RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 RPL39LQ96EH5 51 aaKnown RBP10.6□□□□□ -0.71
USB1-208ENST00000563207 ST20Q9HBF5 79 aa10.6□□□□□ -0.71
USB1-208ENST00000563207 TRBV24-1A0A075B6N3 115 aa10.59□□□□□ -0.71
USB1-208ENST00000563207 TRBV25-1A0A075B6N4 114 aa10.59□□□□□ -0.71
USB1-208ENST00000563207 SDHAF1A6NFY7 115 aa10.59□□□□□ -0.71
USB1-208ENST00000563207 PHOX2AO14813 284 aa10.59□□□□□ -0.71
USB1-208ENST00000563207 LINC01556Q5JQF7 62 aa10.59□□□□□ -0.71
USB1-208ENST00000563207 C10orf126Q8N4M7 172 aa10.59□□□□□ -0.71
USB1-208ENST00000563207 CHCHD7Q9BUK0 85 aa10.59□□□□□ -0.71
USB1-208ENST00000563207 URGCP-MRPS24S4R325 110 aa10.59□□□□□ -0.71
USB1-208ENST00000563207 NCR2O95944 276 aa10.58□□□□□ -0.72
USB1-208ENST00000563207 COTL1Q14019 142 aa10.58□□□□□ -0.72
USB1-208ENST00000563207 IQCJQ1A5X6 159 aa10.58□□□□□ -0.72
USB1-208ENST00000563207 ORMDL3Q8N138 153 aa10.58□□□□□ -0.72
USB1-208ENST00000563207 NRACQ8N912 160 aa10.58□□□□□ -0.72
USB1-208ENST00000563207 C20orf78Q9BR46 151 aa10.58□□□□□ -0.72
USB1-208ENST00000563207 IGHV1-24A0A0C4DH33 117 aa10.57□□□□□ -0.72
USB1-208ENST00000563207 I3L3M4 83 aa10.57□□□□□ -0.72
USB1-208ENST00000563207 HLA-DQA1P01909 254 aa10.57□□□□□ -0.72
USB1-208ENST00000563207 POLR2KP53803 58 aaKnown RBP10.57□□□□□ -0.72
USB1-208ENST00000563207 SUMO2P61956 95 aaKnown RBP10.57□□□□□ -0.72
USB1-208ENST00000563207 TMEM70Q9BUB7 260 aa10.57□□□□□ -0.72
USB1-208ENST00000563207 GNB1LQ9BYB4 327 aa10.57□□□□□ -0.72
USB1-208ENST00000563207 LAMTOR2Q9Y2Q5 125 aa10.57□□□□□ -0.72
USB1-208ENST00000563207 TRBV27A0A0K0K1C4 114 aa10.56□□□□□ -0.72
USB1-208ENST00000563207 D6R8Y8 96 aa10.56□□□□□ -0.72
USB1-208ENST00000563207 SMKR1H3BMG3 65 aa10.56□□□□□ -0.72
USB1-208ENST00000563207 VCYO14598 125 aa10.56□□□□□ -0.72
USB1-208ENST00000563207 GAS8-AS1O95177 125 aa10.56□□□□□ -0.72
USB1-208ENST00000563207 PMCHP20382 165 aa10.56□□□□□ -0.72
USB1-208ENST00000563207 RPS10P46783 165 aaKnown RBP10.56□□□□□ -0.72
USB1-208ENST00000563207 RPL32P62910 135 aaKnown RBP10.56□□□□□ -0.72
USB1-208ENST00000563207 TMEM136Q6ZRR5 245 aa10.56□□□□□ -0.72
USB1-208ENST00000563207 NTM-AS1Q6ZSK4 140 aa10.56□□□□□ -0.72
USB1-208ENST00000563207 TCAPO15273 167 aa10.55□□□□□ -0.72
USB1-208ENST00000563207 MT-ND6P03923 174 aa10.55□□□□□ -0.72
USB1-208ENST00000563207 ELOBQ15370 118 aa10.55□□□□□ -0.72
USB1-208ENST00000563207 NIT1Q86X76 327 aa10.55□□□□□ -0.72
USB1-208ENST00000563207 A0A087WX48 190 aa10.54□□□□□ -0.72
USB1-208ENST00000563207 TNFRSF6BO95407 300 aa10.54□□□□□ -0.72
USB1-208ENST00000563207 Q8N1X5 172 aa10.54□□□□□ -0.72
USB1-208ENST00000563207 CHCHD5Q9BSY4 110 aa10.54□□□□□ -0.72
USB1-208ENST00000563207 TMEM243Q9BU79 118 aa10.54□□□□□ -0.72
USB1-208ENST00000563207 TMEM262E9PQX1 116 aa10.53□□□□□ -0.72
USB1-208ENST00000563207 AMTP48728 403 aa10.53□□□□□ -0.72
USB1-208ENST00000563207 ATRAIDQ6UW56 229 aa10.53□□□□□ -0.72
USB1-208ENST00000563207 PRELID3AQ96N28 172 aa10.53□□□□□ -0.72
USB1-208ENST00000563207 KIR2DL4Q99706 377 aa10.53□□□□□ -0.72
USB1-208ENST00000563207 SMCO4Q9NRQ5 59 aa10.53□□□□□ -0.72
USB1-208ENST00000563207 PRSS47A8MTI9 375 aa10.52□□□□□ -0.73
USB1-208ENST00000563207 IBA57-AS1B1ANH7 110 aa10.52□□□□□ -0.73
USB1-208ENST00000563207 H7C423 109 aa10.52□□□□□ -0.73
USB1-208ENST00000563207 APCSP02743 223 aa10.52□□□□□ -0.73
USB1-208ENST00000563207 LAGE3Q14657 143 aa10.52□□□□□ -0.73
USB1-208ENST00000563207 NFE4Q86UQ8 179 aa10.52□□□□□ -0.73
USB1-208ENST00000563207 UBE2L6O14933 153 aa10.51□□□□□ -0.73
USB1-208ENST00000563207 IGHV3-30P01768 117 aa10.51□□□□□ -0.73
USB1-208ENST00000563207 IGHV3-33P01772 117 aa10.51□□□□□ -0.73
USB1-208ENST00000563207 IGHV3-30-3P0DP02 117 aa10.51□□□□□ -0.73
USB1-208ENST00000563207 IGHV3-30-5P0DP03 117 aa10.51□□□□□ -0.73
USB1-208ENST00000563207 TGIF2-C20orf24A0A0A6YYL0 155 aa10.5□□□□□ -0.73
USB1-208ENST00000563207 A0A1B0GUV1 79 aa10.5□□□□□ -0.73
USB1-208ENST00000563207 TSHBP01222 138 aa10.5□□□□□ -0.73
USB1-208ENST00000563207 NPYP01303 97 aa10.5□□□□□ -0.73
USB1-208ENST00000563207 SMIM2Q9BVW6 85 aa10.5□□□□□ -0.73
USB1-208ENST00000563207 FAT1Q14517 4588 aa10.5□□□□□ -0.73
USB1-208ENST00000563207 A0A087WTM6 91 aa10.49□□□□□ -0.73
USB1-208ENST00000563207 FCER1GP30273 86 aa10.49□□□□□ -0.73
USB1-208ENST00000563207 KRTAP10-1P60331 282 aa10.49□□□□□ -0.73
USB1-208ENST00000563207 YPEL4Q96NS1 127 aa10.49□□□□□ -0.73
USB1-208ENST00000563207 MAP1LC3AQ9H492 121 aa10.49□□□□□ -0.73
USB1-208ENST00000563207 TRAV8-3A0A0A6YYJ7 113 aa10.48□□□□□ -0.73
USB1-208ENST00000563207 ESDP10768 282 aa10.48□□□□□ -0.73
USB1-208ENST00000563207 XGP55808 180 aa10.48□□□□□ -0.73
USB1-208ENST00000563207 SMAGPQ0VAQ4 97 aa10.48□□□□□ -0.73
USB1-208ENST00000563207 GAGE6Q13070 117 aa10.48□□□□□ -0.73
USB1-208ENST00000563207 MPV17L2Q567V2 206 aa10.48□□□□□ -0.73
USB1-208ENST00000563207 MRPL18Q9H0U6 180 aaKnown RBP10.48□□□□□ -0.73
USB1-208ENST00000563207 K7EMI3 77 aa10.47□□□□□ -0.73
USB1-208ENST00000563207 RBX1P62877 108 aa10.47□□□□□ -0.73
USB1-208ENST00000563207 Q0VG73 95 aa10.47□□□□□ -0.73
USB1-208ENST00000563207 FABP9Q0Z7S8 132 aa10.47□□□□□ -0.73
USB1-208ENST00000563207 ZNF25P17030 456 aaPredicted RBP10.46□□□□□ -0.73
USB1-208ENST00000563207 CBLN2Q8IUK8 224 aa10.46□□□□□ -0.73
USB1-208ENST00000563207 Q8N3U1 123 aa10.46□□□□□ -0.73
USB1-208ENST00000563207 DEFB104AQ8WTQ1 72 aa10.46□□□□□ -0.73
USB1-208ENST00000563207 TMEM18Q96B42 140 aa10.46□□□□□ -0.73
USB1-208ENST00000563207 PGPEP1Q9NXJ5 209 aa10.46□□□□□ -0.73
USB1-208ENST00000563207 KLK12Q9UKR0 248 aa10.46□□□□□ -0.73
USB1-208ENST00000563207 TRAPPC1Q9Y5R8 145 aa10.46□□□□□ -0.73
USB1-208ENST00000563207 ANGP03950 147 aaKnown RBP10.45□□□□□ -0.74
USB1-208ENST00000563207 RAB5AP20339 215 aa10.45□□□□□ -0.74
USB1-208ENST00000563207 KIAA1644Q3SXP7 199 aa10.45□□□□□ -0.74
USB1-208ENST00000563207 AMMECR1LQ6DCA0 310 aa10.45□□□□□ -0.74
USB1-208ENST00000563207 NXT2Q9NPJ8 142 aaKnown RBP10.45□□□□□ -0.74
USB1-208ENST00000563207 COX11Q9Y6N1 276 aa10.45□□□□□ -0.74
USB1-208ENST00000563207 HAMPP81172 84 aa10.44□□□□□ -0.74
USB1-208ENST00000563207 MRPL52Q86TS9 123 aaKnown RBP10.44□□□□□ -0.74
USB1-208ENST00000563207 Q8N8P6 123 aa10.44□□□□□ -0.74
USB1-208ENST00000563207 Q8N976 141 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms