RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 NIT2Q9NQR4 276 aa6.51□□□□□ -1.37
CMTM3-209ENST00000565003 IGLV4-60A0A075B6I1 120 aa6.5□□□□□ -1.37
CMTM3-209ENST00000565003 TRAV26-2A0A0B4J265 109 aa6.5□□□□□ -1.37
CMTM3-209ENST00000565003 PRSS47A8MTI9 375 aa6.5□□□□□ -1.37
CMTM3-209ENST00000565003 PRSS1P07477 247 aa6.5□□□□□ -1.37
CMTM3-209ENST00000565003 REG3AQ06141 175 aa6.5□□□□□ -1.37
CMTM3-209ENST00000565003 TWIST1Q15672 202 aa6.5□□□□□ -1.37
CMTM3-209ENST00000565003 GATD1Q8NB37 220 aa6.5□□□□□ -1.37
CMTM3-209ENST00000565003 CIRBP-AS1Q8TBR5 109 aa6.5□□□□□ -1.37
CMTM3-209ENST00000565003 GTSF1Q8WW33 167 aa6.5□□□□□ -1.37
CMTM3-209ENST00000565003 PGLYRP4Q96LB8 373 aa6.5□□□□□ -1.37
CMTM3-209ENST00000565003 TMEM243Q9BU79 118 aa6.5□□□□□ -1.37
CMTM3-209ENST00000565003 IGLV10-54A0A075B6I4 117 aa6.49□□□□□ -1.37
CMTM3-209ENST00000565003 TMEM250H0YL14 139 aa6.49□□□□□ -1.37
CMTM3-209ENST00000565003 KRTAP10-4P60372 401 aaPredicted RBP6.49□□□□□ -1.37
CMTM3-209ENST00000565003 BLOC1S1P78537 153 aa6.49□□□□□ -1.37
CMTM3-209ENST00000565003 CFAP161Q6P656 301 aa6.49□□□□□ -1.37
CMTM3-209ENST00000565003 LYPD6BQ8NI32 183 aa6.49□□□□□ -1.37
CMTM3-209ENST00000565003 A0A1B0GUV1 79 aa6.48□□□□□ -1.37
CMTM3-209ENST00000565003 AMTP48728 403 aa6.48□□□□□ -1.37
CMTM3-209ENST00000565003 FOXA3P55318 350 aaPredicted RBP6.48□□□□□ -1.37
CMTM3-209ENST00000565003 CTAG1AP78358 180 aa6.48□□□□□ -1.37
CMTM3-209ENST00000565003 COTL1Q14019 142 aa6.48□□□□□ -1.37
CMTM3-209ENST00000565003 RPL39LQ96EH5 51 aaKnown RBP6.48□□□□□ -1.37
CMTM3-209ENST00000565003 GATCO43716 136 aaKnown RBP6.47□□□□□ -1.37
CMTM3-209ENST00000565003 CEBPGP53567 150 aa6.47□□□□□ -1.37
CMTM3-209ENST00000565003 DGAT2L7PQ6IED9 249 aa6.47□□□□□ -1.37
CMTM3-209ENST00000565003 FAM231DQ6ZW35 169 aa6.47□□□□□ -1.37
CMTM3-209ENST00000565003 C9orf163Q8N9P6 203 aa6.47□□□□□ -1.37
CMTM3-209ENST00000565003 TRAV8-4A0A0B4J246 113 aa6.46□□□□□ -1.38
CMTM3-209ENST00000565003 PANO1I0J062 215 aa6.46□□□□□ -1.38
CMTM3-209ENST00000565003 UBE2L6O14933 153 aa6.46□□□□□ -1.38
CMTM3-209ENST00000565003 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.46□□□□□ -1.38
CMTM3-209ENST00000565003 A8MWL6 223 aa6.45□□□□□ -1.38
CMTM3-209ENST00000565003 GAS8-AS1O95177 125 aa6.45□□□□□ -1.38
CMTM3-209ENST00000565003 CT83Q5H943 113 aa6.45□□□□□ -1.38
CMTM3-209ENST00000565003 LINC01551Q86U37 167 aa6.45□□□□□ -1.38
CMTM3-209ENST00000565003 CLRN3Q8NCR9 226 aa6.45□□□□□ -1.38
CMTM3-209ENST00000565003 SMIM7Q9BQ49 75 aa6.45□□□□□ -1.38
CMTM3-209ENST00000565003 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.44□□□□□ -1.38
CMTM3-209ENST00000565003 hDV102S1A0JD36 115 aa6.44□□□□□ -1.38
CMTM3-209ENST00000565003 IGKV2-29A2NJV5 120 aaPredicted RBP6.44□□□□□ -1.38
CMTM3-209ENST00000565003 SDHAF1A6NFY7 115 aa6.44□□□□□ -1.38
CMTM3-209ENST00000565003 KRTAP29-1A8MX34 341 aaPredicted RBP6.44□□□□□ -1.38
CMTM3-209ENST00000565003 J3QL48 77 aa6.44□□□□□ -1.38
CMTM3-209ENST00000565003 CNBPP62633 177 aaKnown RBP6.44□□□□□ -1.38
CMTM3-209ENST00000565003 SDIM1Q6ZPB5 146 aa6.44□□□□□ -1.38
CMTM3-209ENST00000565003 SMIM15Q7Z3B0 74 aa6.44□□□□□ -1.38
CMTM3-209ENST00000565003 EIF5A2Q9GZV4 153 aaKnown RBP6.44□□□□□ -1.38
CMTM3-209ENST00000565003 IGKV3OR2-268A0A0C4DH90 116 aa6.43□□□□□ -1.38
CMTM3-209ENST00000565003 A0A1B0GVG6 124 aa6.43□□□□□ -1.38
CMTM3-209ENST00000565003 HIGD1CA8MV81 97 aa6.43□□□□□ -1.38
CMTM3-209ENST00000565003 NCR2O95944 276 aa6.43□□□□□ -1.38
CMTM3-209ENST00000565003 APCSP02743 223 aa6.43□□□□□ -1.38
CMTM3-209ENST00000565003 SLPIP03973 132 aa6.43□□□□□ -1.38
CMTM3-209ENST00000565003 TEX261Q6UWH6 196 aa6.43□□□□□ -1.38
CMTM3-209ENST00000565003 C15orf56Q8N910 161 aa6.43□□□□□ -1.38
CMTM3-209ENST00000565003 TSKUQ8WUA8 353 aa6.43□□□□□ -1.38
CMTM3-209ENST00000565003 TRBV6-5A0A0K0K1A5 114 aa6.42□□□□□ -1.38
CMTM3-209ENST00000565003 FAM231BA6NCW3 169 aa6.42□□□□□ -1.38
CMTM3-209ENST00000565003 GAGE12HA6NDE8 117 aa6.42□□□□□ -1.38
CMTM3-209ENST00000565003 ZNF727A8MUV8 499 aa6.42□□□□□ -1.38
CMTM3-209ENST00000565003 NDUFS6O75380 124 aaKnown RBP6.42□□□□□ -1.38
CMTM3-209ENST00000565003 SRP19P09132 144 aaKnown RBP6.42□□□□□ -1.38
CMTM3-209ENST00000565003 FGF6P10767 208 aa6.42□□□□□ -1.38
CMTM3-209ENST00000565003 AMMECR1LQ6DCA0 310 aa6.42□□□□□ -1.38
CMTM3-209ENST00000565003 RNASEKQ6P5S7 137 aaKnown RBP6.42□□□□□ -1.38
CMTM3-209ENST00000565003 RNF185Q96GF1 192 aa6.42□□□□□ -1.38
CMTM3-209ENST00000565003 A0A1B0GUT8 65 aa6.41□□□□□ -1.38
CMTM3-209ENST00000565003 H7C423 109 aa6.41□□□□□ -1.38
CMTM3-209ENST00000565003 I3L3M4 83 aa6.41□□□□□ -1.38
CMTM3-209ENST00000565003 PMCHP20382 165 aa6.41□□□□□ -1.38
CMTM3-209ENST00000565003 RPS10P46783 165 aaKnown RBP6.41□□□□□ -1.38
CMTM3-209ENST00000565003 HNRNPA3P51991 378 aaKnown RBP6.41□□□□□ -1.38
CMTM3-209ENST00000565003 RPL37AP61513 92 aaKnown RBP6.41□□□□□ -1.38
CMTM3-209ENST00000565003 CIRBPQ14011 172 aaKnown RBP6.41□□□□□ -1.38
CMTM3-209ENST00000565003 ANKRD39Q53RE8 183 aa6.41□□□□□ -1.38
CMTM3-209ENST00000565003 BORCS7Q96B45 105 aa6.41□□□□□ -1.38
CMTM3-209ENST00000565003 OSTCQ9NRP0 149 aa6.41□□□□□ -1.38
CMTM3-209ENST00000565003 V9GYV3 84 aa6.41□□□□□ -1.38
CMTM3-209ENST00000565003 LRP1Q07954 4544 aaKnown RBP6.4□□□□□ -1.38
CMTM3-209ENST00000565003 IGHV3-64A0A075B6Q5 118 aa6.4□□□□□ -1.38
CMTM3-209ENST00000565003 TSHBP01222 138 aa6.4□□□□□ -1.38
CMTM3-209ENST00000565003 CHTF8P0CG12 524 aa6.4□□□□□ -1.38
CMTM3-209ENST00000565003 RAB4AP20338 218 aa6.4□□□□□ -1.38
CMTM3-209ENST00000565003 AMN1Q8IY45 258 aa6.4□□□□□ -1.38
CMTM3-209ENST00000565003 CHCHD10Q8WYQ3 142 aaPredicted RBP6.4□□□□□ -1.38
CMTM3-209ENST00000565003 TMEM191AQ9H0A3 160 aa6.4□□□□□ -1.38
CMTM3-209ENST00000565003 AP5S1Q9NUS5 200 aa6.4□□□□□ -1.38
CMTM3-209ENST00000565003 TMEM242Q9NWH2 141 aa6.4□□□□□ -1.38
CMTM3-209ENST00000565003 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.39□□□□□ -1.39
CMTM3-209ENST00000565003 C9JQL5 133 aa6.39□□□□□ -1.39
CMTM3-209ENST00000565003 ESDP10768 282 aa6.39□□□□□ -1.39
CMTM3-209ENST00000565003 ZNF25P17030 456 aaPredicted RBP6.39□□□□□ -1.39
CMTM3-209ENST00000565003 POLR2KP53803 58 aaKnown RBP6.39□□□□□ -1.39
CMTM3-209ENST00000565003 FOXI1Q12951 378 aa6.39□□□□□ -1.39
CMTM3-209ENST00000565003 HIGD2BQ4VC39 106 aa6.39□□□□□ -1.39
CMTM3-209ENST00000565003 SPACA4Q8TDM5 124 aa6.39□□□□□ -1.39
CMTM3-209ENST00000565003 ISOC2Q96AB3 205 aa6.39□□□□□ -1.39
CMTM3-209ENST00000565003 ST20Q9HBF5 79 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms