RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 HIST2H2BDQ6DRA6 164 aa8.46□□□□□ -1.06
RPAP1-204ENST00000562303 ZFHX2Q9C0A1 2572 aaPredicted RBP8.46□□□□□ -1.06
RPAP1-204ENST00000562303 H7C423 109 aa8.46□□□□□ -1.06
RPAP1-204ENST00000562303 LY6G6CO95867 125 aa8.46□□□□□ -1.06
RPAP1-204ENST00000562303 UBE2D4Q9Y2X8 147 aa8.46□□□□□ -1.06
RPAP1-204ENST00000562303 TDRG1Q3Y452 100 aa8.45□□□□□ -1.06
RPAP1-204ENST00000562303 COA6Q5JTJ3 125 aaKnown RBP8.45□□□□□ -1.06
RPAP1-204ENST00000562303 ZNF843Q8N446 348 aa8.45□□□□□ -1.06
RPAP1-204ENST00000562303 HIVEP2P31629 2446 aa8.45□□□□□ -1.06
RPAP1-204ENST00000562303 SHANK1Q9Y566 2161 aa8.45□□□□□ -1.06
RPAP1-204ENST00000562303 A0A0J9YXY3 114 aa8.45□□□□□ -1.06
RPAP1-204ENST00000562303 K7ERS5 55 aa8.45□□□□□ -1.06
RPAP1-204ENST00000562303 TRAV23DV6A0A075B6W5 121 aa8.45□□□□□ -1.06
RPAP1-204ENST00000562303 C19orf71A6NCJ1 209 aa8.45□□□□□ -1.06
RPAP1-204ENST00000562303 SYCNQ0VAF6 134 aa8.45□□□□□ -1.06
RPAP1-204ENST00000562303 XAGE1AQ9HD64 81 aa8.45□□□□□ -1.06
RPAP1-204ENST00000562303 ATRXP46100 2492 aa8.44□□□□□ -1.06
RPAP1-204ENST00000562303 PCNX2A6NKB5 2137 aa8.44□□□□□ -1.06
RPAP1-204ENST00000562303 CHD3Q12873 2000 aaKnown RBP8.44□□□□□ -1.06
RPAP1-204ENST00000562303 NEXN-AS1Q8NBZ9 246 aa8.44□□□□□ -1.06
RPAP1-204ENST00000562303 WFDC10BQ8IUB3 73 aa8.43□□□□□ -1.06
RPAP1-204ENST00000562303 C9orf85Q96MD7 179 aa8.43□□□□□ -1.06
RPAP1-204ENST00000562303 TNRC6BQ9UPQ9 1833 aaKnown RBP8.43□□□□□ -1.06
RPAP1-204ENST00000562303 J3KT08 172 aa8.43□□□□□ -1.06
RPAP1-204ENST00000562303 SPINK6Q6UWN8 80 aa8.43□□□□□ -1.06
RPAP1-204ENST00000562303 SCXQ7RTU7 201 aa8.43□□□□□ -1.06
RPAP1-204ENST00000562303 C20orf173Q96LM9 149 aa8.43□□□□□ -1.06
RPAP1-204ENST00000562303 PLA2G2EQ9NZK7 142 aa8.43□□□□□ -1.06
RPAP1-204ENST00000562303 TRBV6-8A0A0A6YYG3 113 aa8.42□□□□□ -1.06
RPAP1-204ENST00000562303 LINC00322Q6ZN03 302 aaPredicted RBP8.42□□□□□ -1.06
RPAP1-204ENST00000562303 PPDPFQ9H3Y8 114 aa8.42□□□□□ -1.06
RPAP1-204ENST00000562303 CDKN2A-AS1Q9UH64 79 aa8.42□□□□□ -1.06
RPAP1-204ENST00000562303 C3orf22Q8N5N4 141 aa8.42□□□□□ -1.06
RPAP1-204ENST00000562303 MUC6Q6W4X9 2439 aa8.42□□□□□ -1.06
RPAP1-204ENST00000562303 NLRC5Q86WI3 1866 aa8.42□□□□□ -1.06
RPAP1-204ENST00000562303 FRMD6-AS1P0C7T7 363 aa8.42□□□□□ -1.06
RPAP1-204ENST00000562303 SPTSSBQ8NFR3 76 aa8.41□□□□□ -1.06
RPAP1-204ENST00000562303 BBC3Q96PG8 261 aaPredicted RBP8.41□□□□□ -1.06
RPAP1-204ENST00000562303 SLPIP03973 132 aa8.41□□□□□ -1.06
RPAP1-204ENST00000562303 CFAP126Q5VTH2 177 aa8.41□□□□□ -1.06
RPAP1-204ENST00000562303 HRCT1Q6UXD1 115 aa8.41□□□□□ -1.06
RPAP1-204ENST00000562303 DCANP1Q8TF63 244 aa8.41□□□□□ -1.06
RPAP1-204ENST00000562303 PTH2Q96A98 100 aa8.41□□□□□ -1.06
RPAP1-204ENST00000562303 TAX1BP3O14907 124 aa8.41□□□□□ -1.06
RPAP1-204ENST00000562303 UBE2D3P61077 147 aa8.41□□□□□ -1.06
RPAP1-204ENST00000562303 ZNF706Q9Y5V0 76 aaPredicted RBP8.41□□□□□ -1.06
RPAP1-204ENST00000562303 LY6LH3BQJ8 138 aa8.4□□□□□ -1.06
RPAP1-204ENST00000562303 C10orf99Q6UWK7 81 aa8.4□□□□□ -1.06
RPAP1-204ENST00000562303 NUP210Q8TEM1 1887 aaPredicted RBP8.4□□□□□ -1.06
RPAP1-204ENST00000562303 TRBV6-4A0A1B0GX49 114 aa8.4□□□□□ -1.06
RPAP1-204ENST00000562303 TCL1BO95988 128 aa8.4□□□□□ -1.06
RPAP1-204ENST00000562303 LINC00643Q86TS7 51 aa8.4□□□□□ -1.06
RPAP1-204ENST00000562303 IGKV2-28A0A075B6P5 120 aa8.4□□□□□ -1.06
RPAP1-204ENST00000562303 TEX49A0A1B0GTD5 131 aa8.4□□□□□ -1.06
RPAP1-204ENST00000562303 IBA57-AS1B1ANH7 110 aa8.4□□□□□ -1.06
RPAP1-204ENST00000562303 IGKV2D-28P01615 120 aa8.4□□□□□ -1.06
RPAP1-204ENST00000562303 LYPD6Q86Y78 171 aa8.4□□□□□ -1.06
RPAP1-204ENST00000562303 C1orf158Q8N1D5 194 aa8.4□□□□□ -1.07
RPAP1-204ENST00000562303 Q8N976 141 aa8.4□□□□□ -1.07
RPAP1-204ENST00000562303 SPANXB1Q9NS25 103 aaPredicted RBP8.4□□□□□ -1.07
RPAP1-204ENST00000562303 KPRPQ5T749 579 aaPredicted RBP8.39□□□□□ -1.07
RPAP1-204ENST00000562303 A0A0J9YWU9 116 aa8.38□□□□□ -1.07
RPAP1-204ENST00000562303 BRK1Q8WUW1 75 aa8.38□□□□□ -1.07
RPAP1-204ENST00000562303 PIK3CD-AS1Q5SR53 167 aa8.38□□□□□ -1.07
RPAP1-204ENST00000562303 IGLV4-3A0A075B6K6 122 aa8.38□□□□□ -1.07
RPAP1-204ENST00000562303 ANAPC1Q9H1A4 1944 aa8.38□□□□□ -1.07
RPAP1-204ENST00000562303 IGLC6P0CF74 106 aa8.38□□□□□ -1.07
RPAP1-204ENST00000562303 LINC00574Q9H8X3 128 aa8.37□□□□□ -1.07
RPAP1-204ENST00000562303 NOTCH4Q99466 2003 aa8.37□□□□□ -1.07
RPAP1-204ENST00000562303 TMEM223A0PJW6 202 aa8.37□□□□□ -1.07
RPAP1-204ENST00000562303 PROK1P58294 105 aa8.37□□□□□ -1.07
RPAP1-204ENST00000562303 GDF5OSQ5U4N7 250 aa8.37□□□□□ -1.07
RPAP1-204ENST00000562303 SDIM1Q6ZPB5 146 aa8.37□□□□□ -1.07
RPAP1-204ENST00000562303 ZNF22P17026 224 aaPredicted RBP8.37□□□□□ -1.07
RPAP1-204ENST00000562303 LINC01006Q8NI28 216 aa8.37□□□□□ -1.07
RPAP1-204ENST00000562303 TNRC6AQ8NDV7 1962 aaKnown RBP8.37□□□□□ -1.07
RPAP1-204ENST00000562303 CCKP06307 115 aa8.36□□□□□ -1.07
RPAP1-204ENST00000562303 LINC00308Q8TCZ7 52 aa8.36□□□□□ -1.07
RPAP1-204ENST00000562303 ZNF702PQ9H963 129 aa8.36□□□□□ -1.07
RPAP1-204ENST00000562303 C6orf99Q4VX62 202 aa8.36□□□□□ -1.07
RPAP1-204ENST00000562303 ENHOQ6UWT2 76 aa8.36□□□□□ -1.07
RPAP1-204ENST00000562303 C22orf34Q6ZV56 151 aa8.36□□□□□ -1.07
RPAP1-204ENST00000562303 PSMG3-AS1Q96PY0 264 aa8.36□□□□□ -1.07
RPAP1-204ENST00000562303 C3orf84H3BNL1 204 aa8.36□□□□□ -1.07
RPAP1-204ENST00000562303 RBX1P62877 108 aa8.36□□□□□ -1.07
RPAP1-204ENST00000562303 LINC00526Q96FQ7 95 aa8.36□□□□□ -1.07
RPAP1-204ENST00000562303 NOTCH2Q04721 2471 aa8.36□□□□□ -1.07
RPAP1-204ENST00000562303 A0A1B0GXF2 115 aa8.36□□□□□ -1.07
RPAP1-204ENST00000562303 MPLKIPQ8TAP9 179 aa8.36□□□□□ -1.07
RPAP1-204ENST00000562303 C20orf197Q8N268 126 aa8.35□□□□□ -1.07
RPAP1-204ENST00000562303 LOC107984640A0A0U1RRK4 108 aa8.35□□□□□ -1.07
RPAP1-204ENST00000562303 M0QY20 66 aa8.35□□□□□ -1.07
RPAP1-204ENST00000562303 CLUHP3Q96NS8 147 aa8.35□□□□□ -1.07
RPAP1-204ENST00000562303 IGLV9-49A0A0B4J1Y8 123 aa8.35□□□□□ -1.07
RPAP1-204ENST00000562303 WFDC10AQ9H1F0 79 aa8.35□□□□□ -1.07
RPAP1-204ENST00000562303 IGLV4-69A0A075B6H9 119 aa8.35□□□□□ -1.07
RPAP1-204ENST00000562303 PRR15LQ9BU68 103 aa8.35□□□□□ -1.07
RPAP1-204ENST00000562303 ZFAND3Q9H8U3 227 aa8.34□□□□□ -1.07
RPAP1-204ENST00000562303 UBE2D2P62837 147 aa8.34□□□□□ -1.07
RPAP1-204ENST00000562303 FSTL3O95633 263 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms