RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 TMEM70Q9BUB7 260 aa11.52□□□□□ -0.57
USB1-209ENST00000564387 TM2D2Q9BX73 214 aa11.52□□□□□ -0.57
USB1-209ENST00000564387 PRR34Q9NV39 138 aa11.52□□□□□ -0.57
USB1-209ENST00000564387 TRBV27A0A0K0K1C4 114 aa11.51□□□□□ -0.57
USB1-209ENST00000564387 F8W036 122 aa11.51□□□□□ -0.57
USB1-209ENST00000564387 PPP1R17O96001 155 aa11.51□□□□□ -0.57
USB1-209ENST00000564387 Q0VG73 95 aa11.51□□□□□ -0.57
USB1-209ENST00000564387 MRPL51Q4U2R6 128 aaKnown RBP11.51□□□□□ -0.57
USB1-209ENST00000564387 ENHOQ6UWT2 76 aa11.51□□□□□ -0.57
USB1-209ENST00000564387 SPATA12Q7Z6I5 190 aa11.51□□□□□ -0.57
USB1-209ENST00000564387 Q8N976 141 aa11.51□□□□□ -0.57
USB1-209ENST00000564387 ST20Q9HBF5 79 aa11.51□□□□□ -0.57
USB1-209ENST00000564387 COX11Q9Y6N1 276 aa11.51□□□□□ -0.57
USB1-209ENST00000564387 I3L3M4 83 aa11.5□□□□□ -0.57
USB1-209ENST00000564387 GAGE6Q13070 117 aa11.5□□□□□ -0.57
USB1-209ENST00000564387 MRPL54Q6P161 138 aaKnown RBP11.5□□□□□ -0.57
USB1-209ENST00000564387 MAPKAPK5-AS1Q8N8E1 139 aa11.5□□□□□ -0.57
USB1-209ENST00000564387 IMMP2LQ96T52 175 aa11.5□□□□□ -0.57
USB1-209ENST00000564387 TRBV24-1A0A075B6N3 115 aa11.49□□□□□ -0.57
USB1-209ENST00000564387 AMTP48728 403 aa11.49□□□□□ -0.57
USB1-209ENST00000564387 UBE2WQ96B02 151 aa11.49□□□□□ -0.57
USB1-209ENST00000564387 RMI2Q96E14 147 aa11.49□□□□□ -0.57
USB1-209ENST00000564387 PGPEP1Q9NXJ5 209 aa11.49□□□□□ -0.57
USB1-209ENST00000564387 KIAA1109Q2LD37 5005 aa11.49□□□□□ -0.57
USB1-209ENST00000564387 SMKR1H3BMG3 65 aa11.48□□□□□ -0.57
USB1-209ENST00000564387 H7C423 109 aa11.48□□□□□ -0.57
USB1-209ENST00000564387 EREGO14944 169 aa11.48□□□□□ -0.57
USB1-209ENST00000564387 PSCAO43653 123 aa11.48□□□□□ -0.57
USB1-209ENST00000564387 ANGP03950 147 aaKnown RBP11.48□□□□□ -0.57
USB1-209ENST00000564387 C20orf203Q8NBC4 194 aa11.48□□□□□ -0.57
USB1-209ENST00000564387 DEFB104AQ8WTQ1 72 aa11.48□□□□□ -0.57
USB1-209ENST00000564387 CTDSP1Q9GZU7 261 aa11.48□□□□□ -0.57
USB1-209ENST00000564387 CARHSP1Q9Y2V2 147 aaKnown RBP11.48□□□□□ -0.57
USB1-209ENST00000564387 TSHBP01222 138 aa11.47□□□□□ -0.57
USB1-209ENST00000564387 ESDP10768 282 aa11.47□□□□□ -0.57
USB1-209ENST00000564387 RPL32P62910 135 aaKnown RBP11.47□□□□□ -0.57
USB1-209ENST00000564387 CDPF1Q6NVV7 123 aa11.47□□□□□ -0.57
USB1-209ENST00000564387 DNAH5Q8TE73 4624 aa11.46□□□□□ -0.57
USB1-209ENST00000564387 IGLV4-60A0A075B6I1 120 aa11.46□□□□□ -0.57
USB1-209ENST00000564387 C16orf90A8MZG2 172 aa11.46□□□□□ -0.57
USB1-209ENST00000564387 PMCHP20382 165 aa11.46□□□□□ -0.57
USB1-209ENST00000564387 SUMO2P61956 95 aaKnown RBP11.46□□□□□ -0.57
USB1-209ENST00000564387 MIAQ16674 131 aa11.46□□□□□ -0.57
USB1-209ENST00000564387 C20orf78Q9BR46 151 aa11.46□□□□□ -0.57
USB1-209ENST00000564387 TMEM242Q9NWH2 141 aa11.46□□□□□ -0.57
USB1-209ENST00000564387 LRP1BQ9NZR2 4599 aa11.46□□□□□ -0.57
USB1-209ENST00000564387 VCYO14598 125 aa11.45□□□□□ -0.58
USB1-209ENST00000564387 APCSP02743 223 aa11.45□□□□□ -0.58
USB1-209ENST00000564387 PPBPP02775 128 aa11.45□□□□□ -0.58
USB1-209ENST00000564387 KRTAP26-1Q6PEX3 210 aa11.45□□□□□ -0.58
USB1-209ENST00000564387 LINC00269Q8N2A0 174 aa11.45□□□□□ -0.58
USB1-209ENST00000564387 BTF3L4Q96K17 158 aa11.45□□□□□ -0.58
USB1-209ENST00000564387 IGKV2D-24A0A075B6R9 120 aa11.44□□□□□ -0.58
USB1-209ENST00000564387 PHOX2AO14813 284 aa11.44□□□□□ -0.58
USB1-209ENST00000564387 CKS2P33552 79 aa11.44□□□□□ -0.58
USB1-209ENST00000564387 TRAV9-1A0A075B6T8 112 aa11.43□□□□□ -0.58
USB1-209ENST00000564387 UBE2L6O14933 153 aa11.43□□□□□ -0.58
USB1-209ENST00000564387 TNFRSF6BO95407 300 aa11.43□□□□□ -0.58
USB1-209ENST00000564387 CRPP02741 224 aa11.43□□□□□ -0.58
USB1-209ENST00000564387 WFDC2Q14508 124 aa11.43□□□□□ -0.58
USB1-209ENST00000564387 Q8N814 137 aa11.43□□□□□ -0.58
USB1-209ENST00000564387 HERC2O95714 4834 aa11.43□□□□□ -0.58
USB1-209ENST00000564387 D6R8Y8 96 aa11.42□□□□□ -0.58
USB1-209ENST00000564387 REG3AQ06141 175 aa11.42□□□□□ -0.58
USB1-209ENST00000564387 NTN5Q8WTR8 489 aaPredicted RBP11.42□□□□□ -0.58
USB1-209ENST00000564387 C1orf43Q9BWL3 253 aa11.42□□□□□ -0.58
USB1-209ENST00000564387 TRAV8-4A0A0B4J246 113 aa11.41□□□□□ -0.58
USB1-209ENST00000564387 C7orf77A4D0Y5 90 aa11.41□□□□□ -0.58
USB1-209ENST00000564387 PRSS47A8MTI9 375 aa11.41□□□□□ -0.58
USB1-209ENST00000564387 ZNF25P17030 456 aaPredicted RBP11.41□□□□□ -0.58
USB1-209ENST00000564387 MRPL52Q86TS9 123 aaKnown RBP11.41□□□□□ -0.58
USB1-209ENST00000564387 CLRN3Q8NCR9 226 aa11.41□□□□□ -0.58
USB1-209ENST00000564387 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.4□□□□□ -0.58
USB1-209ENST00000564387 IGKV2-29A2NJV5 120 aaPredicted RBP11.4□□□□□ -0.58
USB1-209ENST00000564387 NPYP01303 97 aa11.4□□□□□ -0.58
USB1-209ENST00000564387 FGF6P10767 208 aa11.4□□□□□ -0.58
USB1-209ENST00000564387 RHEBQ15382 184 aa11.4□□□□□ -0.58
USB1-209ENST00000564387 ORMDL3Q8N138 153 aa11.4□□□□□ -0.58
USB1-209ENST00000564387 BAALCQ8WXS3 180 aa11.4□□□□□ -0.58
USB1-209ENST00000564387 CDK2AP2O75956 126 aa11.39□□□□□ -0.59
USB1-209ENST00000564387 TMEM136Q6ZRR5 245 aa11.39□□□□□ -0.59
USB1-209ENST00000564387 KIR2DL4Q99706 377 aa11.39□□□□□ -0.59
USB1-209ENST00000564387 LAMTOR2Q9Y2Q5 125 aa11.39□□□□□ -0.59
USB1-209ENST00000564387 TCAPO15273 167 aa11.38□□□□□ -0.59
USB1-209ENST00000564387 FUSP35637 526 aaKnown RBP eCLIP11.38□□□□□ -0.59
USB1-209ENST00000564387 CLPSL2Q6UWE3 100 aa11.38□□□□□ -0.59
USB1-209ENST00000564387 SMIM2Q9BVW6 85 aa11.38□□□□□ -0.59
USB1-209ENST00000564387 CSDC2Q9Y534 153 aaKnown RBP11.38□□□□□ -0.59
USB1-209ENST00000564387 RYR1P21817 5038 aa11.38□□□□□ -0.59
USB1-209ENST00000564387 AMMECR1LQ6DCA0 310 aa11.37□□□□□ -0.59
USB1-209ENST00000564387 PRELID3AQ96N28 172 aa11.37□□□□□ -0.59
USB1-209ENST00000564387 LECT2O14960 151 aa11.36□□□□□ -0.59
USB1-209ENST00000564387 FCER1GP30273 86 aa11.36□□□□□ -0.59
USB1-209ENST00000564387 APOBP04114 4563 aaKnown RBP11.35□□□□□ -0.59
USB1-209ENST00000564387 RNASEKQ6P5S7 137 aaKnown RBP11.35□□□□□ -0.59
USB1-209ENST00000564387 TIMM21Q9BVV7 248 aa11.35□□□□□ -0.59
USB1-209ENST00000564387 CDC42SE2Q9NRR3 84 aa11.35□□□□□ -0.59
USB1-209ENST00000564387 IGLV5-52A0A0A0MRZ9 124 aa11.34□□□□□ -0.59
USB1-209ENST00000564387 GCSHP23434 173 aa11.34□□□□□ -0.59
USB1-209ENST00000564387 S100PP25815 95 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms