RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 AMTP48728 403 aa11.09□□□□□ -0.63
USB1-206ENST00000562534 RPL32P62910 135 aaKnown RBP11.09□□□□□ -0.63
USB1-206ENST00000562534 ELOBQ15370 118 aa11.09□□□□□ -0.63
USB1-206ENST00000562534 C6orf223Q8N319 242 aa11.09□□□□□ -0.63
USB1-206ENST00000562534 PRELID3AQ96N28 172 aa11.09□□□□□ -0.63
USB1-206ENST00000562534 TMEM243Q9BU79 118 aa11.09□□□□□ -0.63
USB1-206ENST00000562534 HYDINQ4G0P3 5121 aa11.08□□□□□ -0.64
USB1-206ENST00000562534 IBA57-AS1B1ANH7 110 aa11.08□□□□□ -0.64
USB1-206ENST00000562534 APCSP02743 223 aa11.08□□□□□ -0.64
USB1-206ENST00000562534 ATRAIDQ6UW56 229 aa11.08□□□□□ -0.64
USB1-206ENST00000562534 KIR2DL4Q99706 377 aa11.08□□□□□ -0.64
USB1-206ENST00000562534 KRTAP1-5Q9BYS1 174 aa11.08□□□□□ -0.64
USB1-206ENST00000562534 TCAPO15273 167 aa11.07□□□□□ -0.64
USB1-206ENST00000562534 MT-ND6P03923 174 aa11.07□□□□□ -0.64
USB1-206ENST00000562534 NFE4Q86UQ8 179 aa11.07□□□□□ -0.64
USB1-206ENST00000562534 DEFB104AQ8WTQ1 72 aa11.07□□□□□ -0.64
USB1-206ENST00000562534 SMCO4Q9NRQ5 59 aa11.07□□□□□ -0.64
USB1-206ENST00000562534 KMT2AQ03164 3969 aa11.07□□□□□ -0.64
USB1-206ENST00000562534 RYR2Q92736 4967 aa11.06□□□□□ -0.64
USB1-206ENST00000562534 PRSS47A8MTI9 375 aa11.06□□□□□ -0.64
USB1-206ENST00000562534 H7C423 109 aa11.06□□□□□ -0.64
USB1-206ENST00000562534 UBE2L6O14933 153 aa11.06□□□□□ -0.64
USB1-206ENST00000562534 NPYP01303 97 aa11.06□□□□□ -0.64
USB1-206ENST00000562534 TGIF2-C20orf24A0A0A6YYL0 155 aa11.05□□□□□ -0.64
USB1-206ENST00000562534 A0A1B0GUV1 79 aa11.05□□□□□ -0.64
USB1-206ENST00000562534 TSHBP01222 138 aa11.05□□□□□ -0.64
USB1-206ENST00000562534 FCER1GP30273 86 aa11.05□□□□□ -0.64
USB1-206ENST00000562534 GAGE6Q13070 117 aa11.05□□□□□ -0.64
USB1-206ENST00000562534 LAGE3Q14657 143 aa11.05□□□□□ -0.64
USB1-206ENST00000562534 LINC00336Q6ZUF6 198 aa11.05□□□□□ -0.64
USB1-206ENST00000562534 TRAV8-3A0A0A6YYJ7 113 aa11.04□□□□□ -0.64
USB1-206ENST00000562534 RTL8CO15255 209 aa11.03□□□□□ -0.64
USB1-206ENST00000562534 ESDP10768 282 aa11.03□□□□□ -0.64
USB1-206ENST00000562534 RBX1P62877 108 aa11.03□□□□□ -0.64
USB1-206ENST00000562534 FABP9Q0Z7S8 132 aa11.03□□□□□ -0.64
USB1-206ENST00000562534 MPV17L2Q567V2 206 aa11.03□□□□□ -0.64
USB1-206ENST00000562534 Q8N3U1 123 aa11.03□□□□□ -0.64
USB1-206ENST00000562534 SMIM2Q9BVW6 85 aa11.03□□□□□ -0.64
USB1-206ENST00000562534 MAP1LC3AQ9H492 121 aa11.03□□□□□ -0.64
USB1-206ENST00000562534 KLK12Q9UKR0 248 aa11.03□□□□□ -0.64
USB1-206ENST00000562534 ANGP03950 147 aaKnown RBP11.02□□□□□ -0.65
USB1-206ENST00000562534 RAB5AP20339 215 aa11.02□□□□□ -0.65
USB1-206ENST00000562534 Q0VG73 95 aa11.02□□□□□ -0.65
USB1-206ENST00000562534 KIAA1644Q3SXP7 199 aa11.02□□□□□ -0.65
USB1-206ENST00000562534 MRPL18Q9H0U6 180 aaKnown RBP11.02□□□□□ -0.65
USB1-206ENST00000562534 TRAPPC1Q9Y5R8 145 aa11.02□□□□□ -0.65
USB1-206ENST00000562534 RYR3Q15413 4870 aa11.01□□□□□ -0.65
USB1-206ENST00000562534 SMAGPQ0VAQ4 97 aa11.01□□□□□ -0.65
USB1-206ENST00000562534 AMMECR1LQ6DCA0 310 aa11.01□□□□□ -0.65
USB1-206ENST00000562534 Q8N976 141 aa11.01□□□□□ -0.65
USB1-206ENST00000562534 TMEM18Q96B42 140 aa11.01□□□□□ -0.65
USB1-206ENST00000562534 YPEL4Q96NS1 127 aa11.01□□□□□ -0.65
USB1-206ENST00000562534 DNAH6Q9C0G6 4158 aa11.01□□□□□ -0.65
USB1-206ENST00000562534 LOC389332A0A1B0GUA5 103 aa11□□□□□ -0.65
USB1-206ENST00000562534 TM2D2Q9BX73 214 aa11□□□□□ -0.65
USB1-206ENST00000562534 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.99□□□□□ -0.65
USB1-206ENST00000562534 IGKV2-29A2NJV5 120 aaPredicted RBP10.99□□□□□ -0.65
USB1-206ENST00000562534 K7EMI3 77 aa10.99□□□□□ -0.65
USB1-206ENST00000562534 ZNF25P17030 456 aaPredicted RBP10.99□□□□□ -0.65
USB1-206ENST00000562534 CBLN2Q8IUK8 224 aa10.99□□□□□ -0.65
USB1-206ENST00000562534 Q8N8P6 123 aa10.99□□□□□ -0.65
USB1-206ENST00000562534 RMI2Q96E14 147 aa10.99□□□□□ -0.65
USB1-206ENST00000562534 ALKBH7Q9BT30 221 aaPredicted RBP10.99□□□□□ -0.65
USB1-206ENST00000562534 NXT2Q9NPJ8 142 aaKnown RBP10.99□□□□□ -0.65
USB1-206ENST00000562534 COX11Q9Y6N1 276 aa10.99□□□□□ -0.65
USB1-206ENST00000562534 PRSS29PA6NIE9 313 aa10.98□□□□□ -0.65
USB1-206ENST00000562534 CRPP02741 224 aa10.98□□□□□ -0.65
USB1-206ENST00000562534 FGF6P10767 208 aa10.98□□□□□ -0.65
USB1-206ENST00000562534 RNASEKQ6P5S7 137 aaKnown RBP10.98□□□□□ -0.65
USB1-206ENST00000562534 UBE2WQ96B02 151 aa10.98□□□□□ -0.65
USB1-206ENST00000562534 TMEM101Q96IK0 257 aa10.98□□□□□ -0.65
USB1-206ENST00000562534 Q9HAA7 133 aa10.98□□□□□ -0.65
USB1-206ENST00000562534 IGLV4-60A0A075B6I1 120 aa10.97□□□□□ -0.65
USB1-206ENST00000562534 ENHOQ6UWT2 76 aa10.97□□□□□ -0.65
USB1-206ENST00000562534 Q6ZRN7 208 aaPredicted RBP10.97□□□□□ -0.65
USB1-206ENST00000562534 MRPL52Q86TS9 123 aaKnown RBP10.97□□□□□ -0.65
USB1-206ENST00000562534 LINC00269Q8N2A0 174 aa10.97□□□□□ -0.65
USB1-206ENST00000562534 C20orf203Q8NBC4 194 aa10.97□□□□□ -0.65
USB1-206ENST00000562534 PRR34Q9NV39 138 aa10.97□□□□□ -0.65
USB1-206ENST00000562534 PSCAO43653 123 aa10.96□□□□□ -0.65
USB1-206ENST00000562534 MIAQ16674 131 aa10.96□□□□□ -0.65
USB1-206ENST00000562534 DGAT2L7PQ6IED9 249 aa10.96□□□□□ -0.65
USB1-206ENST00000562534 PRSS3P2Q8NHM4 247 aa10.96□□□□□ -0.65
USB1-206ENST00000562534 CSDC2Q9Y534 153 aaKnown RBP10.96□□□□□ -0.65
USB1-206ENST00000562534 G0S2P27469 103 aa10.95□□□□□ -0.66
USB1-206ENST00000562534 IFI27P40305 119 aaPredicted RBP10.95□□□□□ -0.66
USB1-206ENST00000562534 REG3AQ06141 175 aa10.95□□□□□ -0.66
USB1-206ENST00000562534 OR5A1Q8NGJ0 315 aa10.95□□□□□ -0.66
USB1-206ENST00000562534 TRAV8-4A0A0B4J246 113 aa10.94□□□□□ -0.66
USB1-206ENST00000562534 TNP2Q05952 138 aa10.94□□□□□ -0.66
USB1-206ENST00000562534 ORMDL2Q53FV1 153 aa10.94□□□□□ -0.66
USB1-206ENST00000562534 TIMM21Q9BVV7 248 aa10.94□□□□□ -0.66
USB1-206ENST00000562534 IGKV2D-24A0A075B6R9 120 aa10.93□□□□□ -0.66
USB1-206ENST00000562534 S100A1P23297 94 aa10.93□□□□□ -0.66
USB1-206ENST00000562534 C1orf43Q9BWL3 253 aa10.93□□□□□ -0.66
USB1-206ENST00000562534 CDC42SE2Q9NRR3 84 aa10.93□□□□□ -0.66
USB1-206ENST00000562534 EREGO14944 169 aa10.92□□□□□ -0.66
USB1-206ENST00000562534 ZNF664Q8N3J9 261 aa10.92□□□□□ -0.66
USB1-206ENST00000562534 UBE2D4Q9Y2X8 147 aa10.92□□□□□ -0.66
USB1-206ENST00000562534 COLCA2A8K830 154 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 322.7 ms