RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 UFSP1Q6NVU6 142 aa5.85□□□□□ -1.47
VPS9D1-205ENST00000565452 RMI2Q96E14 147 aa5.85□□□□□ -1.47
VPS9D1-205ENST00000565452 TPPP3Q9BW30 176 aa5.85□□□□□ -1.47
VPS9D1-205ENST00000565452 A0A087WWC5 75 aa5.84□□□□□ -1.47
VPS9D1-205ENST00000565452 TRBV10-1A0A0K0K1A3 114 aa5.84□□□□□ -1.47
VPS9D1-205ENST00000565452 H7C1H1 209 aa5.84□□□□□ -1.47
VPS9D1-205ENST00000565452 SLC25A29Q8N8R3 303 aa5.84□□□□□ -1.47
VPS9D1-205ENST00000565452 NUP35Q8NFH5 326 aa5.84□□□□□ -1.47
VPS9D1-205ENST00000565452 PGLYRP4Q96LB8 373 aa5.84□□□□□ -1.47
VPS9D1-205ENST00000565452 KIF25-AS1Q9Y6Z4 181 aa5.84□□□□□ -1.47
VPS9D1-205ENST00000565452 MUC2Q02817 5179 aa5.84□□□□□ -1.48
VPS9D1-205ENST00000565452 TRAV9-1A0A075B6T8 112 aa5.83□□□□□ -1.48
VPS9D1-205ENST00000565452 SNAPINO95295 136 aa5.83□□□□□ -1.48
VPS9D1-205ENST00000565452 ADCYAP1P18509 176 aa5.83□□□□□ -1.48
VPS9D1-205ENST00000565452 RHEBQ15382 184 aa5.83□□□□□ -1.48
VPS9D1-205ENST00000565452 C14orf177Q52M58 125 aa5.83□□□□□ -1.48
VPS9D1-205ENST00000565452 FAM74A4Q5TZK3 123 aa5.83□□□□□ -1.48
VPS9D1-205ENST00000565452 ATP5L2Q7Z4Y8 100 aa5.83□□□□□ -1.48
VPS9D1-205ENST00000565452 SVBPQ8N300 66 aa5.83□□□□□ -1.48
VPS9D1-205ENST00000565452 C14orf178Q8N769 122 aaPredicted RBP5.83□□□□□ -1.48
VPS9D1-205ENST00000565452 SAMD10Q9BYL1 202 aa5.83□□□□□ -1.48
VPS9D1-205ENST00000565452 TMEM191AQ9H0A3 160 aa5.83□□□□□ -1.48
VPS9D1-205ENST00000565452 JPT2Q9H910 190 aa5.83□□□□□ -1.48
VPS9D1-205ENST00000565452 A0A087WWL8 130 aa5.82□□□□□ -1.48
VPS9D1-205ENST00000565452 MUC21A0A0G2JKD1 596 aa5.82□□□□□ -1.48
VPS9D1-205ENST00000565452 LOC100131303A0A0U1RQF7 123 aa5.82□□□□□ -1.48
VPS9D1-205ENST00000565452 MUC21A0A140T8X8 626 aa5.82□□□□□ -1.48
VPS9D1-205ENST00000565452 F5H697 171 aa5.82□□□□□ -1.48
VPS9D1-205ENST00000565452 SSTP61278 116 aa5.82□□□□□ -1.48
VPS9D1-205ENST00000565452 ODF1Q14990 250 aa5.82□□□□□ -1.48
VPS9D1-205ENST00000565452 KCNIP4Q6PIL6 250 aa5.82□□□□□ -1.48
VPS9D1-205ENST00000565452 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.82□□□□□ -1.48
VPS9D1-205ENST00000565452 CLRN3Q8NCR9 226 aa5.82□□□□□ -1.48
VPS9D1-205ENST00000565452 BTF3L4Q96K17 158 aa5.82□□□□□ -1.48
VPS9D1-205ENST00000565452 DNAJC30Q96LL9 226 aa5.82□□□□□ -1.48
VPS9D1-205ENST00000565452 TRBV7-3A0A075B6L6 115 aa5.81□□□□□ -1.48
VPS9D1-205ENST00000565452 IGHV3-73A0A0B4J1V6 119 aa5.81□□□□□ -1.48
VPS9D1-205ENST00000565452 C7orf77A4D0Y5 90 aa5.81□□□□□ -1.48
VPS9D1-205ENST00000565452 PPP1R17O96001 155 aa5.81□□□□□ -1.48
VPS9D1-205ENST00000565452 APOC3P02656 99 aa5.81□□□□□ -1.48
VPS9D1-205ENST00000565452 S100PP25815 95 aa5.81□□□□□ -1.48
VPS9D1-205ENST00000565452 RPL36AP83881 106 aaKnown RBP5.81□□□□□ -1.48
VPS9D1-205ENST00000565452 ZNF56Q15929 161 aa5.81□□□□□ -1.48
VPS9D1-205ENST00000565452 RASL11AQ6T310 242 aa5.81□□□□□ -1.48
VPS9D1-205ENST00000565452 RPL36ALQ969Q0 106 aaKnown RBP5.81□□□□□ -1.48
VPS9D1-205ENST00000565452 GTSF1LQ9H1H1 148 aa5.81□□□□□ -1.48
VPS9D1-205ENST00000565452 IGKV2D-24A0A075B6R9 120 aa5.8□□□□□ -1.48
VPS9D1-205ENST00000565452 KRTAP10-8P60410 259 aa5.8□□□□□ -1.48
VPS9D1-205ENST00000565452 COX19Q49B96 90 aa5.8□□□□□ -1.48
VPS9D1-205ENST00000565452 TMEM97Q5BJF2 176 aa5.8□□□□□ -1.48
VPS9D1-205ENST00000565452 DAZ4Q86SG3 579 aaKnown RBP5.8□□□□□ -1.48
VPS9D1-205ENST00000565452 SLC7A5P1Q8MH63 180 aa5.8□□□□□ -1.48
VPS9D1-205ENST00000565452 GATD1Q8NB37 220 aa5.8□□□□□ -1.48
VPS9D1-205ENST00000565452 DPH3Q96FX2 82 aa5.8□□□□□ -1.48
VPS9D1-205ENST00000565452 NIT2Q9NQR4 276 aa5.8□□□□□ -1.48
VPS9D1-205ENST00000565452 DAZ3Q9NR90 486 aaKnown RBP5.8□□□□□ -1.48
VPS9D1-205ENST00000565452 A0A0J9YXV3 536 aa5.79□□□□□ -1.48
VPS9D1-205ENST00000565452 M0QY20 66 aa5.79□□□□□ -1.48
VPS9D1-205ENST00000565452 HBBP68871 147 aa5.79□□□□□ -1.48
VPS9D1-205ENST00000565452 FAM104BQ5XKR9 115 aa5.79□□□□□ -1.48
VPS9D1-205ENST00000565452 DGAT2L7PQ6IED9 249 aa5.79□□□□□ -1.48
VPS9D1-205ENST00000565452 MRAP2Q96G30 205 aa5.79□□□□□ -1.48
VPS9D1-205ENST00000565452 RPS10P5Q9NQ39 176 aa5.79□□□□□ -1.48
VPS9D1-205ENST00000565452 A0A1B0GXF2 115 aa5.78□□□□□ -1.48
VPS9D1-205ENST00000565452 PPBPP02775 128 aa5.78□□□□□ -1.48
VPS9D1-205ENST00000565452 MGPP08493 103 aa5.78□□□□□ -1.48
VPS9D1-205ENST00000565452 RAB4AP20338 218 aa5.78□□□□□ -1.48
VPS9D1-205ENST00000565452 UBE2D3P61077 147 aa5.78□□□□□ -1.48
VPS9D1-205ENST00000565452 UBE2D2P62837 147 aa5.78□□□□□ -1.48
VPS9D1-205ENST00000565452 NEXN-AS1Q8NBZ9 246 aa5.78□□□□□ -1.48
VPS9D1-205ENST00000565452 LINC00694P0DN24 101 aa5.77□□□□□ -1.49
VPS9D1-205ENST00000565452 CAMPP49913 170 aa5.77□□□□□ -1.49
VPS9D1-205ENST00000565452 SUMO4Q6EEV6 95 aa5.77□□□□□ -1.49
VPS9D1-205ENST00000565452 MRPL54Q6P161 138 aaKnown RBP5.77□□□□□ -1.49
VPS9D1-205ENST00000565452 REG3GQ6UW15 175 aa5.77□□□□□ -1.49
VPS9D1-205ENST00000565452 URGCP-MRPS24S4R325 110 aa5.77□□□□□ -1.49
VPS9D1-205ENST00000565452 LPAP08519 4548 aa5.76□□□□□ -1.49
VPS9D1-205ENST00000565452 TRBV24-1A0A075B6N3 115 aa5.76□□□□□ -1.49
VPS9D1-205ENST00000565452 TRBV6-5A0A0K0K1A5 114 aa5.76□□□□□ -1.49
VPS9D1-205ENST00000565452 GAGE12JA6NER3 117 aa5.76□□□□□ -1.49
VPS9D1-205ENST00000565452 PHOX2AO14813 284 aa5.76□□□□□ -1.49
VPS9D1-205ENST00000565452 PKIAP61925 76 aa5.76□□□□□ -1.49
VPS9D1-205ENST00000565452 GAGE1Q13065 139 aa5.76□□□□□ -1.49
VPS9D1-205ENST00000565452 GAGE4Q13068 117 aa5.76□□□□□ -1.49
VPS9D1-205ENST00000565452 GAGE5Q13069 117 aa5.76□□□□□ -1.49
VPS9D1-205ENST00000565452 GAGE13Q4V321 117 aa5.76□□□□□ -1.49
VPS9D1-205ENST00000565452 Q8N3U1 123 aa5.76□□□□□ -1.49
VPS9D1-205ENST00000565452 C9orf163Q8N9P6 203 aa5.76□□□□□ -1.49
VPS9D1-205ENST00000565452 RNF185Q96GF1 192 aa5.76□□□□□ -1.49
VPS9D1-205ENST00000565452 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.76□□□□□ -1.49
VPS9D1-205ENST00000565452 TCAPO15273 167 aa5.75□□□□□ -1.49
VPS9D1-205ENST00000565452 CKS2P33552 79 aa5.75□□□□□ -1.49
VPS9D1-205ENST00000565452 ELOBQ15370 118 aa5.75□□□□□ -1.49
VPS9D1-205ENST00000565452 MRPL51Q4U2R6 128 aaKnown RBP5.75□□□□□ -1.49
VPS9D1-205ENST00000565452 LCE2AQ5TA79 106 aaPredicted RBP5.75□□□□□ -1.49
VPS9D1-205ENST00000565452 SDIM1Q6ZPB5 146 aa5.75□□□□□ -1.49
VPS9D1-205ENST00000565452 AMN1Q8IY45 258 aa5.75□□□□□ -1.49
VPS9D1-205ENST00000565452 GNB1LQ9BYB4 327 aa5.75□□□□□ -1.49
VPS9D1-205ENST00000565452 ST20Q9HBF5 79 aa5.75□□□□□ -1.49
VPS9D1-205ENST00000565452 Q9UF83 564 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 734.8 ms