RNA–Protein interactions for RNA: ENST00000562325.5

CDH11-203, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-203ENST00000562325 LINC00474Q9P2X8 69 aa12.17□□□□□ -0.46
CDH11-203ENST00000562325 A0A0J9YXV3 536 aa12.16□□□□□ -0.46
CDH11-203ENST00000562325 ZNF345Q14585 488 aa12.16□□□□□ -0.46
CDH11-203ENST00000562325 KCNRGQ8N5I3 272 aa12.16□□□□□ -0.46
CDH11-203ENST00000562325 FAM213BQ8TBF2 198 aa12.16□□□□□ -0.46
CDH11-203ENST00000562325 C11orf52Q96A22 123 aa12.16□□□□□ -0.46
CDH11-203ENST00000562325 GVQW2A0A096LPI5 108 aaPredicted RBP12.15□□□□□ -0.46
CDH11-203ENST00000562325 AMTP48728 403 aa12.15□□□□□ -0.46
CDH11-203ENST00000562325 RAB5CP51148 216 aa12.14□□□□□ -0.47
CDH11-203ENST00000562325 MAJINQ3KP22 176 aa12.14□□□□□ -0.47
CDH11-203ENST00000562325 REG3GQ6UW15 175 aa12.14□□□□□ -0.47
CDH11-203ENST00000562325 SPINK6Q6UWN8 80 aa12.14□□□□□ -0.47
CDH11-203ENST00000562325 GTSF1Q8WW33 167 aa12.14□□□□□ -0.47
CDH11-203ENST00000562325 TPPP3Q9BW30 176 aa12.14□□□□□ -0.47
CDH11-203ENST00000562325 C19orf71A6NCJ1 209 aa12.13□□□□□ -0.47
CDH11-203ENST00000562325 GAGE12HA6NDE8 117 aa12.13□□□□□ -0.47
CDH11-203ENST00000562325 H7C423 109 aa12.13□□□□□ -0.47
CDH11-203ENST00000562325 OR2D3Q8NGH3 330 aa12.13□□□□□ -0.47
CDH11-203ENST00000562325 MANBALQ9NQG1 85 aa12.13□□□□□ -0.47
CDH11-203ENST00000562325 H2AFB1P0C5Y9 115 aa12.12□□□□□ -0.47
CDH11-203ENST00000562325 KRTAP10-8P60410 259 aa12.12□□□□□ -0.47
CDH11-203ENST00000562325 STPG4Q8N801 248 aa12.12□□□□□ -0.47
CDH11-203ENST00000562325 PRSS3P2Q8NHM4 247 aa12.12□□□□□ -0.47
CDH11-203ENST00000562325 NCR2O95944 276 aa12.11□□□□□ -0.47
CDH11-203ENST00000562325 CENPWQ5EE01 88 aa12.11□□□□□ -0.47
CDH11-203ENST00000562325 BIN3Q9NQY0 253 aa12.11□□□□□ -0.47
CDH11-203ENST00000562325 IGKV2-24A0A0C4DH68 120 aa12.1□□□□□ -0.47
CDH11-203ENST00000562325 C9orf62Q8N4C0 152 aa12.1□□□□□ -0.47
CDH11-203ENST00000562325 CHCHD10Q8WYQ3 142 aaPredicted RBP12.1□□□□□ -0.47
CDH11-203ENST00000562325 CNFNQ9BYD5 112 aa12.1□□□□□ -0.47
CDH11-203ENST00000562325 NTF3P20783 257 aa12.09□□□□□ -0.47
CDH11-203ENST00000562325 EIF5AP63241 154 aaKnown RBP12.09□□□□□ -0.47
CDH11-203ENST00000562325 CCL20P78556 96 aa12.09□□□□□ -0.47
CDH11-203ENST00000562325 TRAV1-1A0A0B4J248 108 aa12.08□□□□□ -0.48
CDH11-203ENST00000562325 A0A1B0GV50 99 aa12.08□□□□□ -0.48
CDH11-203ENST00000562325 IFNA1P01562 189 aa12.08□□□□□ -0.48
CDH11-203ENST00000562325 HIGD2BQ4VC39 106 aa12.08□□□□□ -0.48
CDH11-203ENST00000562325 ZNF25P17030 456 aaPredicted RBP12.07□□□□□ -0.48
CDH11-203ENST00000562325 CTRLP40313 264 aa12.07□□□□□ -0.48
CDH11-203ENST00000562325 GNG4P50150 75 aa12.07□□□□□ -0.48
CDH11-203ENST00000562325 AMMECR1LQ6DCA0 310 aa12.07□□□□□ -0.48
CDH11-203ENST00000562325 LYZL1Q6UWQ5 148 aa12.07□□□□□ -0.48
CDH11-203ENST00000562325 BATF3Q9NR55 127 aa12.07□□□□□ -0.48
CDH11-203ENST00000562325 A0A096LNI7 61 aa12.06□□□□□ -0.48
CDH11-203ENST00000562325 HMSDA8MTL9 139 aa12.06□□□□□ -0.48
CDH11-203ENST00000562325 SRSF9Q13242 221 aaKnown RBP eCLIP12.06□□□□□ -0.48
CDH11-203ENST00000562325 Q6ZRP5 223 aa12.06□□□□□ -0.48
CDH11-203ENST00000562325 FAM210AQ96ND0 272 aa12.06□□□□□ -0.48
CDH11-203ENST00000562325 FOXI1Q12951 378 aa12.05□□□□□ -0.48
CDH11-203ENST00000562325 TEX261Q6UWH6 196 aa12.05□□□□□ -0.48
CDH11-203ENST00000562325 GNG13Q9P2W3 67 aa12.05□□□□□ -0.48
CDH11-203ENST00000562325 TEX46H3BTG2 121 aa12.04□□□□□ -0.48
CDH11-203ENST00000562325 PDE6DO43924 150 aa12.04□□□□□ -0.48
CDH11-203ENST00000562325 GATD1Q8NB37 220 aa12.04□□□□□ -0.48
CDH11-203ENST00000562325 LYPD6BQ8NI32 183 aa12.04□□□□□ -0.48
CDH11-203ENST00000562325 IGHV1-58A0A0C4DH39 117 aa12.03□□□□□ -0.48
CDH11-203ENST00000562325 IGKV3OR2-268A0A0C4DH90 116 aa12.03□□□□□ -0.48
CDH11-203ENST00000562325 KANTRA0A1W2PQU2 76 aa12.03□□□□□ -0.48
CDH11-203ENST00000562325 BCL2L11O43521 198 aa12.03□□□□□ -0.48
CDH11-203ENST00000562325 OR5A1Q8NGJ0 315 aa12.03□□□□□ -0.48
CDH11-203ENST00000562325 APCSP02743 223 aa12.02□□□□□ -0.49
CDH11-203ENST00000562325 FGF6P10767 208 aa12.02□□□□□ -0.49
CDH11-203ENST00000562325 TWIST1Q15672 202 aa12.02□□□□□ -0.49
CDH11-203ENST00000562325 RNASEKQ6P5S7 137 aaKnown RBP12.02□□□□□ -0.49
CDH11-203ENST00000562325 MEF2BQ02080 365 aaPredicted RBP12.01□□□□□ -0.49
CDH11-203ENST00000562325 Q6ZNX1 250 aa12.01□□□□□ -0.49
CDH11-203ENST00000562325 CARD19Q96LW7 228 aa12.01□□□□□ -0.49
CDH11-203ENST00000562325 SMIM15Q7Z3B0 74 aa12□□□□□ -0.49
CDH11-203ENST00000562325 BTF3L4Q96K17 158 aa12□□□□□ -0.49
CDH11-203ENST00000562325 TRBV20OR9-2A0A075B6H5 130 aa11.99□□□□□ -0.49
CDH11-203ENST00000562325 RAB19A4D1S5 217 aa11.99□□□□□ -0.49
CDH11-203ENST00000562325 TMEM101Q96IK0 257 aa11.99□□□□□ -0.49
CDH11-203ENST00000562325 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.98□□□□□ -0.49
CDH11-203ENST00000562325 IGKV2-29A2NJV5 120 aaPredicted RBP11.98□□□□□ -0.49
CDH11-203ENST00000562325 SDHAF1A6NFY7 115 aa11.98□□□□□ -0.49
CDH11-203ENST00000562325 NUDT10Q8NFP7 164 aa11.98□□□□□ -0.49
CDH11-203ENST00000562325 NUDT11Q96G61 164 aa11.98□□□□□ -0.49
CDH11-203ENST00000562325 TRAV26-2A0A0B4J265 109 aa11.97□□□□□ -0.49
CDH11-203ENST00000562325 TRBV6-5A0A0K0K1A5 114 aa11.97□□□□□ -0.49
CDH11-203ENST00000562325 LINC00959A0A1B0GUT2 108 aa11.97□□□□□ -0.49
CDH11-203ENST00000562325 SMLR1H3BR10 107 aa11.97□□□□□ -0.49
CDH11-203ENST00000562325 XCL1P47992 114 aa11.97□□□□□ -0.49
CDH11-203ENST00000562325 ODF1Q14990 250 aa11.97□□□□□ -0.49
CDH11-203ENST00000562325 RGS21Q2M5E4 152 aa11.97□□□□□ -0.49
CDH11-203ENST00000562325 EIF5AL1Q6IS14 154 aaKnown RBP11.97□□□□□ -0.49
CDH11-203ENST00000562325 I3L3M4 83 aa11.96□□□□□ -0.49
CDH11-203ENST00000562325 ZNF561-AS1K7EIQ3 104 aa11.96□□□□□ -0.49
CDH11-203ENST00000562325 CCL25O15444 150 aa11.96□□□□□ -0.49
CDH11-203ENST00000562325 TAGLN2P37802 199 aaKnown RBP11.96□□□□□ -0.49
CDH11-203ENST00000562325 SYCNQ0VAF6 134 aa11.96□□□□□ -0.49
CDH11-203ENST00000562325 CD164L2Q6UWJ8 174 aa11.96□□□□□ -0.49
CDH11-203ENST00000562325 ISOC2Q96AB3 205 aa11.96□□□□□ -0.49
CDH11-203ENST00000562325 RPL39LQ96EH5 51 aaKnown RBP11.96□□□□□ -0.49
CDH11-203ENST00000562325 RPP21Q9H633 154 aaKnown RBP11.96□□□□□ -0.49
CDH11-203ENST00000562325 MED9Q9NWA0 146 aa11.96□□□□□ -0.49
CDH11-203ENST00000562325 FAM231BA6NCW3 169 aa11.95□□□□□ -0.5
CDH11-203ENST00000562325 PTTG1IPP53801 180 aa11.95□□□□□ -0.5
CDH11-203ENST00000562325 SS18Q15532 418 aa11.95□□□□□ -0.5
CDH11-203ENST00000562325 ESDP10768 282 aa11.94□□□□□ -0.5
CDH11-203ENST00000562325 MRPL52Q86TS9 123 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms