RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 KLK12Q9UKR0 248 aa11.2□□□□□ -0.62
CLK3-207ENST00000562389 I3L3M4 83 aa11.19□□□□□ -0.62
CLK3-207ENST00000562389 AMTP48728 403 aa11.19□□□□□ -0.62
CLK3-207ENST00000562389 POLR2KP53803 58 aaKnown RBP11.19□□□□□ -0.62
CLK3-207ENST00000562389 BTF3L4Q96K17 158 aa11.19□□□□□ -0.62
CLK3-207ENST00000562389 RBX1P62877 108 aa11.18□□□□□ -0.62
CLK3-207ENST00000562389 DEFB104AQ8WTQ1 72 aa11.18□□□□□ -0.62
CLK3-207ENST00000562389 TM2D2Q9BX73 214 aa11.18□□□□□ -0.62
CLK3-207ENST00000562389 TRBV27A0A0K0K1C4 114 aa11.17□□□□□ -0.62
CLK3-207ENST00000562389 APCSP02743 223 aa11.17□□□□□ -0.62
CLK3-207ENST00000562389 PMCHP20382 165 aa11.17□□□□□ -0.62
CLK3-207ENST00000562389 CKS2P33552 79 aa11.17□□□□□ -0.62
CLK3-207ENST00000562389 Q0VG73 95 aa11.17□□□□□ -0.62
CLK3-207ENST00000562389 Q8N976 141 aa11.17□□□□□ -0.62
CLK3-207ENST00000562389 TMEM242Q9NWH2 141 aa11.17□□□□□ -0.62
CLK3-207ENST00000562389 A0A1B0GUV1 79 aa11.16□□□□□ -0.62
CLK3-207ENST00000562389 UBE2L6O14933 153 aa11.16□□□□□ -0.62
CLK3-207ENST00000562389 PSCAO43653 123 aa11.16□□□□□ -0.62
CLK3-207ENST00000562389 ANGP03950 147 aaKnown RBP11.16□□□□□ -0.62
CLK3-207ENST00000562389 SUMO2P61956 95 aaKnown RBP11.16□□□□□ -0.62
CLK3-207ENST00000562389 RHEBQ15382 184 aa11.16□□□□□ -0.62
CLK3-207ENST00000562389 CLRN3Q8NCR9 226 aa11.16□□□□□ -0.62
CLK3-207ENST00000562389 UBE2WQ96B02 151 aa11.16□□□□□ -0.62
CLK3-207ENST00000562389 RMI2Q96E14 147 aa11.16□□□□□ -0.62
CLK3-207ENST00000562389 PKD1P98161 4303 aa11.15□□□□□ -0.62
CLK3-207ENST00000562389 TRBV24-1A0A075B6N3 115 aa11.15□□□□□ -0.62
CLK3-207ENST00000562389 TRAV9-1A0A075B6T8 112 aa11.15□□□□□ -0.62
CLK3-207ENST00000562389 A0A087WTM6 91 aa11.15□□□□□ -0.62
CLK3-207ENST00000562389 C7orf77A4D0Y5 90 aa11.15□□□□□ -0.62
CLK3-207ENST00000562389 D6R8Y8 96 aa11.15□□□□□ -0.62
CLK3-207ENST00000562389 H7C423 109 aa11.15□□□□□ -0.62
CLK3-207ENST00000562389 EREGO14944 169 aa11.15□□□□□ -0.62
CLK3-207ENST00000562389 TSHBP01222 138 aa11.15□□□□□ -0.62
CLK3-207ENST00000562389 CRPP02741 224 aa11.15□□□□□ -0.62
CLK3-207ENST00000562389 PPBPP02775 128 aa11.15□□□□□ -0.62
CLK3-207ENST00000562389 C20orf78Q9BR46 151 aa11.15□□□□□ -0.62
CLK3-207ENST00000562389 COX11Q9Y6N1 276 aa11.15□□□□□ -0.62
CLK3-207ENST00000562389 VCYO14598 125 aa11.14□□□□□ -0.63
CLK3-207ENST00000562389 RPL32P62910 135 aaKnown RBP11.14□□□□□ -0.63
CLK3-207ENST00000562389 ENHOQ6UWT2 76 aa11.14□□□□□ -0.63
CLK3-207ENST00000562389 PRR34Q9NV39 138 aa11.14□□□□□ -0.63
CLK3-207ENST00000562389 PHOX2AO14813 284 aa11.13□□□□□ -0.63
CLK3-207ENST00000562389 TNFRSF6BO95407 300 aa11.13□□□□□ -0.63
CLK3-207ENST00000562389 ESDP10768 282 aa11.13□□□□□ -0.63
CLK3-207ENST00000562389 SPATA12Q7Z6I5 190 aa11.13□□□□□ -0.63
CLK3-207ENST00000562389 ORMDL3Q8N138 153 aa11.13□□□□□ -0.63
CLK3-207ENST00000562389 C20orf203Q8NBC4 194 aa11.13□□□□□ -0.63
CLK3-207ENST00000562389 IGLV4-60A0A075B6I1 120 aa11.12□□□□□ -0.63
CLK3-207ENST00000562389 IGKV2D-24A0A075B6R9 120 aa11.12□□□□□ -0.63
CLK3-207ENST00000562389 LRCOL1A6NCL2 159 aa11.12□□□□□ -0.63
CLK3-207ENST00000562389 S100PP25815 95 aa11.12□□□□□ -0.63
CLK3-207ENST00000562389 MIAQ16674 131 aa11.12□□□□□ -0.63
CLK3-207ENST00000562389 NDUFA5Q16718 116 aa11.12□□□□□ -0.63
CLK3-207ENST00000562389 RPS10P5Q9NQ39 176 aa11.12□□□□□ -0.63
CLK3-207ENST00000562389 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.11□□□□□ -0.63
CLK3-207ENST00000562389 IGKV2-29A2NJV5 120 aaPredicted RBP11.11□□□□□ -0.63
CLK3-207ENST00000562389 NPYP01303 97 aa11.11□□□□□ -0.63
CLK3-207ENST00000562389 APOC3P02656 99 aa11.11□□□□□ -0.63
CLK3-207ENST00000562389 KRTAP10-2P60368 255 aa11.11□□□□□ -0.63
CLK3-207ENST00000562389 TMEM136Q6ZRR5 245 aa11.11□□□□□ -0.63
CLK3-207ENST00000562389 LINC00269Q8N2A0 174 aa11.11□□□□□ -0.63
CLK3-207ENST00000562389 KIR2DL4Q99706 377 aa11.11□□□□□ -0.63
CLK3-207ENST00000562389 FCER1GP30273 86 aa11.1□□□□□ -0.63
CLK3-207ENST00000562389 REG3AQ06141 175 aa11.1□□□□□ -0.63
CLK3-207ENST00000562389 AMMECR1LQ6DCA0 310 aa11.1□□□□□ -0.63
CLK3-207ENST00000562389 SVBPQ8N300 66 aa11.1□□□□□ -0.63
CLK3-207ENST00000562389 PRELID3AQ96N28 172 aa11.1□□□□□ -0.63
CLK3-207ENST00000562389 SMIM2Q9BVW6 85 aa11.1□□□□□ -0.63
CLK3-207ENST00000562389 C1orf43Q9BWL3 253 aa11.1□□□□□ -0.63
CLK3-207ENST00000562389 LAMTOR2Q9Y2Q5 125 aa11.1□□□□□ -0.63
CLK3-207ENST00000562389 PKHD1P08F94 4074 aa11.1□□□□□ -0.63
CLK3-207ENST00000562389 DNAH11Q96DT5 4516 aa11.09□□□□□ -0.63
CLK3-207ENST00000562389 TCAPO15273 167 aa11.09□□□□□ -0.63
CLK3-207ENST00000562389 SNAPINO95295 136 aa11.09□□□□□ -0.63
CLK3-207ENST00000562389 FGF6P10767 208 aa11.09□□□□□ -0.63
CLK3-207ENST00000562389 ZNF25P17030 456 aaPredicted RBP11.09□□□□□ -0.63
CLK3-207ENST00000562389 CLPSL2Q6UWE3 100 aa11.09□□□□□ -0.63
CLK3-207ENST00000562389 MAPKAPK5-AS1Q8N8E1 139 aa11.09□□□□□ -0.63
CLK3-207ENST00000562389 C16orf90A8MZG2 172 aa11.08□□□□□ -0.64
CLK3-207ENST00000562389 CDPF1Q6NVV7 123 aa11.07□□□□□ -0.64
CLK3-207ENST00000562389 RNASEKQ6P5S7 137 aaKnown RBP11.07□□□□□ -0.64
CLK3-207ENST00000562389 MRPL52Q86TS9 123 aaKnown RBP11.07□□□□□ -0.64
CLK3-207ENST00000562389 Q8N814 137 aa11.07□□□□□ -0.64
CLK3-207ENST00000562389 PGPEP1Q9NXJ5 209 aa11.07□□□□□ -0.64
CLK3-207ENST00000562389 TRAV8-4A0A0B4J246 113 aa11.06□□□□□ -0.64
CLK3-207ENST00000562389 PRSS47A8MTI9 375 aa11.06□□□□□ -0.64
CLK3-207ENST00000562389 HLA-DQA1P01909 254 aa11.06□□□□□ -0.64
CLK3-207ENST00000562389 WFDC2Q14508 124 aa11.06□□□□□ -0.64
CLK3-207ENST00000562389 COX19Q49B96 90 aa11.06□□□□□ -0.64
CLK3-207ENST00000562389 NTN5Q8WTR8 489 aaPredicted RBP11.05□□□□□ -0.64
CLK3-207ENST00000562389 BAALCQ8WXS3 180 aa11.05□□□□□ -0.64
CLK3-207ENST00000562389 TMEM101Q96IK0 257 aa11.05□□□□□ -0.64
CLK3-207ENST00000562389 GNB1LQ9BYB4 327 aa11.05□□□□□ -0.64
CLK3-207ENST00000562389 SMAGPQ0VAQ4 97 aa11.04□□□□□ -0.64
CLK3-207ENST00000562389 KRTAP26-1Q6PEX3 210 aa11.04□□□□□ -0.64
CLK3-207ENST00000562389 TMEM18Q96B42 140 aa11.04□□□□□ -0.64
CLK3-207ENST00000562389 MAP1LC3AQ9H492 121 aa11.04□□□□□ -0.64
CLK3-207ENST00000562389 DYNC1H1Q14204 4646 aaKnown RBP11.04□□□□□ -0.64
CLK3-207ENST00000562389 OR5A1Q8NGJ0 315 aa11.03□□□□□ -0.64
CLK3-207ENST00000562389 CSDC2Q9Y534 153 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms