RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 NIT2Q9NQR4 276 aa8.87□□□□□ -0.99
CDR2-204ENST00000564542 GAGE12HA6NDE8 117 aa8.86□□□□□ -0.99
CDR2-204ENST00000564542 F2Z2F3 143 aa8.86□□□□□ -0.99
CDR2-204ENST00000564542 NDUFS6O75380 124 aaKnown RBP8.86□□□□□ -0.99
CDR2-204ENST00000564542 H2AFB1P0C5Y9 115 aa8.86□□□□□ -0.99
CDR2-204ENST00000564542 TRGC1P0CF51 173 aa8.86□□□□□ -0.99
CDR2-204ENST00000564542 RPS10P46783 165 aaKnown RBP8.86□□□□□ -0.99
CDR2-204ENST00000564542 COTL1Q14019 142 aa8.86□□□□□ -0.99
CDR2-204ENST00000564542 CENPWQ5EE01 88 aa8.86□□□□□ -0.99
CDR2-204ENST00000564542 C19orf71A6NCJ1 209 aa8.85□□□□□ -0.99
CDR2-204ENST00000564542 MAJINQ3KP22 176 aa8.85□□□□□ -0.99
CDR2-204ENST00000564542 GTSF1Q8WW33 167 aa8.85□□□□□ -0.99
CDR2-204ENST00000564542 MANBALQ9NQG1 85 aa8.85□□□□□ -0.99
CDR2-204ENST00000564542 IGKV2-24A0A0C4DH68 120 aa8.84□□□□□ -0.99
CDR2-204ENST00000564542 XKRY2A2RUG3 117 aa8.84□□□□□ -0.99
CDR2-204ENST00000564542 SMLR1H3BR10 107 aa8.84□□□□□ -0.99
CDR2-204ENST00000564542 HIGD2BQ4VC39 106 aa8.84□□□□□ -0.99
CDR2-204ENST00000564542 PRSS3P2Q8NHM4 247 aa8.84□□□□□ -0.99
CDR2-204ENST00000564542 SMIM12Q96EX1 92 aa8.84□□□□□ -0.99
CDR2-204ENST00000564542 GVQW2A0A096LPI5 108 aaPredicted RBP8.83□□□□□ -1
CDR2-204ENST00000564542 IGKV3OR2-268A0A0C4DH90 116 aa8.83□□□□□ -1
CDR2-204ENST00000564542 LYZL1Q6UWQ5 148 aa8.83□□□□□ -1
CDR2-204ENST00000564542 STPG4Q8N801 248 aa8.83□□□□□ -1
CDR2-204ENST00000564542 GNG13Q9P2W3 67 aa8.83□□□□□ -1
CDR2-204ENST00000564542 A0A0J9YXV3 536 aa8.82□□□□□ -1
CDR2-204ENST00000564542 BCL2L11O43521 198 aa8.82□□□□□ -1
CDR2-204ENST00000564542 IFNA1P01562 189 aa8.82□□□□□ -1
CDR2-204ENST00000564542 NTF3P20783 257 aa8.82□□□□□ -1
CDR2-204ENST00000564542 CTRLP40313 264 aa8.82□□□□□ -1
CDR2-204ENST00000564542 GNG4P50150 75 aa8.82□□□□□ -1
CDR2-204ENST00000564542 CHCHD10Q8WYQ3 142 aaPredicted RBP8.82□□□□□ -1
CDR2-204ENST00000564542 BATF3Q9NR55 127 aa8.82□□□□□ -1
CDR2-204ENST00000564542 A0A096LNI7 61 aa8.81□□□□□ -1
CDR2-204ENST00000564542 KANTRA0A1W2PQU2 76 aa8.81□□□□□ -1
CDR2-204ENST00000564542 CCL20P78556 96 aa8.81□□□□□ -1
CDR2-204ENST00000564542 ODF1Q14990 250 aa8.81□□□□□ -1
CDR2-204ENST00000564542 AMMECR1LQ6DCA0 310 aa8.81□□□□□ -1
CDR2-204ENST00000564542 C9orf62Q8N4C0 152 aa8.81□□□□□ -1
CDR2-204ENST00000564542 RAB19A4D1S5 217 aa8.8□□□□□ -1
CDR2-204ENST00000564542 HMSDA8MTL9 139 aa8.8□□□□□ -1
CDR2-204ENST00000564542 EIF5AP63241 154 aaKnown RBP8.8□□□□□ -1
CDR2-204ENST00000564542 SPINK6Q6UWN8 80 aa8.8□□□□□ -1
CDR2-204ENST00000564542 LYPD6BQ8NI32 183 aa8.8□□□□□ -1
CDR2-204ENST00000564542 CNFNQ9BYD5 112 aa8.8□□□□□ -1
CDR2-204ENST00000564542 LINC00474Q9P2X8 69 aa8.8□□□□□ -1
CDR2-204ENST00000564542 PKIGQ9Y2B9 76 aa8.8□□□□□ -1
CDR2-204ENST00000564542 TRBV20OR9-2A0A075B6H5 130 aa8.79□□□□□ -1
CDR2-204ENST00000564542 TRAV1-1A0A0B4J248 108 aa8.79□□□□□ -1
CDR2-204ENST00000564542 H7C423 109 aa8.79□□□□□ -1
CDR2-204ENST00000564542 NCR2O95944 276 aa8.79□□□□□ -1
CDR2-204ENST00000564542 REG3GQ6UW15 175 aa8.79□□□□□ -1
CDR2-204ENST00000564542 Q6ZNX1 250 aa8.79□□□□□ -1
CDR2-204ENST00000564542 GATD1Q8NB37 220 aa8.79□□□□□ -1
CDR2-204ENST00000564542 BIN3Q9NQY0 253 aa8.79□□□□□ -1
CDR2-204ENST00000564542 TRAV26-2A0A0B4J265 109 aa8.78□□□□□ -1
CDR2-204ENST00000564542 PDE6DO43924 150 aa8.78□□□□□ -1
CDR2-204ENST00000564542 APCSP02743 223 aa8.78□□□□□ -1
CDR2-204ENST00000564542 KRTAP10-8P60410 259 aa8.78□□□□□ -1
CDR2-204ENST00000564542 MEF2BQ02080 365 aaPredicted RBP8.78□□□□□ -1
CDR2-204ENST00000564542 FOXI1Q12951 378 aa8.78□□□□□ -1
CDR2-204ENST00000564542 TWIST1Q15672 202 aa8.78□□□□□ -1
CDR2-204ENST00000564542 RGS21Q2M5E4 152 aa8.78□□□□□ -1
CDR2-204ENST00000564542 RNASEKQ6P5S7 137 aaKnown RBP8.78□□□□□ -1
CDR2-204ENST00000564542 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.77□□□□□ -1.01
CDR2-204ENST00000564542 IGKV2-29A2NJV5 120 aaPredicted RBP8.77□□□□□ -1.01
CDR2-204ENST00000564542 FGF6P10767 208 aa8.77□□□□□ -1.01
CDR2-204ENST00000564542 ZNF25P17030 456 aaPredicted RBP8.77□□□□□ -1.01
CDR2-204ENST00000564542 TEX46H3BTG2 121 aa8.76□□□□□ -1.01
CDR2-204ENST00000564542 NUDT10Q8NFP7 164 aa8.76□□□□□ -1.01
CDR2-204ENST00000564542 OR5A1Q8NGJ0 315 aa8.76□□□□□ -1.01
CDR2-204ENST00000564542 RPL39LQ96EH5 51 aaKnown RBP8.76□□□□□ -1.01
CDR2-204ENST00000564542 NUDT11Q96G61 164 aa8.76□□□□□ -1.01
CDR2-204ENST00000564542 XCL1P47992 114 aa8.75□□□□□ -1.01
CDR2-204ENST00000564542 SRSF9Q13242 221 aaKnown RBP eCLIP8.75□□□□□ -1.01
CDR2-204ENST00000564542 Q6ZRP5 223 aa8.75□□□□□ -1.01
CDR2-204ENST00000564542 CARD19Q96LW7 228 aa8.75□□□□□ -1.01
CDR2-204ENST00000564542 RPP21Q9H633 154 aaKnown RBP8.75□□□□□ -1.01
CDR2-204ENST00000564542 MED9Q9NWA0 146 aa8.75□□□□□ -1.01
CDR2-204ENST00000564542 IGHV1-58A0A0C4DH39 117 aa8.74□□□□□ -1.01
CDR2-204ENST00000564542 SDHAF1A6NFY7 115 aa8.74□□□□□ -1.01
CDR2-204ENST00000564542 TEX261Q6UWH6 196 aa8.74□□□□□ -1.01
CDR2-204ENST00000564542 LINC00959A0A1B0GUT2 108 aa8.73□□□□□ -1.01
CDR2-204ENST00000564542 CCL25O15444 150 aa8.73□□□□□ -1.01
CDR2-204ENST00000564542 BCL2P10415 239 aa8.73□□□□□ -1.01
CDR2-204ENST00000564542 SMIM15Q7Z3B0 74 aa8.73□□□□□ -1.01
CDR2-204ENST00000564542 LINC00526Q96FQ7 95 aa8.73□□□□□ -1.01
CDR2-204ENST00000564542 TMEM101Q96IK0 257 aa8.73□□□□□ -1.01
CDR2-204ENST00000564542 BTF3L4Q96K17 158 aa8.73□□□□□ -1.01
CDR2-204ENST00000564542 I3L3M4 83 aa8.72□□□□□ -1.01
CDR2-204ENST00000564542 EIF5AL1Q6IS14 154 aaKnown RBP8.72□□□□□ -1.01
CDR2-204ENST00000564542 RNASE7Q9H1E1 156 aaKnown RBP8.72□□□□□ -1.01
CDR2-204ENST00000564542 FAM231BA6NCW3 169 aa8.71□□□□□ -1.02
CDR2-204ENST00000564542 K7EN84 100 aa8.71□□□□□ -1.02
CDR2-204ENST00000564542 FOXA3P55318 350 aaPredicted RBP8.71□□□□□ -1.02
CDR2-204ENST00000564542 SYCNQ0VAF6 134 aa8.71□□□□□ -1.02
CDR2-204ENST00000564542 TRBV6-5A0A0K0K1A5 114 aa8.7□□□□□ -1.02
CDR2-204ENST00000564542 ZNF561-AS1K7EIQ3 104 aa8.7□□□□□ -1.02
CDR2-204ENST00000564542 ESDP10768 282 aa8.7□□□□□ -1.02
CDR2-204ENST00000564542 PMCHP20382 165 aa8.7□□□□□ -1.02
CDR2-204ENST00000564542 PTTG1IPP53801 180 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 182.7 ms