RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 BEX4Q9NWD9 120 aaPredicted RBP11.33□□□□□ -0.6
GTF3C1-205ENST00000564747 MUSTN1Q8IVN3 82 aa11.33□□□□□ -0.6
GTF3C1-205ENST00000564747 RNASE13Q5GAN3 156 aaKnown RBP11.32□□□□□ -0.6
GTF3C1-205ENST00000564747 CUBNO60494 3623 aa11.32□□□□□ -0.6
GTF3C1-205ENST00000564747 ADARB2-AS1A8MUL3 147 aa11.32□□□□□ -0.6
GTF3C1-205ENST00000564747 SLC25A20O43772 301 aa11.32□□□□□ -0.6
GTF3C1-205ENST00000564747 H7C2G1 150 aa11.31□□□□□ -0.6
GTF3C1-205ENST00000564747 CD28P10747 220 aa11.31□□□□□ -0.6
GTF3C1-205ENST00000564747 TEX15Q9BXT5 2789 aa11.31□□□□□ -0.6
GTF3C1-205ENST00000564747 FAM208BQ5VWN6 2430 aa11.31□□□□□ -0.6
GTF3C1-205ENST00000564747 RBMY1BA6NDE4 496 aaKnown RBP11.31□□□□□ -0.6
GTF3C1-205ENST00000564747 RBMY1EA6NEQ0 496 aaKnown RBP11.31□□□□□ -0.6
GTF3C1-205ENST00000564747 C9JAW5 83 aa11.31□□□□□ -0.6
GTF3C1-205ENST00000564747 TMEM262E9PQX1 116 aa11.31□□□□□ -0.6
GTF3C1-205ENST00000564747 RBMY1DP0C7P1 496 aaKnown RBP11.31□□□□□ -0.6
GTF3C1-205ENST00000564747 Q6ZSN1 163 aa11.31□□□□□ -0.6
GTF3C1-205ENST00000564747 H3BMM0 161 aa11.3□□□□□ -0.6
GTF3C1-205ENST00000564747 IGHV3-33P01772 117 aa11.3□□□□□ -0.6
GTF3C1-205ENST00000564747 Q6YL49 198 aa11.3□□□□□ -0.6
GTF3C1-205ENST00000564747 TMEM263Q8WUH6 116 aaKnown RBP11.3□□□□□ -0.6
GTF3C1-205ENST00000564747 DUX3Q96PT4 197 aa11.3□□□□□ -0.6
GTF3C1-205ENST00000564747 TRAV8-3A0A0A6YYJ7 113 aa11.29□□□□□ -0.6
GTF3C1-205ENST00000564747 J3QLI3 93 aa11.29□□□□□ -0.6
GTF3C1-205ENST00000564747 IGHV3-30-3P0DP02 117 aa11.29□□□□□ -0.6
GTF3C1-205ENST00000564747 ERG28Q9UKR5 140 aa11.29□□□□□ -0.6
GTF3C1-205ENST00000564747 PYGO1Q9Y3Y4 419 aa11.29□□□□□ -0.6
GTF3C1-205ENST00000564747 TNFRSF18Q9Y5U5 241 aa11.29□□□□□ -0.6
GTF3C1-205ENST00000564747 NACAE9PAV3 2078 aa11.29□□□□□ -0.6
GTF3C1-205ENST00000564747 MYO9AB2RTY4 2548 aa11.29□□□□□ -0.6
GTF3C1-205ENST00000564747 A0A0J9YXY3 114 aa11.29□□□□□ -0.6
GTF3C1-205ENST00000564747 PRRC2AP48634 2157 aaKnown RBP11.29□□□□□ -0.6
GTF3C1-205ENST00000564747 M0R2P5 195 aa11.28□□□□□ -0.6
GTF3C1-205ENST00000564747 HIST2H2BDQ6DRA6 164 aa11.28□□□□□ -0.6
GTF3C1-205ENST00000564747 TIMM21Q9BVV7 248 aa11.28□□□□□ -0.6
GTF3C1-205ENST00000564747 A0A0B4J2C4 111 aa11.28□□□□□ -0.6
GTF3C1-205ENST00000564747 MRPS36P82909 103 aaKnown RBP11.28□□□□□ -0.6
GTF3C1-205ENST00000564747 EDA2RQ9HAV5 297 aa11.28□□□□□ -0.6
GTF3C1-205ENST00000564747 Q1RN00 199 aa11.27□□□□□ -0.61
GTF3C1-205ENST00000564747 ZFAND6Q6FIF0 208 aa11.27□□□□□ -0.61
GTF3C1-205ENST00000564747 TMEM61Q8N0U2 210 aa11.27□□□□□ -0.61
GTF3C1-205ENST00000564747 RNF183Q96D59 192 aa11.27□□□□□ -0.61
GTF3C1-205ENST00000564747 ZNF462Q96JM2 2506 aa11.27□□□□□ -0.61
GTF3C1-205ENST00000564747 TEX29Q8N6K0 151 aa11.27□□□□□ -0.61
GTF3C1-205ENST00000564747 ANAPC13Q9BS18 74 aa11.27□□□□□ -0.61
GTF3C1-205ENST00000564747 PTPN13Q12923 2485 aa11.26□□□□□ -0.61
GTF3C1-205ENST00000564747 LRRK2Q5S007 2527 aa11.26□□□□□ -0.61
GTF3C1-205ENST00000564747 A8MZ25 164 aa11.26□□□□□ -0.61
GTF3C1-205ENST00000564747 M0QXV9 152 aa11.26□□□□□ -0.61
GTF3C1-205ENST00000564747 CHCHD7Q9BUK0 85 aa11.26□□□□□ -0.61
GTF3C1-205ENST00000564747 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.25□□□□□ -0.61
GTF3C1-205ENST00000564747 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.25□□□□□ -0.61
GTF3C1-205ENST00000564747 IGKV2-29A2NJV5 120 aaPredicted RBP11.25□□□□□ -0.61
GTF3C1-205ENST00000564747 A8MTW9 85 aa11.25□□□□□ -0.61
GTF3C1-205ENST00000564747 FSHBP01225 129 aa11.25□□□□□ -0.61
GTF3C1-205ENST00000564747 LITAFQ99732 161 aa11.25□□□□□ -0.61
GTF3C1-205ENST00000564747 AKAP9Q99996 3911 aa11.25□□□□□ -0.61
GTF3C1-205ENST00000564747 IGHV3-38A0A0C4DH36 116 aa11.25□□□□□ -0.61
GTF3C1-205ENST00000564747 PRSS2P07478 247 aa11.25□□□□□ -0.61
GTF3C1-205ENST00000564747 ZNF469Q96JG9 3925 aaPredicted RBP11.25□□□□□ -0.61
GTF3C1-205ENST00000564747 ADAMTSL4-AS1Q5T5F5 129 aa11.24□□□□□ -0.61
GTF3C1-205ENST00000564747 ABCA12Q86UK0 2595 aa11.24□□□□□ -0.61
GTF3C1-205ENST00000564747 ATXN8Q156A1 80 aa11.24□□□□□ -0.61
GTF3C1-205ENST00000564747 LINC01587Q99440 93 aa11.24□□□□□ -0.61
GTF3C1-205ENST00000564747 UBE2D4Q9Y2X8 147 aa11.24□□□□□ -0.61
GTF3C1-205ENST00000564747 IGHV1-58A0A0C4DH39 117 aa11.23□□□□□ -0.61
GTF3C1-205ENST00000564747 IGHV4-31P0DP07 118 aa11.23□□□□□ -0.61
GTF3C1-205ENST00000564747 ZNF415Q09FC8 603 aa11.23□□□□□ -0.61
GTF3C1-205ENST00000564747 NTN5Q8WTR8 489 aaPredicted RBP11.23□□□□□ -0.61
GTF3C1-205ENST00000564747 CHD6Q8TD26 2715 aa11.23□□□□□ -0.61
GTF3C1-205ENST00000564747 NDUFA12Q9UI09 145 aa11.23□□□□□ -0.61
GTF3C1-205ENST00000564747 KHDC1LQ5JSQ8 128 aa11.22□□□□□ -0.61
GTF3C1-205ENST00000564747 LINC00467Q9BRT7 94 aa11.22□□□□□ -0.61
GTF3C1-205ENST00000564747 MAP6D1Q9H9H5 199 aa11.22□□□□□ -0.61
GTF3C1-205ENST00000564747 LINC01620Q4KN68 170 aa11.22□□□□□ -0.61
GTF3C1-205ENST00000564747 C11orf72Q8NBR9 251 aa11.22□□□□□ -0.61
GTF3C1-205ENST00000564747 CITED1Q99966 193 aa11.22□□□□□ -0.61
GTF3C1-205ENST00000564747 VSIG2Q96IQ7 327 aa11.22□□□□□ -0.61
GTF3C1-205ENST00000564747 NAV2Q8IVL1 2488 aa11.21□□□□□ -0.61
GTF3C1-205ENST00000564747 TINCRA0A1B0GVN0 87 aa11.21□□□□□ -0.61
GTF3C1-205ENST00000564747 SNCGO76070 127 aa11.21□□□□□ -0.61
GTF3C1-205ENST00000564747 NPC2P61916 151 aa11.21□□□□□ -0.61
GTF3C1-205ENST00000564747 TLN2Q9Y4G6 2542 aa11.21□□□□□ -0.61
GTF3C1-205ENST00000564747 SVIPQ8NHG7 77 aa11.21□□□□□ -0.62
GTF3C1-205ENST00000564747 PEMTQ9UBM1 199 aa11.21□□□□□ -0.62
GTF3C1-205ENST00000564747 CR1P17927 2039 aa11.2□□□□□ -0.62
GTF3C1-205ENST00000564747 SPANXA1Q9NS26 97 aa11.2□□□□□ -0.62
GTF3C1-205ENST00000564747 PIK3CD-AS1Q5SR53 167 aa11.2□□□□□ -0.62
GTF3C1-205ENST00000564747 DYNLRB2Q8TF09 96 aa11.2□□□□□ -0.62
GTF3C1-205ENST00000564747 IGHV3-53P01767 116 aa11.19□□□□□ -0.62
GTF3C1-205ENST00000564747 PRB1P04280 392 aa11.19□□□□□ -0.62
GTF3C1-205ENST00000564747 KRTAP10-9P60411 292 aa11.19□□□□□ -0.62
GTF3C1-205ENST00000564747 GAGE2BQ13066 116 aa11.19□□□□□ -0.62
GTF3C1-205ENST00000564747 GAGE2EQ4V326 116 aa11.19□□□□□ -0.62
GTF3C1-205ENST00000564747 Q6ZSV7 163 aa11.19□□□□□ -0.62
GTF3C1-205ENST00000564747 GAGE2DQ9UEU5 116 aa11.19□□□□□ -0.62
GTF3C1-205ENST00000564747 TRBV30A0A0K0K1B3 111 aa11.19□□□□□ -0.62
GTF3C1-205ENST00000564747 TRIAP1O43715 76 aa11.19□□□□□ -0.62
GTF3C1-205ENST00000564747 NF1P21359 2839 aa11.19□□□□□ -0.62
GTF3C1-205ENST00000564747 TEX49A0A1B0GTD5 131 aa11.18□□□□□ -0.62
GTF3C1-205ENST00000564747 DEFB114Q30KQ6 69 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms