RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 MORN4Q8NDC4 146 aa0.86□□□□□ -2.27
CHD9-215ENST00000565442 ZNF431Q8TF32 576 aaPredicted RBP0.86□□□□□ -2.27
CHD9-215ENST00000565442 ISOC1Q96CN7 298 aa0.86□□□□□ -2.27
CHD9-215ENST00000565442 PPP3R2Q96LZ3 170 aa0.86□□□□□ -2.27
CHD9-215ENST00000565442 HYLS1Q96M11 299 aa0.86□□□□□ -2.27
CHD9-215ENST00000565442 SDF2Q99470 211 aa0.86□□□□□ -2.27
CHD9-215ENST00000565442 SMR3AQ99954 134 aa0.86□□□□□ -2.27
CHD9-215ENST00000565442 SPANXCQ9NY87 97 aa0.86□□□□□ -2.27
CHD9-215ENST00000565442 LAMTOR2Q9Y2Q5 125 aa0.86□□□□□ -2.27
CHD9-215ENST00000565442 ZDBF2Q9HCK1 2354 aa0.86□□□□□ -2.27
CHD9-215ENST00000565442 DSPP15924 2871 aaKnown RBP0.86□□□□□ -2.27
CHD9-215ENST00000565442 ESPL1Q14674 2120 aa0.85□□□□□ -2.27
CHD9-215ENST00000565442 ABCA2Q9BZC7 2435 aa0.85□□□□□ -2.27
CHD9-215ENST00000565442 MGAQ8IWI9 3026 aa0.85□□□□□ -2.27
CHD9-215ENST00000565442 DMXL2Q8TDJ6 3036 aa0.85□□□□□ -2.27
CHD9-215ENST00000565442 BORCS7-ASMTA0A0B4J1R7 106 aa0.85□□□□□ -2.27
CHD9-215ENST00000565442 TRAV5A0A0B4J249 113 aa0.85□□□□□ -2.27
CHD9-215ENST00000565442 TRBV7-6A0A0J9YX20 115 aa0.85□□□□□ -2.27
CHD9-215ENST00000565442 ATP6V1G2-DDX39BF2Z307 99 aa0.85□□□□□ -2.27
CHD9-215ENST00000565442 GNGT2O14610 69 aa0.85□□□□□ -2.27
CHD9-215ENST00000565442 RER1O15258 196 aa0.85□□□□□ -2.27
CHD9-215ENST00000565442 IGF2RP11717 2491 aa0.85□□□□□ -2.27
CHD9-215ENST00000565442 S100A11P31949 105 aa0.85□□□□□ -2.27
CHD9-215ENST00000565442 EIF3IQ13347 325 aaKnown RBP0.85□□□□□ -2.27
CHD9-215ENST00000565442 SMCO1Q147U7 214 aa0.85□□□□□ -2.27
CHD9-215ENST00000565442 OR8B8Q15620 311 aa0.85□□□□□ -2.27
CHD9-215ENST00000565442 MORN2Q502X0 79 aa0.85□□□□□ -2.27
CHD9-215ENST00000565442 IGSF10Q6WRI0 2623 aa0.85□□□□□ -2.27
CHD9-215ENST00000565442 SBSPONQ8IVN8 264 aa0.85□□□□□ -2.27
CHD9-215ENST00000565442 OR8J3Q8NGG0 315 aa0.85□□□□□ -2.27
CHD9-215ENST00000565442 TMEM203Q969S6 136 aa0.85□□□□□ -2.27
CHD9-215ENST00000565442 TAF9BQ9HBM6 251 aa0.85□□□□□ -2.27
CHD9-215ENST00000565442 NAT8BQ9UHF3 227 aa0.85□□□□□ -2.27
CHD9-215ENST00000565442 AP4S1Q9Y587 144 aa0.85□□□□□ -2.27
CHD9-215ENST00000565442 IER3IP1Q9Y5U9 82 aa0.85□□□□□ -2.27
CHD9-215ENST00000565442 TENM3Q9P273 2699 aa0.85□□□□□ -2.27
CHD9-215ENST00000565442 VPS13CQ709C8 3753 aa0.85□□□□□ -2.27
CHD9-215ENST00000565442 LRBAP50851 2863 aa0.85□□□□□ -2.27
CHD9-215ENST00000565442 ANKRD11Q6UB99 2663 aaPredicted RBP0.84□□□□□ -2.27
CHD9-215ENST00000565442 NINQ8N4C6 2090 aa0.84□□□□□ -2.27
CHD9-215ENST00000565442 IGLV3-32A0A0A0MS00 114 aa0.84□□□□□ -2.27
CHD9-215ENST00000565442 A0A1B0GW64 132 aa0.84□□□□□ -2.27
CHD9-215ENST00000565442 EFCAB10A6NFE3 127 aa0.84□□□□□ -2.27
CHD9-215ENST00000565442 BBIP1A8MTZ0 92 aa0.84□□□□□ -2.27
CHD9-215ENST00000565442 GABARAPH6UMI1 98 aa0.84□□□□□ -2.27
CHD9-215ENST00000565442 J3KT08 172 aa0.84□□□□□ -2.27
CHD9-215ENST00000565442 J3QLW9 94 aa0.84□□□□□ -2.27
CHD9-215ENST00000565442 K7EP13 123 aa0.84□□□□□ -2.27
CHD9-215ENST00000565442 PFDN1O60925 122 aa0.84□□□□□ -2.27
CHD9-215ENST00000565442 IFNA4P05014 189 aa0.84□□□□□ -2.27
CHD9-215ENST00000565442 DBIP07108 87 aaKnown RBP0.84□□□□□ -2.27
CHD9-215ENST00000565442 PIPP12273 146 aaPredicted RBP0.84□□□□□ -2.27
CHD9-215ENST00000565442 CKS1BP61024 79 aa0.84□□□□□ -2.27
CHD9-215ENST00000565442 SELENOWP63302 87 aa0.84□□□□□ -2.27
CHD9-215ENST00000565442 HBBP68871 147 aa0.84□□□□□ -2.27
CHD9-215ENST00000565442 GLYATL3Q5SZD4 288 aa0.84□□□□□ -2.27
CHD9-215ENST00000565442 LINC01590Q5TEZ4 76 aa0.84□□□□□ -2.27
CHD9-215ENST00000565442 C12orf73Q69YU5 71 aa0.84□□□□□ -2.27
CHD9-215ENST00000565442 OR5H6Q8NGV6 325 aa0.84□□□□□ -2.27
CHD9-215ENST00000565442 LEAP2Q969E1 77 aa0.84□□□□□ -2.27
CHD9-215ENST00000565442 DIRC1Q969H9 104 aa0.84□□□□□ -2.27
CHD9-215ENST00000565442 BORCS8Q96FH0 119 aa0.84□□□□□ -2.27
CHD9-215ENST00000565442 GSKIPQ9P0R6 139 aa0.84□□□□□ -2.27
CHD9-215ENST00000565442 GNG8Q9UK08 70 aa0.84□□□□□ -2.27
CHD9-215ENST00000565442 TRAPPC2LQ9UL33 140 aa0.84□□□□□ -2.27
CHD9-215ENST00000565442 LSM2Q9Y333 95 aaKnown RBP0.84□□□□□ -2.27
CHD9-215ENST00000565442 CACNA1EQ15878 2313 aa0.84□□□□□ -2.28
CHD9-215ENST00000565442 GCN1Q92616 2671 aaKnown RBP0.84□□□□□ -2.28
CHD9-215ENST00000565442 PRRC2CQ9Y520 2896 aaKnown RBP0.84□□□□□ -2.28
CHD9-215ENST00000565442 A0A0C4DFX4 3053 aa0.84□□□□□ -2.28
CHD9-215ENST00000565442 F5P12259 2224 aa0.84□□□□□ -2.28
CHD9-215ENST00000565442 UBR5O95071 2799 aaPredicted RBP0.84□□□□□ -2.28
CHD9-215ENST00000565442 MAP1BP46821 2468 aaKnown RBP0.83□□□□□ -2.28
CHD9-215ENST00000565442 SVEP1Q4LDE5 3571 aa0.83□□□□□ -2.28
CHD9-215ENST00000565442 NCOR2Q9Y618 2525 aa0.83□□□□□ -2.28
CHD9-215ENST00000565442 CFAP46Q8IYW2 2715 aa0.83□□□□□ -2.28
CHD9-215ENST00000565442 AKAP9Q99996 3911 aa0.83□□□□□ -2.28
CHD9-215ENST00000565442 PDZD2O15018 2839 aa0.83□□□□□ -2.28
CHD9-215ENST00000565442 CELSR1Q9NYQ6 3014 aa0.83□□□□□ -2.28
CHD9-215ENST00000565442 LOC100130705A0A1B0GUX0 176 aa0.83□□□□□ -2.28
CHD9-215ENST00000565442 LOC107986453A0A1B0GWG9 222 aa0.83□□□□□ -2.28
CHD9-215ENST00000565442 hDV103S1A0JD37 113 aa0.83□□□□□ -2.28
CHD9-215ENST00000565442 TMEM189A5PLL7 270 aa0.83□□□□□ -2.28
CHD9-215ENST00000565442 C9JAW5 83 aa0.83□□□□□ -2.28
CHD9-215ENST00000565442 PIN1P1O15428 100 aa0.83□□□□□ -2.28
CHD9-215ENST00000565442 HIST1H2BKO60814 126 aa0.83□□□□□ -2.28
CHD9-215ENST00000565442 HIST1H2BJP06899 126 aa0.83□□□□□ -2.28
CHD9-215ENST00000565442 APELAP0DMC3 54 aa0.83□□□□□ -2.28
CHD9-215ENST00000565442 SRP9P49458 86 aaKnown RBP0.83□□□□□ -2.28
CHD9-215ENST00000565442 DIAPH2-AS1Q14236 149 aa0.83□□□□□ -2.28
CHD9-215ENST00000565442 SMIM21Q3B7S5 101 aa0.83□□□□□ -2.28
CHD9-215ENST00000565442 PIGYQ3MUY2 71 aa0.83□□□□□ -2.28
CHD9-215ENST00000565442 SPINK9Q5DT21 86 aa0.83□□□□□ -2.28
CHD9-215ENST00000565442 OR2T2Q6IF00 324 aa0.83□□□□□ -2.28
CHD9-215ENST00000565442 TMEM91Q6ZNR0 172 aa0.83□□□□□ -2.28
CHD9-215ENST00000565442 Q6ZS92 163 aa0.83□□□□□ -2.28
CHD9-215ENST00000565442 CROCCP2Q86T23 111 aa0.83□□□□□ -2.28
CHD9-215ENST00000565442 FAM216BQ8N7L0 139 aa0.83□□□□□ -2.28
CHD9-215ENST00000565442 OR2H1Q9GZK4 316 aa0.83□□□□□ -2.28
CHD9-215ENST00000565442 WFDC10AQ9H1F0 79 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms