MTI9 375 aa13.99□□□□□ -0.17
SHCBP1-205ENST00000566016 REG3AQ06141 175 aa13.99□□□□□ -0.17
SHCBP1-205ENST00000566016 MRPL52Q86TS9 123 aaKnown RBP13.99□□□□□ -0.17
SHCBP1-205ENST00000566016 GNB1LQ9BYB4 327 aa13.99□□□□□ -0.17
SHCBP1-205ENST00000566016 SPATA12Q7Z6I5 190 aa13.99□□□□□ -0.17
SHCBP1-205ENST00000566016 TRAV8-4A0A0B4J246 113 aa13.97□□□□□ -0.17
SHCBP1-205ENST00000566016 MT-ND6P03923 174 aa13.97□□□□□ -0.17
SHCBP1-205ENST00000566016 CDPF1Q6NVV7 123 aa13.97□□□□□ -0.17
SHCBP1-205ENST00000566016 RNASEKQ6P5S7 137 aaKnown RBP13.97□□□□□ -0.17
SHCBP1-205ENST00000566016 CLPSL2Q6UWE3 100 aa13.97□□□□□ -0.17
SHCBP1-205ENST00000566016 MAPKAPK5-AS1Q8N8E1 139 aa13.97□□□□□ -0.17
SHCBP1-205ENST00000566016 KRTAP10-2P60368 255 aa13.96□□□□□ -0.17
SHCBP1-205ENST00000566016 SMAGPQ0VAQ4 97 aa13.96□□□□□ -0.17
SHCBP1-205ENST00000566016 MAP1LC3AQ9H492 121 aa13.96□□□□□ -0.17
SHCBP1-205ENST00000566016 PGPEP1Q9NXJ5 209 aa13.96□□□□□ -0.17
SHCBP1-205ENST00000566016 CSDC2Q9Y534 153 aaKnown RBP13.96□□□□□ -0.17
SHCBP1-205ENST00000566016 SLC7A5P1Q8MH63 180 aa13.95□□□□□ -0.18
SHCBP1-205ENST00000566016 OR5A1Q8NGJ0 315 aa13.94□□□□□ -0.18
SHCBP1-205ENST00000566016 TMEM18Q96B42 140 aa13.94□□□□□ -0.18
SHCBP1-205ENST00000566016 TMEM101Q96IK0 257 aa13.94□□□□□ -0.18
SHCBP1-205ENST00000566016 DYNC1H1Q14204 4646 aaKnown RBP13.94□□□□□ -0.18
SHCBP1-205ENST00000566016 KRTAP26-1Q6PEX3 210 aa13.93□□□□□ -0.18
SHCBP1-205ENST00000566016 Q8N814 137 aa13.93□□□□□ -0.18
SHCBP1-205ENST00000566016 C16orf90A8MZG2 172 aa13.93□□□□□ -0.18
SHCBP1-205ENST00000566016 NTN5Q8WTR8 489 aaPredicted RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms