RNA–Protein interactions for RNA: ENST00000563492.1

CDH11-208, Transcript of cadherin 11, humanhuman

TSL 5

Gene CDH11, Length 468 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-208ENST00000563492 IFNA1P01562 189 aa4.39□□□□□ -1.71
CDH11-208ENST00000563492 GNG4P50150 75 aa4.39□□□□□ -1.71
CDH11-208ENST00000563492 TMEM97Q5BJF2 176 aa4.39□□□□□ -1.71
CDH11-208ENST00000563492 SERTAD4-AS1Q5TG53 156 aa4.39□□□□□ -1.71
CDH11-208ENST00000563492 RASL11AQ6T310 242 aa4.39□□□□□ -1.71
CDH11-208ENST00000563492 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.39□□□□□ -1.71
CDH11-208ENST00000563492 NUDT10Q8NFP7 164 aa4.39□□□□□ -1.71
CDH11-208ENST00000563492 NUDT11Q96G61 164 aa4.39□□□□□ -1.71
CDH11-208ENST00000563492 TMEM243Q9BU79 118 aa4.39□□□□□ -1.71
CDH11-208ENST00000563492 MED9Q9NWA0 146 aa4.39□□□□□ -1.71
CDH11-208ENST00000563492 PKHD1L1Q86WI1 4243 aa4.38□□□□□ -1.71
CDH11-208ENST00000563492 A0A087WYN8 130 aa4.38□□□□□ -1.71
CDH11-208ENST00000563492 GAGE12HA6NDE8 117 aa4.38□□□□□ -1.71
CDH11-208ENST00000563492 K7EN84 100 aa4.38□□□□□ -1.71
CDH11-208ENST00000563492 GAS8-AS1O95177 125 aa4.38□□□□□ -1.71
CDH11-208ENST00000563492 P01737 135 aa4.38□□□□□ -1.71
CDH11-208ENST00000563492 RPS20P60866 119 aaKnown RBP4.38□□□□□ -1.71
CDH11-208ENST00000563492 PKIAP61925 76 aa4.38□□□□□ -1.71
CDH11-208ENST00000563492 CNBPP62633 177 aaKnown RBP4.38□□□□□ -1.71
CDH11-208ENST00000563492 CACNG7P62955 275 aa4.38□□□□□ -1.71
CDH11-208ENST00000563492 MEF2BQ02080 365 aaPredicted RBP4.38□□□□□ -1.71
CDH11-208ENST00000563492 CIRBPQ14011 172 aaKnown RBP4.38□□□□□ -1.71
CDH11-208ENST00000563492 COTL1Q14019 142 aa4.38□□□□□ -1.71
CDH11-208ENST00000563492 C9orf62Q8N4C0 152 aa4.38□□□□□ -1.71
CDH11-208ENST00000563492 C15orf56Q8N910 161 aa4.38□□□□□ -1.71
CDH11-208ENST00000563492 GATD1Q8NB37 220 aa4.38□□□□□ -1.71
CDH11-208ENST00000563492 RPL39LQ96EH5 51 aaKnown RBP4.38□□□□□ -1.71
CDH11-208ENST00000563492 DPH3Q96FX2 82 aa4.38□□□□□ -1.71
CDH11-208ENST00000563492 RNASE7Q9H1E1 156 aaKnown RBP4.38□□□□□ -1.71
CDH11-208ENST00000563492 MANBALQ9NQG1 85 aa4.38□□□□□ -1.71
CDH11-208ENST00000563492 NIT2Q9NQR4 276 aa4.38□□□□□ -1.71
CDH11-208ENST00000563492 PLA2G2DQ9UNK4 145 aa4.38□□□□□ -1.71
CDH11-208ENST00000563492 CBY1Q9Y3M2 126 aa4.38□□□□□ -1.71
CDH11-208ENST00000563492 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.37□□□□□ -1.71
CDH11-208ENST00000563492 A0A1B0GUV1 79 aa4.37□□□□□ -1.71
CDH11-208ENST00000563492 IGKV2-29A2NJV5 120 aaPredicted RBP4.37□□□□□ -1.71
CDH11-208ENST00000563492 F2Z2F3 143 aa4.37□□□□□ -1.71
CDH11-208ENST00000563492 H7C1H1 209 aa4.37□□□□□ -1.71
CDH11-208ENST00000563492 AMTP48728 403 aa4.37□□□□□ -1.71
CDH11-208ENST00000563492 SULT1A2P50226 295 aa4.37□□□□□ -1.71
CDH11-208ENST00000563492 EIF5AP63241 154 aaKnown RBP4.37□□□□□ -1.71
CDH11-208ENST00000563492 TWIST1Q15672 202 aa4.37□□□□□ -1.71
CDH11-208ENST00000563492 HIGD2BQ4VC39 106 aa4.37□□□□□ -1.71
CDH11-208ENST00000563492 Q6ZNX1 250 aa4.37□□□□□ -1.71
CDH11-208ENST00000563492 CLRN3Q8NCR9 226 aa4.37□□□□□ -1.71
CDH11-208ENST00000563492 PRSS3P2Q8NHM4 247 aa4.37□□□□□ -1.71
CDH11-208ENST00000563492 OCC1Q8TAD7 63 aa4.37□□□□□ -1.71
CDH11-208ENST00000563492 GTSF1Q8WW33 167 aa4.37□□□□□ -1.71
CDH11-208ENST00000563492 DPH3P1Q9H4G8 78 aa4.37□□□□□ -1.71
CDH11-208ENST00000563492 IGHV3-64A0A075B6Q5 118 aa4.36□□□□□ -1.71
CDH11-208ENST00000563492 TRAV8-4A0A0B4J246 113 aa4.36□□□□□ -1.71
CDH11-208ENST00000563492 PDE6DO43924 150 aa4.36□□□□□ -1.71
CDH11-208ENST00000563492 TRGC1P0CF51 173 aa4.36□□□□□ -1.71
CDH11-208ENST00000563492 BCL2P10415 239 aa4.36□□□□□ -1.71
CDH11-208ENST00000563492 CTRLP40313 264 aa4.36□□□□□ -1.71
CDH11-208ENST00000563492 COX6A2Q02221 97 aa4.36□□□□□ -1.71
CDH11-208ENST00000563492 SPACA4Q8TDM5 124 aa4.36□□□□□ -1.71
CDH11-208ENST00000563492 LINC00526Q96FQ7 95 aa4.36□□□□□ -1.71
CDH11-208ENST00000563492 PGLYRP4Q96LB8 373 aa4.36□□□□□ -1.71
CDH11-208ENST00000563492 IGKV2-24A0A0C4DH68 120 aa4.35□□□□□ -1.71
CDH11-208ENST00000563492 XKRY2A2RUG3 117 aa4.35□□□□□ -1.71
CDH11-208ENST00000563492 FAM231BA6NCW3 169 aa4.35□□□□□ -1.71
CDH11-208ENST00000563492 HSBP1L1C9JCN9 74 aa4.35□□□□□ -1.71
CDH11-208ENST00000563492 PHOX2AO14813 284 aa4.35□□□□□ -1.71
CDH11-208ENST00000563492 UBE2L6O14933 153 aa4.35□□□□□ -1.71
CDH11-208ENST00000563492 CHCHD10Q8WYQ3 142 aaPredicted RBP4.35□□□□□ -1.71
CDH11-208ENST00000563492 SMIM12Q96EX1 92 aa4.35□□□□□ -1.71
CDH11-208ENST00000563492 RPP21Q9H633 154 aaKnown RBP4.35□□□□□ -1.71
CDH11-208ENST00000563492 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.34□□□□□ -1.71
CDH11-208ENST00000563492 FGF6P10767 208 aa4.34□□□□□ -1.71
CDH11-208ENST00000563492 FOXI1Q12951 378 aa4.34□□□□□ -1.71
CDH11-208ENST00000563492 RNASEKQ6P5S7 137 aaKnown RBP4.34□□□□□ -1.71
CDH11-208ENST00000563492 LYPD6BQ8NI32 183 aa4.34□□□□□ -1.71
CDH11-208ENST00000563492 CNFNQ9BYD5 112 aa4.34□□□□□ -1.71
CDH11-208ENST00000563492 AP5S1Q9NUS5 200 aa4.34□□□□□ -1.71
CDH11-208ENST00000563492 PLAC8Q9NZF1 115 aa4.34□□□□□ -1.71
CDH11-208ENST00000563492 A0A096LNI7 61 aa4.33□□□□□ -1.72
CDH11-208ENST00000563492 SDHAF1A6NFY7 115 aa4.33□□□□□ -1.72
CDH11-208ENST00000563492 TEX46H3BTG2 121 aa4.33□□□□□ -1.72
CDH11-208ENST00000563492 S100A1P23297 94 aa4.33□□□□□ -1.72
CDH11-208ENST00000563492 RPS10P46783 165 aaKnown RBP4.33□□□□□ -1.72
CDH11-208ENST00000563492 XCL1P47992 114 aa4.33□□□□□ -1.72
CDH11-208ENST00000563492 AMMECR1LQ6DCA0 310 aa4.33□□□□□ -1.72
CDH11-208ENST00000563492 EIF5AL1Q6IS14 154 aaKnown RBP4.33□□□□□ -1.72
CDH11-208ENST00000563492 Q6ZRU5 148 aa4.33□□□□□ -1.72
CDH11-208ENST00000563492 LRP2P98164 4655 aa4.33□□□□□ -1.72
CDH11-208ENST00000563492 GVQW2A0A096LPI5 108 aaPredicted RBP4.32□□□□□ -1.72
CDH11-208ENST00000563492 GATCO43716 136 aaKnown RBP4.32□□□□□ -1.72
CDH11-208ENST00000563492 NDUFS6O75380 124 aaKnown RBP4.32□□□□□ -1.72
CDH11-208ENST00000563492 TSHBP01222 138 aa4.32□□□□□ -1.72
CDH11-208ENST00000563492 APCSP02743 223 aa4.32□□□□□ -1.72
CDH11-208ENST00000563492 PMCHP20382 165 aa4.32□□□□□ -1.72
CDH11-208ENST00000563492 PCP4P48539 62 aa4.32□□□□□ -1.72
CDH11-208ENST00000563492 CEBPGP53567 150 aa4.32□□□□□ -1.72
CDH11-208ENST00000563492 ALKAL2Q6UX46 152 aa4.32□□□□□ -1.72
CDH11-208ENST00000563492 SLC51BQ86UW2 128 aa4.32□□□□□ -1.72
CDH11-208ENST00000563492 TCTE3Q8IZS6 198 aa4.32□□□□□ -1.72
CDH11-208ENST00000563492 STPG4Q8N801 248 aa4.32□□□□□ -1.72
CDH11-208ENST00000563492 RNF185Q96GF1 192 aa4.32□□□□□ -1.72
CDH11-208ENST00000563492 BIN3Q9NQY0 253 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms