RNA–Protein interactions for RNA: ENST00000561749.1

SMPD3-202, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 2

Gene SMPD3, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-202ENST00000561749 ELOBQ15370 118 aa15.64■□□□□ 0.09
SMPD3-202ENST00000561749 NRACQ8N912 160 aa15.64■□□□□ 0.09
SMPD3-202ENST00000561749 TMEM70Q9BUB7 260 aa15.64■□□□□ 0.09
SMPD3-202ENST00000561749 TRAV8-3A0A0A6YYJ7 113 aa15.63■□□□□ 0.09
SMPD3-202ENST00000561749 I3L3M4 83 aa15.63■□□□□ 0.09
SMPD3-202ENST00000561749 CTDSP1Q9GZU7 261 aa15.63■□□□□ 0.09
SMPD3-202ENST00000561749 TMEM242Q9NWH2 141 aa15.63■□□□□ 0.09
SMPD3-202ENST00000561749 CARHSP1Q9Y2V2 147 aaKnown RBP15.63■□□□□ 0.09
SMPD3-202ENST00000561749 APCSP02743 223 aa15.62■□□□□ 0.09
SMPD3-202ENST00000561749 CKS2P33552 79 aa15.62■□□□□ 0.09
SMPD3-202ENST00000561749 UBE2L6O14933 153 aa15.61■□□□□ 0.09
SMPD3-202ENST00000561749 POLR2KP53803 58 aaKnown RBP15.61■□□□□ 0.09
SMPD3-202ENST00000561749 CLPSL2Q6UWE3 100 aa15.61■□□□□ 0.09
SMPD3-202ENST00000561749 SPATA12Q7Z6I5 190 aa15.61■□□□□ 0.09
SMPD3-202ENST00000561749 BTF3L4Q96K17 158 aa15.61■□□□□ 0.09
SMPD3-202ENST00000561749 C7orf77A4D0Y5 90 aa15.6■□□□□ 0.09
SMPD3-202ENST00000561749 D6R8Y8 96 aa15.6■□□□□ 0.09
SMPD3-202ENST00000561749 TSHBP01222 138 aa15.6■□□□□ 0.09
SMPD3-202ENST00000561749 CLRN3Q8NCR9 226 aa15.6■□□□□ 0.09
SMPD3-202ENST00000561749 IGKV2D-24A0A075B6R9 120 aa15.59■□□□□ 0.09
SMPD3-202ENST00000561749 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.59■□□□□ 0.09
SMPD3-202ENST00000561749 A0A087WTM6 91 aa15.59■□□□□ 0.09
SMPD3-202ENST00000561749 IGKV2-29A2NJV5 120 aaPredicted RBP15.59■□□□□ 0.09
SMPD3-202ENST00000561749 PPP1R17O96001 155 aa15.59■□□□□ 0.09
SMPD3-202ENST00000561749 CRPP02741 224 aa15.59■□□□□ 0.09
SMPD3-202ENST00000561749 SUMO2P61956 95 aaKnown RBP15.59■□□□□ 0.09
SMPD3-202ENST00000561749 ENHOQ6UWT2 76 aa15.59■□□□□ 0.09
SMPD3-202ENST00000561749 IMMP2LQ96T52 175 aa15.59■□□□□ 0.09
SMPD3-202ENST00000561749 TM2D2Q9BX73 214 aa15.59■□□□□ 0.09
SMPD3-202ENST00000561749 PKD1P98161 4303 aa15.59■□□□□ 0.09
SMPD3-202ENST00000561749 HECTD4Q9Y4D8 3996 aa15.58■□□□□ 0.09
SMPD3-202ENST00000561749 IGLV4-60A0A075B6I1 120 aa15.58■□□□□ 0.08
SMPD3-202ENST00000561749 FUSP35637 526 aaKnown RBP eCLIP15.58■□□□□ 0.08
SMPD3-202ENST00000561749 KRTAP10-2P60368 255 aa15.58■□□□□ 0.08
SMPD3-202ENST00000561749 TRBV27A0A0K0K1C4 114 aa15.57■□□□□ 0.08
SMPD3-202ENST00000561749 EREGO14944 169 aa15.57■□□□□ 0.08
SMPD3-202ENST00000561749 TNFRSF6BO95407 300 aa15.57■□□□□ 0.08
SMPD3-202ENST00000561749 LINC00269Q8N2A0 174 aa15.57■□□□□ 0.08
SMPD3-202ENST00000561749 C20orf203Q8NBC4 194 aa15.57■□□□□ 0.08
SMPD3-202ENST00000561749 RMI2Q96E14 147 aa15.57■□□□□ 0.08
SMPD3-202ENST00000561749 RPS10P5Q9NQ39 176 aa15.57■□□□□ 0.08
SMPD3-202ENST00000561749 VCYO14598 125 aa15.56■□□□□ 0.08
SMPD3-202ENST00000561749 NPYP01303 97 aa15.56■□□□□ 0.08
SMPD3-202ENST00000561749 APOC3P02656 99 aa15.56■□□□□ 0.08
SMPD3-202ENST00000561749 Q0VG73 95 aa15.56■□□□□ 0.08
SMPD3-202ENST00000561749 LRCOL1A6NCL2 159 aa15.55■□□□□ 0.08
SMPD3-202ENST00000561749 RHEBQ15382 184 aa15.55■□□□□ 0.08
SMPD3-202ENST00000561749 AMMECR1LQ6DCA0 310 aa15.54■□□□□ 0.08
SMPD3-202ENST00000561749 MAPKAPK5-AS1Q8N8E1 139 aa15.54■□□□□ 0.08
SMPD3-202ENST00000561749 TRBV24-1A0A075B6N3 115 aa15.53■□□□□ 0.08
SMPD3-202ENST00000561749 A0A1B0GUV1 79 aa15.53■□□□□ 0.08
SMPD3-202ENST00000561749 C16orf90A8MZG2 172 aa15.53■□□□□ 0.08
SMPD3-202ENST00000561749 LECT2O14960 151 aa15.53■□□□□ 0.08
SMPD3-202ENST00000561749 PPBPP02775 128 aa15.53■□□□□ 0.08
SMPD3-202ENST00000561749 S100PP25815 95 aa15.53■□□□□ 0.08
SMPD3-202ENST00000561749 FCER1GP30273 86 aa15.53■□□□□ 0.08
SMPD3-202ENST00000561749 WFDC2Q14508 124 aa15.53■□□□□ 0.08
SMPD3-202ENST00000561749 RNASEKQ6P5S7 137 aaKnown RBP15.53■□□□□ 0.08
SMPD3-202ENST00000561749 TMEM136Q6ZRR5 245 aa15.53■□□□□ 0.08
SMPD3-202ENST00000561749 ORMDL3Q8N138 153 aa15.53■□□□□ 0.08
SMPD3-202ENST00000561749 PRELID3AQ96N28 172 aa15.53■□□□□ 0.08
SMPD3-202ENST00000561749 C20orf78Q9BR46 151 aa15.53■□□□□ 0.08
SMPD3-202ENST00000561749 C1orf43Q9BWL3 253 aa15.53■□□□□ 0.08
SMPD3-202ENST00000561749 DNAH11Q96DT5 4516 aa15.53■□□□□ 0.08
SMPD3-202ENST00000561749 FGF6P10767 208 aa15.52■□□□□ 0.08
SMPD3-202ENST00000561749 ESDP10768 282 aa15.52■□□□□ 0.08
SMPD3-202ENST00000561749 REG3AQ06141 175 aa15.52■□□□□ 0.08
SMPD3-202ENST00000561749 BAALCQ8WXS3 180 aa15.52■□□□□ 0.08
SMPD3-202ENST00000561749 PRR34Q9NV39 138 aa15.52■□□□□ 0.08
SMPD3-202ENST00000561749 TRAV9-1A0A075B6T8 112 aa15.51■□□□□ 0.07
SMPD3-202ENST00000561749 NDUFA5Q16718 116 aa15.51■□□□□ 0.07
SMPD3-202ENST00000561749 KIR2DL4Q99706 377 aa15.51■□□□□ 0.07
SMPD3-202ENST00000561749 SMIM2Q9BVW6 85 aa15.51■□□□□ 0.07
SMPD3-202ENST00000561749 COX11Q9Y6N1 276 aa15.51■□□□□ 0.07
SMPD3-202ENST00000561749 H7C423 109 aa15.5■□□□□ 0.07
SMPD3-202ENST00000561749 MIAQ16674 131 aa15.5■□□□□ 0.07
SMPD3-202ENST00000561749 IGLV10-54A0A075B6I4 117 aa15.49■□□□□ 0.07
SMPD3-202ENST00000561749 IGKV3OR2-268A0A0C4DH90 116 aa15.48■□□□□ 0.07
SMPD3-202ENST00000561749 PHOX2AO14813 284 aa15.48■□□□□ 0.07
SMPD3-202ENST00000561749 RPL32P62910 135 aaKnown RBP15.48■□□□□ 0.07
SMPD3-202ENST00000561749 SLC7A5P1Q8MH63 180 aa15.48■□□□□ 0.07
SMPD3-202ENST00000561749 SVBPQ8N300 66 aa15.48■□□□□ 0.07
SMPD3-202ENST00000561749 SNAPINO95295 136 aa15.47■□□□□ 0.07
SMPD3-202ENST00000561749 HLA-DQA1P01909 254 aa15.47■□□□□ 0.07
SMPD3-202ENST00000561749 KIAA1644Q3SXP7 199 aa15.46■□□□□ 0.07
SMPD3-202ENST00000561749 Q8N814 137 aa15.46■□□□□ 0.07
SMPD3-202ENST00000561749 DYNC1H1Q14204 4646 aaKnown RBP15.46■□□□□ 0.06
SMPD3-202ENST00000561749 LOC389332A0A1B0GUA5 103 aa15.45■□□□□ 0.06
SMPD3-202ENST00000561749 TCAPO15273 167 aa15.45■□□□□ 0.06
SMPD3-202ENST00000561749 TMEM101Q96IK0 257 aa15.45■□□□□ 0.06
SMPD3-202ENST00000561749 PKHD1P08F94 4074 aa15.44■□□□□ 0.06
SMPD3-202ENST00000561749 ZNF25P17030 456 aaPredicted RBP15.44■□□□□ 0.06
SMPD3-202ENST00000561749 OR5A1Q8NGJ0 315 aa15.44■□□□□ 0.06
SMPD3-202ENST00000561749 PGPEP1Q9NXJ5 209 aa15.44■□□□□ 0.06
SMPD3-202ENST00000561749 KRTAP26-1Q6PEX3 210 aa15.43■□□□□ 0.06
SMPD3-202ENST00000561749 MAP1LC3AQ9H492 121 aa15.43■□□□□ 0.06
SMPD3-202ENST00000561749 LAMTOR2Q9Y2Q5 125 aa15.43■□□□□ 0.06
SMPD3-202ENST00000561749 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.41■□□□□ 0.06
SMPD3-202ENST00000561749 TGIF2-C20orf24A0A0A6YYL0 155 aa15.41■□□□□ 0.06
SMPD3-202ENST00000561749 CDPF1Q6NVV7 123 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms