RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 SERTAD4-AS1Q5TG53 156 aa7.8□□□□□ -1.16
CARMIL3-204ENST00000561354 OR2D3Q8NGH3 330 aa7.8□□□□□ -1.16
CARMIL3-204ENST00000561354 BORCS7Q96B45 105 aa7.8□□□□□ -1.16
CARMIL3-204ENST00000561354 COX11Q9Y6N1 276 aa7.8□□□□□ -1.16
CARMIL3-204ENST00000561354 LECT2O14960 151 aa7.79□□□□□ -1.16
CARMIL3-204ENST00000561354 APCSP02743 223 aa7.79□□□□□ -1.16
CARMIL3-204ENST00000561354 LINC00694P0DN24 101 aa7.79□□□□□ -1.16
CARMIL3-204ENST00000561354 RNASE3P12724 160 aaKnown RBP7.79□□□□□ -1.16
CARMIL3-204ENST00000561354 RAB4BP61018 213 aa7.79□□□□□ -1.16
CARMIL3-204ENST00000561354 PIK3CD-AS1Q5SR53 167 aa7.79□□□□□ -1.16
CARMIL3-204ENST00000561354 MRPL54Q6P161 138 aaKnown RBP7.79□□□□□ -1.16
CARMIL3-204ENST00000561354 ZFP2Q6ZN57 461 aa7.79□□□□□ -1.16
CARMIL3-204ENST00000561354 Q8N3U1 123 aa7.79□□□□□ -1.16
CARMIL3-204ENST00000561354 TMEM18Q96B42 140 aa7.79□□□□□ -1.16
CARMIL3-204ENST00000561354 PACRGQ96M98 296 aaPredicted RBP7.79□□□□□ -1.16
CARMIL3-204ENST00000561354 C12orf57Q99622 126 aa7.79□□□□□ -1.16
CARMIL3-204ENST00000561354 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.78□□□□□ -1.16
CARMIL3-204ENST00000561354 A8MWV9 139 aa7.78□□□□□ -1.16
CARMIL3-204ENST00000561354 ESDP10768 282 aa7.78□□□□□ -1.16
CARMIL3-204ENST00000561354 RIGQ13278 110 aa7.78□□□□□ -1.16
CARMIL3-204ENST00000561354 SCXQ7RTU7 201 aa7.78□□□□□ -1.16
CARMIL3-204ENST00000561354 DAZ4Q86SG3 579 aaKnown RBP7.78□□□□□ -1.16
CARMIL3-204ENST00000561354 GATD1Q8NB37 220 aa7.78□□□□□ -1.16
CARMIL3-204ENST00000561354 BAALCQ8WXS3 180 aa7.78□□□□□ -1.16
CARMIL3-204ENST00000561354 HIST1H2BLQ99880 126 aa7.78□□□□□ -1.16
CARMIL3-204ENST00000561354 DAZ3Q9NR90 486 aaKnown RBP7.78□□□□□ -1.16
CARMIL3-204ENST00000561354 A0A1B0GUT8 65 aa7.77□□□□□ -1.17
CARMIL3-204ENST00000561354 GAGE12JA6NER3 117 aa7.77□□□□□ -1.17
CARMIL3-204ENST00000561354 IFITM10A6NMD0 228 aa7.77□□□□□ -1.17
CARMIL3-204ENST00000561354 SH2D1AO60880 128 aa7.77□□□□□ -1.17
CARMIL3-204ENST00000561354 KRTAP10-4P60372 401 aaPredicted RBP7.77□□□□□ -1.17
CARMIL3-204ENST00000561354 GAGE1Q13065 139 aa7.77□□□□□ -1.17
CARMIL3-204ENST00000561354 GAGE4Q13068 117 aa7.77□□□□□ -1.17
CARMIL3-204ENST00000561354 GAGE5Q13069 117 aa7.77□□□□□ -1.17
CARMIL3-204ENST00000561354 GAGE13Q4V321 117 aa7.77□□□□□ -1.17
CARMIL3-204ENST00000561354 Q8N976 141 aa7.77□□□□□ -1.17
CARMIL3-204ENST00000561354 SYT8Q8NBV8 401 aa7.77□□□□□ -1.17
CARMIL3-204ENST00000561354 GTSF1Q8WW33 167 aa7.77□□□□□ -1.17
CARMIL3-204ENST00000561354 RMI2Q96E14 147 aa7.77□□□□□ -1.17
CARMIL3-204ENST00000561354 KRTAP3-3Q9BYR6 98 aa7.77□□□□□ -1.17
CARMIL3-204ENST00000561354 KRTAP3-2Q9BYR7 98 aa7.77□□□□□ -1.17
CARMIL3-204ENST00000561354 FABP5P3A8MUU1 101 aa7.76□□□□□ -1.17
CARMIL3-204ENST00000561354 OXTP01178 125 aa7.76□□□□□ -1.17
CARMIL3-204ENST00000561354 FABP4P15090 132 aa7.76□□□□□ -1.17
CARMIL3-204ENST00000561354 S100A12P80511 92 aa7.76□□□□□ -1.17
CARMIL3-204ENST00000561354 LINC01620Q4KN68 170 aa7.76□□□□□ -1.17
CARMIL3-204ENST00000561354 CHAC1Q9BUX1 264 aa7.76□□□□□ -1.17
CARMIL3-204ENST00000561354 CTRLP40313 264 aa7.75□□□□□ -1.17
CARMIL3-204ENST00000561354 CRIP1P50238 77 aa7.75□□□□□ -1.17
CARMIL3-204ENST00000561354 LINC01559Q495D7 138 aa7.75□□□□□ -1.17
CARMIL3-204ENST00000561354 BAGE3Q86Y29 109 aa7.75□□□□□ -1.17
CARMIL3-204ENST00000561354 OR10D4PQ8NGN7 298 aa7.75□□□□□ -1.17
CARMIL3-204ENST00000561354 PGLYRP4Q96LB8 373 aa7.75□□□□□ -1.17
CARMIL3-204ENST00000561354 Q9UF83 564 aa7.75□□□□□ -1.17
CARMIL3-204ENST00000561354 IGKV3D-20A0A0C4DH25 116 aa7.74□□□□□ -1.17
CARMIL3-204ENST00000561354 CAMPP49913 170 aa7.74□□□□□ -1.17
CARMIL3-204ENST00000561354 PDZD11Q5EBL8 140 aa7.74□□□□□ -1.17
CARMIL3-204ENST00000561354 UFSP1Q6NVU6 142 aa7.74□□□□□ -1.17
CARMIL3-204ENST00000561354 NIT1Q86X76 327 aa7.74□□□□□ -1.17
CARMIL3-204ENST00000561354 CIRBP-AS1Q8TBR5 109 aa7.74□□□□□ -1.17
CARMIL3-204ENST00000561354 SAMD10Q9BYL1 202 aa7.74□□□□□ -1.17
CARMIL3-204ENST00000561354 IGKV2D-24A0A075B6R9 120 aa7.73□□□□□ -1.17
CARMIL3-204ENST00000561354 F2Z2F3 143 aa7.73□□□□□ -1.17
CARMIL3-204ENST00000561354 S100A4P26447 101 aaKnown RBP7.73□□□□□ -1.17
CARMIL3-204ENST00000561354 C14orf178Q8N769 122 aaPredicted RBP7.73□□□□□ -1.17
CARMIL3-204ENST00000561354 CHCHD7Q9BUK0 85 aa7.73□□□□□ -1.17
CARMIL3-204ENST00000561354 CNFNQ9BYD5 112 aa7.73□□□□□ -1.17
CARMIL3-204ENST00000561354 GRIFINA4D1Z8 144 aa7.72□□□□□ -1.17
CARMIL3-204ENST00000561354 RHODO00212 210 aa7.72□□□□□ -1.17
CARMIL3-204ENST00000561354 SERF1AO75920 110 aa7.72□□□□□ -1.17
CARMIL3-204ENST00000561354 IGLC6P0CF74 106 aa7.72□□□□□ -1.17
CARMIL3-204ENST00000561354 ASIPP42127 132 aa7.72□□□□□ -1.17
CARMIL3-204ENST00000561354 JOSD1Q15040 202 aaPredicted RBP7.72□□□□□ -1.17
CARMIL3-204ENST00000561354 FER1L6-AS1Q8NA97 138 aa7.72□□□□□ -1.17
CARMIL3-204ENST00000561354 DNAJC30Q96LL9 226 aa7.72□□□□□ -1.17
CARMIL3-204ENST00000561354 ALKBH7Q9BT30 221 aaPredicted RBP7.72□□□□□ -1.17
CARMIL3-204ENST00000561354 JPT2Q9H910 190 aa7.72□□□□□ -1.17
CARMIL3-204ENST00000561354 KLK12Q9UKR0 248 aa7.72□□□□□ -1.17
CARMIL3-204ENST00000561354 HMCN2Q8NDA2 5059 aa7.71□□□□□ -1.18
CARMIL3-204ENST00000561354 ARMS2P0C7Q2 107 aa7.71□□□□□ -1.18
CARMIL3-204ENST00000561354 GZMBP10144 247 aa7.71□□□□□ -1.18
CARMIL3-204ENST00000561354 PYY3Q5JQD4 70 aa7.71□□□□□ -1.18
CARMIL3-204ENST00000561354 C18orf32Q8TCD1 76 aa7.71□□□□□ -1.18
CARMIL3-204ENST00000561354 UBE2WQ96B02 151 aa7.71□□□□□ -1.18
CARMIL3-204ENST00000561354 NIT2Q9NQR4 276 aa7.71□□□□□ -1.18
CARMIL3-204ENST00000561354 LRP1Q07954 4544 aaKnown RBP7.71□□□□□ -1.18
CARMIL3-204ENST00000561354 A0A087WX48 190 aa7.7□□□□□ -1.18
CARMIL3-204ENST00000561354 RAB4AP20338 218 aa7.7□□□□□ -1.18
CARMIL3-204ENST00000561354 C14orf177Q52M58 125 aa7.7□□□□□ -1.18
CARMIL3-204ENST00000561354 LYZL1Q6UWQ5 148 aa7.7□□□□□ -1.18
CARMIL3-204ENST00000561354 CHCHD1Q96BP2 118 aaKnown RBP7.7□□□□□ -1.18
CARMIL3-204ENST00000561354 PLA2G2DQ9UNK4 145 aa7.7□□□□□ -1.18
CARMIL3-204ENST00000561354 H3BVH4 76 aa7.69□□□□□ -1.18
CARMIL3-204ENST00000561354 PMCHP20382 165 aa7.69□□□□□ -1.18
CARMIL3-204ENST00000561354 CACNG7P62955 275 aa7.69□□□□□ -1.18
CARMIL3-204ENST00000561354 IQCJQ1A5X6 159 aa7.69□□□□□ -1.18
CARMIL3-204ENST00000561354 KIAA1644Q3SXP7 199 aa7.69□□□□□ -1.18
CARMIL3-204ENST00000561354 TPPP3Q9BW30 176 aa7.69□□□□□ -1.18
CARMIL3-204ENST00000561354 SSBP4Q9BWG4 385 aaPredicted RBP7.69□□□□□ -1.18
CARMIL3-204ENST00000561354 UBR4Q5T4S7 5183 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms