RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 F2Z2F3 143 aa3.63□□□□□ -1.83
HERPUD1-207ENST00000563781 ATP5G1P05496 136 aa3.63□□□□□ -1.83
HERPUD1-207ENST00000563781 CRYGDP07320 174 aa3.63□□□□□ -1.83
HERPUD1-207ENST00000563781 LINC00315P59091 139 aa3.63□□□□□ -1.83
HERPUD1-207ENST00000563781 CACNG7P62955 275 aa3.63□□□□□ -1.83
HERPUD1-207ENST00000563781 RHEBQ15382 184 aa3.63□□□□□ -1.83
HERPUD1-207ENST00000563781 COX19Q49B96 90 aa3.63□□□□□ -1.83
HERPUD1-207ENST00000563781 SPANXN1Q5VSR9 72 aa3.63□□□□□ -1.83
HERPUD1-207ENST00000563781 MAP1LC3CQ9BXW4 147 aa3.63□□□□□ -1.83
HERPUD1-207ENST00000563781 KIF25-AS1Q9Y6Z4 181 aa3.63□□□□□ -1.83
HERPUD1-207ENST00000563781 MUC4Q99102 2169 aa3.63□□□□□ -1.83
HERPUD1-207ENST00000563781 DNAH10Q8IVF4 4471 aa3.62□□□□□ -1.83
HERPUD1-207ENST00000563781 IGLV5-45A0A087WSX0 123 aa3.62□□□□□ -1.83
HERPUD1-207ENST00000563781 DEFB131BA0A096LNP1 70 aa3.62□□□□□ -1.83
HERPUD1-207ENST00000563781 IGHV3-73A0A0B4J1V6 119 aa3.62□□□□□ -1.83
HERPUD1-207ENST00000563781 A0A1B0GUT8 65 aa3.62□□□□□ -1.83
HERPUD1-207ENST00000563781 A8MWV9 139 aa3.62□□□□□ -1.83
HERPUD1-207ENST00000563781 HTN3P15516 51 aa3.62□□□□□ -1.83
HERPUD1-207ENST00000563781 GATA1P15976 413 aaPredicted RBP3.62□□□□□ -1.83
HERPUD1-207ENST00000563781 NTF3P20783 257 aa3.62□□□□□ -1.83
HERPUD1-207ENST00000563781 TWIST1Q15672 202 aa3.62□□□□□ -1.83
HERPUD1-207ENST00000563781 ZFAND6Q6FIF0 208 aa3.62□□□□□ -1.83
HERPUD1-207ENST00000563781 CEMP1Q6PRD7 247 aaPredicted RBP3.62□□□□□ -1.83
HERPUD1-207ENST00000563781 ZFP2Q6ZN57 461 aa3.62□□□□□ -1.83
HERPUD1-207ENST00000563781 SVBPQ8N300 66 aa3.62□□□□□ -1.83
HERPUD1-207ENST00000563781 C14orf178Q8N769 122 aaPredicted RBP3.62□□□□□ -1.83
HERPUD1-207ENST00000563781 NRACQ8N912 160 aa3.62□□□□□ -1.83
HERPUD1-207ENST00000563781 MUC7Q8TAX7 377 aa3.62□□□□□ -1.83
HERPUD1-207ENST00000563781 VSIG2Q96IQ7 327 aa3.62□□□□□ -1.83
HERPUD1-207ENST00000563781 AP1S3Q96PC3 154 aa3.62□□□□□ -1.83
HERPUD1-207ENST00000563781 TMEM242Q9NWH2 141 aa3.62□□□□□ -1.83
HERPUD1-207ENST00000563781 NAT8BQ9UHF3 227 aa3.62□□□□□ -1.83
HERPUD1-207ENST00000563781 LOC100131303A0A0U1RQF7 123 aa3.61□□□□□ -1.83
HERPUD1-207ENST00000563781 F5H768 121 aa3.61□□□□□ -1.83
HERPUD1-207ENST00000563781 TRGC1P0CF51 173 aa3.61□□□□□ -1.83
HERPUD1-207ENST00000563781 EVI2AP22794 236 aa3.61□□□□□ -1.83
HERPUD1-207ENST00000563781 CRYBA4P53673 196 aa3.61□□□□□ -1.83
HERPUD1-207ENST00000563781 MRPL54Q6P161 138 aaKnown RBP3.61□□□□□ -1.83
HERPUD1-207ENST00000563781 GATD1Q8NB37 220 aa3.61□□□□□ -1.83
HERPUD1-207ENST00000563781 YPEL4Q96NS1 127 aa3.61□□□□□ -1.83
HERPUD1-207ENST00000563781 IMMP2LQ96T52 175 aa3.61□□□□□ -1.83
HERPUD1-207ENST00000563781 RPS10P5Q9NQ39 176 aa3.61□□□□□ -1.83
HERPUD1-207ENST00000563781 Q9UF83 564 aa3.61□□□□□ -1.83
HERPUD1-207ENST00000563781 DNAH17Q9UFH2 4485 aa3.61□□□□□ -1.83
HERPUD1-207ENST00000563781 TRGV4A0A0C4DH28 118 aa3.6□□□□□ -1.83
HERPUD1-207ENST00000563781 A0A0J9YY99 117 aa3.6□□□□□ -1.83
HERPUD1-207ENST00000563781 TRBV6-4A0A1B0GX49 114 aa3.6□□□□□ -1.83
HERPUD1-207ENST00000563781 NUPR2A6NF83 97 aa3.6□□□□□ -1.83
HERPUD1-207ENST00000563781 P0DMU3 169 aa3.6□□□□□ -1.83
HERPUD1-207ENST00000563781 FAM231AP0DMU4 169 aa3.6□□□□□ -1.83
HERPUD1-207ENST00000563781 FAM231CP0DMU5 169 aa3.6□□□□□ -1.83
HERPUD1-207ENST00000563781 LINC00694P0DN24 101 aa3.6□□□□□ -1.83
HERPUD1-207ENST00000563781 RPL13AP40429 203 aaKnown RBP3.6□□□□□ -1.83
HERPUD1-207ENST00000563781 HBBP68871 147 aa3.6□□□□□ -1.83
HERPUD1-207ENST00000563781 FAM74A4Q5TZK3 123 aa3.6□□□□□ -1.83
HERPUD1-207ENST00000563781 ATP5L2Q7Z4Y8 100 aa3.6□□□□□ -1.83
HERPUD1-207ENST00000563781 CBLN2Q8IUK8 224 aa3.6□□□□□ -1.83
HERPUD1-207ENST00000563781 SLC25A29Q8N8R3 303 aa3.6□□□□□ -1.83
HERPUD1-207ENST00000563781 BORCS7Q96B45 105 aa3.6□□□□□ -1.83
HERPUD1-207ENST00000563781 RNF185Q96GF1 192 aa3.6□□□□□ -1.83
HERPUD1-207ENST00000563781 BTF3L4Q96K17 158 aa3.6□□□□□ -1.83
HERPUD1-207ENST00000563781 FAM210BQ96KR6 192 aa3.6□□□□□ -1.83
HERPUD1-207ENST00000563781 TMEM191AQ9H0A3 160 aa3.6□□□□□ -1.83
HERPUD1-207ENST00000563781 DPH3P1Q9H4G8 78 aa3.6□□□□□ -1.83
HERPUD1-207ENST00000563781 Q9HAA7 133 aa3.6□□□□□ -1.83
HERPUD1-207ENST00000563781 PRO0255Q9UI72 69 aa3.6□□□□□ -1.83
HERPUD1-207ENST00000563781 HHLA3Q9XRX5 114 aa3.6□□□□□ -1.83
HERPUD1-207ENST00000563781 KMT2AQ03164 3969 aa3.6□□□□□ -1.83
HERPUD1-207ENST00000563781 DNAH11Q96DT5 4516 aa3.59□□□□□ -1.83
HERPUD1-207ENST00000563781 TRAV9-1A0A075B6T8 112 aa3.59□□□□□ -1.83
HERPUD1-207ENST00000563781 A0A096LPF7 62 aa3.59□□□□□ -1.83
HERPUD1-207ENST00000563781 TGIF2-C20orf24A0A0A6YYL0 155 aa3.59□□□□□ -1.83
HERPUD1-207ENST00000563781 IGLL5B9A064 214 aa3.59□□□□□ -1.83
HERPUD1-207ENST00000563781 H3BNG1 76 aa3.59□□□□□ -1.83
HERPUD1-207ENST00000563781 C3orf84H3BNL1 204 aa3.59□□□□□ -1.83
HERPUD1-207ENST00000563781 K7EQD1 137 aa3.59□□□□□ -1.83
HERPUD1-207ENST00000563781 M0QY20 66 aa3.59□□□□□ -1.83
HERPUD1-207ENST00000563781 MGPP08493 103 aa3.59□□□□□ -1.83
HERPUD1-207ENST00000563781 ELOBQ15370 118 aa3.59□□□□□ -1.83
HERPUD1-207ENST00000563781 RHOHQ15669 191 aa3.59□□□□□ -1.83
HERPUD1-207ENST00000563781 ZNF56Q15929 161 aa3.59□□□□□ -1.83
HERPUD1-207ENST00000563781 CASC10Q5T4H9 136 aa3.59□□□□□ -1.83
HERPUD1-207ENST00000563781 TMEM136Q6ZRR5 245 aa3.59□□□□□ -1.83
HERPUD1-207ENST00000563781 AMN1Q8IY45 258 aa3.59□□□□□ -1.83
HERPUD1-207ENST00000563781 APLNQ9ULZ1 77 aa3.59□□□□□ -1.83
HERPUD1-207ENST00000563781 PCLOQ9Y6V0 5065 aa3.58□□□□□ -1.84
HERPUD1-207ENST00000563781 NACAE9PAV3 2078 aa3.58□□□□□ -1.84
HERPUD1-207ENST00000563781 TRBV24-1A0A075B6N3 115 aa3.58□□□□□ -1.84
HERPUD1-207ENST00000563781 TRAV26-2A0A0B4J265 109 aa3.58□□□□□ -1.84
HERPUD1-207ENST00000563781 SMKR1H3BMG3 65 aa3.58□□□□□ -1.84
HERPUD1-207ENST00000563781 HSBP1O75506 76 aa3.58□□□□□ -1.84
HERPUD1-207ENST00000563781 SCO1O75880 301 aa3.58□□□□□ -1.84
HERPUD1-207ENST00000563781 GAS8-AS1O95177 125 aa3.58□□□□□ -1.84
HERPUD1-207ENST00000563781 NCR2O95944 276 aa3.58□□□□□ -1.84
HERPUD1-207ENST00000563781 S100A8P05109 93 aa3.58□□□□□ -1.84
HERPUD1-207ENST00000563781 SMIM17P0DL12 118 aa3.58□□□□□ -1.84
HERPUD1-207ENST00000563781 S100PP25815 95 aa3.58□□□□□ -1.84
HERPUD1-207ENST00000563781 MRPL51Q4U2R6 128 aaKnown RBP3.58□□□□□ -1.84
HERPUD1-207ENST00000563781 FAM104BQ5XKR9 115 aa3.58□□□□□ -1.84
HERPUD1-207ENST00000563781 RASL11AQ6T310 242 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms