RNA–Protein interactions for RNA: ENST00000562914.1

HERPUD1-205, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-205ENST00000562914 RPS20P60866 119 aaKnown RBP9.91□□□□□ -0.82
HERPUD1-205ENST00000562914 SSTP61278 116 aa9.91□□□□□ -0.82
HERPUD1-205ENST00000562914 CACNG7P62955 275 aa9.91□□□□□ -0.82
HERPUD1-205ENST00000562914 PRR3P79522 188 aaKnown RBP9.91□□□□□ -0.82
HERPUD1-205ENST00000562914 COX6A2Q02221 97 aa9.91□□□□□ -0.82
HERPUD1-205ENST00000562914 SUMO4Q6EEV6 95 aa9.91□□□□□ -0.82
HERPUD1-205ENST00000562914 RASL11AQ6T310 242 aa9.91□□□□□ -0.82
HERPUD1-205ENST00000562914 NIT2Q9NQR4 276 aa9.91□□□□□ -0.82
HERPUD1-205ENST00000562914 A0A0J9YXV3 536 aa9.9□□□□□ -0.82
HERPUD1-205ENST00000562914 NKX2-5P52952 324 aaPredicted RBP9.9□□□□□ -0.82
HERPUD1-205ENST00000562914 REG3GQ6UW15 175 aa9.9□□□□□ -0.82
HERPUD1-205ENST00000562914 C9orf62Q8N4C0 152 aa9.9□□□□□ -0.82
HERPUD1-205ENST00000562914 C15orf56Q8N910 161 aa9.9□□□□□ -0.82
HERPUD1-205ENST00000562914 FER1L6-AS1Q8NA97 138 aa9.9□□□□□ -0.82
HERPUD1-205ENST00000562914 GTSF1Q8WW33 167 aa9.9□□□□□ -0.82
HERPUD1-205ENST00000562914 LINC00474Q9P2X8 69 aa9.9□□□□□ -0.82
HERPUD1-205ENST00000562914 F2Z2F3 143 aa9.89□□□□□ -0.83
HERPUD1-205ENST00000562914 TRGC1P0CF51 173 aa9.89□□□□□ -0.83
HERPUD1-205ENST00000562914 IGLC6P0CF74 106 aa9.89□□□□□ -0.83
HERPUD1-205ENST00000562914 COTL1Q14019 142 aa9.89□□□□□ -0.83
HERPUD1-205ENST00000562914 MAJINQ3KP22 176 aa9.89□□□□□ -0.83
HERPUD1-205ENST00000562914 SPINK6Q6UWN8 80 aa9.89□□□□□ -0.83
HERPUD1-205ENST00000562914 GFRA4Q9GZZ7 299 aa9.89□□□□□ -0.83
HERPUD1-205ENST00000562914 RNF213Q63HN8 5207 aa9.89□□□□□ -0.83
HERPUD1-205ENST00000562914 XKRY2A2RUG3 117 aa9.88□□□□□ -0.83
HERPUD1-205ENST00000562914 AMTP48728 403 aa9.88□□□□□ -0.83
HERPUD1-205ENST00000562914 STPG4Q8N801 248 aa9.88□□□□□ -0.83
HERPUD1-205ENST00000562914 GAGE12HA6NDE8 117 aa9.87□□□□□ -0.83
HERPUD1-205ENST00000562914 RPL35P42766 123 aaKnown RBP9.87□□□□□ -0.83
HERPUD1-205ENST00000562914 SMIM12Q96EX1 92 aa9.87□□□□□ -0.83
HERPUD1-205ENST00000562914 TPPP3Q9BW30 176 aa9.87□□□□□ -0.83
HERPUD1-205ENST00000562914 GVQW2A0A096LPI5 108 aaPredicted RBP9.86□□□□□ -0.83
HERPUD1-205ENST00000562914 TRAV1-1A0A0B4J248 108 aa9.86□□□□□ -0.83
HERPUD1-205ENST00000562914 IGKV2-24A0A0C4DH68 120 aa9.86□□□□□ -0.83
HERPUD1-205ENST00000562914 A0A1B0GV50 99 aa9.86□□□□□ -0.83
HERPUD1-205ENST00000562914 KRTAP10-8P60410 259 aa9.86□□□□□ -0.83
HERPUD1-205ENST00000562914 OR2D3Q8NGH3 330 aa9.86□□□□□ -0.83
HERPUD1-205ENST00000562914 PRSS3P2Q8NHM4 247 aa9.86□□□□□ -0.83
HERPUD1-205ENST00000562914 H7C423 109 aa9.85□□□□□ -0.83
HERPUD1-205ENST00000562914 MANBALQ9NQG1 85 aa9.85□□□□□ -0.83
HERPUD1-205ENST00000562914 CHCHD10Q8WYQ3 142 aaPredicted RBP9.84□□□□□ -0.83
HERPUD1-205ENST00000562914 C11orf52Q96A22 123 aa9.84□□□□□ -0.83
HERPUD1-205ENST00000562914 NCR2O95944 276 aa9.83□□□□□ -0.84
HERPUD1-205ENST00000562914 IFNA1P01562 189 aa9.83□□□□□ -0.84
HERPUD1-205ENST00000562914 HIGD2BQ4VC39 106 aa9.83□□□□□ -0.84
HERPUD1-205ENST00000562914 AMMECR1LQ6DCA0 310 aa9.83□□□□□ -0.84
HERPUD1-205ENST00000562914 BIN3Q9NQY0 253 aa9.83□□□□□ -0.84
HERPUD1-205ENST00000562914 GNG13Q9P2W3 67 aa9.83□□□□□ -0.84
HERPUD1-205ENST00000562914 C19orf71A6NCJ1 209 aa9.82□□□□□ -0.84
HERPUD1-205ENST00000562914 NTF3P20783 257 aa9.82□□□□□ -0.84
HERPUD1-205ENST00000562914 BLOC1S1P78537 153 aa9.82□□□□□ -0.84
HERPUD1-205ENST00000562914 CENPWQ5EE01 88 aa9.82□□□□□ -0.84
HERPUD1-205ENST00000562914 Q6ZRP5 223 aa9.82□□□□□ -0.84
HERPUD1-205ENST00000562914 LYPD6BQ8NI32 183 aa9.82□□□□□ -0.84
HERPUD1-205ENST00000562914 A0A096LNI7 61 aa9.81□□□□□ -0.84
HERPUD1-205ENST00000562914 IGKV3OR2-268A0A0C4DH90 116 aa9.81□□□□□ -0.84
HERPUD1-205ENST00000562914 TAGLN2P37802 199 aaKnown RBP9.81□□□□□ -0.84
HERPUD1-205ENST00000562914 ALKAL2Q6UX46 152 aa9.81□□□□□ -0.84
HERPUD1-205ENST00000562914 ZNF25P17030 456 aaPredicted RBP9.8□□□□□ -0.84
HERPUD1-205ENST00000562914 CCL20P78556 96 aa9.8□□□□□ -0.84
HERPUD1-205ENST00000562914 SRSF9Q13242 221 aaKnown RBP eCLIP9.8□□□□□ -0.84
HERPUD1-205ENST00000562914 LYZL1Q6UWQ5 148 aa9.8□□□□□ -0.84
HERPUD1-205ENST00000562914 GNG4P50150 75 aa9.79□□□□□ -0.84
HERPUD1-205ENST00000562914 RNASEKQ6P5S7 137 aaKnown RBP9.79□□□□□ -0.84
HERPUD1-205ENST00000562914 CNFNQ9BYD5 112 aa9.79□□□□□ -0.84
HERPUD1-205ENST00000562914 IGHV1-58A0A0C4DH39 117 aa9.78□□□□□ -0.84
HERPUD1-205ENST00000562914 PDE6DO43924 150 aa9.78□□□□□ -0.84
HERPUD1-205ENST00000562914 CTRLP40313 264 aa9.78□□□□□ -0.84
HERPUD1-205ENST00000562914 MEF2BQ02080 365 aaPredicted RBP9.78□□□□□ -0.84
HERPUD1-205ENST00000562914 FOXI1Q12951 378 aa9.78□□□□□ -0.84
HERPUD1-205ENST00000562914 TEX261Q6UWH6 196 aa9.78□□□□□ -0.84
HERPUD1-205ENST00000562914 OR5A1Q8NGJ0 315 aa9.78□□□□□ -0.84
HERPUD1-205ENST00000562914 FAM210AQ96ND0 272 aa9.78□□□□□ -0.84
HERPUD1-205ENST00000562914 APCSP02743 223 aa9.77□□□□□ -0.85
HERPUD1-205ENST00000562914 BCL2P10415 239 aa9.77□□□□□ -0.85
HERPUD1-205ENST00000562914 FGF6P10767 208 aa9.77□□□□□ -0.85
HERPUD1-205ENST00000562914 TWIST1Q15672 202 aa9.77□□□□□ -0.85
HERPUD1-205ENST00000562914 GATD1Q8NB37 220 aa9.77□□□□□ -0.85
HERPUD1-205ENST00000562914 BTF3L4Q96K17 158 aa9.77□□□□□ -0.85
HERPUD1-205ENST00000562914 CARD19Q96LW7 228 aa9.77□□□□□ -0.85
HERPUD1-205ENST00000562914 SMIM15Q7Z3B0 74 aa9.76□□□□□ -0.85
HERPUD1-205ENST00000562914 TMEM101Q96IK0 257 aa9.76□□□□□ -0.85
HERPUD1-205ENST00000562914 FAM231BA6NCW3 169 aa9.75□□□□□ -0.85
HERPUD1-205ENST00000562914 ODF1Q14990 250 aa9.75□□□□□ -0.85
HERPUD1-205ENST00000562914 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.74□□□□□ -0.85
HERPUD1-205ENST00000562914 IGKV2-29A2NJV5 120 aaPredicted RBP9.74□□□□□ -0.85
HERPUD1-205ENST00000562914 ZNF561-AS1K7EIQ3 104 aa9.74□□□□□ -0.85
HERPUD1-205ENST00000562914 GAS8-AS1O95177 125 aa9.74□□□□□ -0.85
HERPUD1-205ENST00000562914 XCL1P47992 114 aa9.74□□□□□ -0.85
HERPUD1-205ENST00000562914 ISOC2Q96AB3 205 aa9.74□□□□□ -0.85
HERPUD1-205ENST00000562914 LINC00959A0A1B0GUT2 108 aa9.73□□□□□ -0.85
HERPUD1-205ENST00000562914 RAB19A4D1S5 217 aa9.73□□□□□ -0.85
HERPUD1-205ENST00000562914 SDHAF1A6NFY7 115 aa9.73□□□□□ -0.85
HERPUD1-205ENST00000562914 SYCNQ0VAF6 134 aa9.73□□□□□ -0.85
HERPUD1-205ENST00000562914 MED9Q9NWA0 146 aa9.73□□□□□ -0.85
HERPUD1-205ENST00000562914 TRAV26-2A0A0B4J265 109 aa9.72□□□□□ -0.85
HERPUD1-205ENST00000562914 I3L3M4 83 aa9.72□□□□□ -0.85
HERPUD1-205ENST00000562914 CCL25O15444 150 aa9.72□□□□□ -0.85
HERPUD1-205ENST00000562914 PTTG1IPP53801 180 aa9.72□□□□□ -0.85
HERPUD1-205ENST00000562914 SS18Q15532 418 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 151.4 ms