RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 Q0VG73 95 aa13.24□□□□□ -0.29
TSPAN3-210ENST00000561277 UQCC3Q6UW78 93 aa13.24□□□□□ -0.29
TSPAN3-210ENST00000561277 ENHOQ6UWT2 76 aa13.24□□□□□ -0.29
TSPAN3-210ENST00000561277 PGPEP1Q9NXJ5 209 aa13.24□□□□□ -0.29
TSPAN3-210ENST00000561277 DNAH5Q8TE73 4624 aa13.23□□□□□ -0.29
TSPAN3-210ENST00000561277 LRP1BQ9NZR2 4599 aa13.23□□□□□ -0.29
TSPAN3-210ENST00000561277 TRBV6-5A0A0K0K1A5 114 aa13.23□□□□□ -0.29
TSPAN3-210ENST00000561277 LECT2O14960 151 aa13.23□□□□□ -0.29
TSPAN3-210ENST00000561277 MT-ND4LP03901 98 aa13.23□□□□□ -0.29
TSPAN3-210ENST00000561277 ST20Q9HBF5 79 aa13.23□□□□□ -0.29
TSPAN3-210ENST00000561277 COX11Q9Y6N1 276 aa13.23□□□□□ -0.29
TSPAN3-210ENST00000561277 HERC2O95714 4834 aa13.22□□□□□ -0.29
TSPAN3-210ENST00000561277 A0A1B0GW15 77 aa13.22□□□□□ -0.29
TSPAN3-210ENST00000561277 ADCYAP1P18509 176 aa13.22□□□□□ -0.29
TSPAN3-210ENST00000561277 PMCHP20382 165 aa13.22□□□□□ -0.29
TSPAN3-210ENST00000561277 HBBP68871 147 aa13.22□□□□□ -0.29
TSPAN3-210ENST00000561277 WFDC2Q14508 124 aa13.22□□□□□ -0.29
TSPAN3-210ENST00000561277 LINC00269Q8N2A0 174 aa13.22□□□□□ -0.29
TSPAN3-210ENST00000561277 MAPKAPK5-AS1Q8N8E1 139 aa13.22□□□□□ -0.29
TSPAN3-210ENST00000561277 C1orf43Q9BWL3 253 aa13.22□□□□□ -0.29
TSPAN3-210ENST00000561277 APCSP02743 223 aa13.21□□□□□ -0.29
TSPAN3-210ENST00000561277 FAM104BQ5XKR9 115 aa13.21□□□□□ -0.29
TSPAN3-210ENST00000561277 CDPF1Q6NVV7 123 aa13.21□□□□□ -0.29
TSPAN3-210ENST00000561277 COMMD7Q86VX2 200 aa13.21□□□□□ -0.29
TSPAN3-210ENST00000561277 Q8N814 137 aa13.21□□□□□ -0.29
TSPAN3-210ENST00000561277 TMEM70Q9BUB7 260 aa13.21□□□□□ -0.29
TSPAN3-210ENST00000561277 TMEM218A2RU14 115 aa13.2□□□□□ -0.3
TSPAN3-210ENST00000561277 F8W036 122 aa13.2□□□□□ -0.3
TSPAN3-210ENST00000561277 I3L3M4 83 aa13.2□□□□□ -0.3
TSPAN3-210ENST00000561277 MRPL51Q4U2R6 128 aaKnown RBP13.2□□□□□ -0.3
TSPAN3-210ENST00000561277 BAALCQ8WXS3 180 aa13.2□□□□□ -0.3
TSPAN3-210ENST00000561277 ANAPC16Q96DE5 110 aa13.2□□□□□ -0.3
TSPAN3-210ENST00000561277 IGLV4-60A0A075B6I1 120 aa13.2□□□□□ -0.3
TSPAN3-210ENST00000561277 A0A1B0GXF2 115 aa13.2□□□□□ -0.3
TSPAN3-210ENST00000561277 S100A8P05109 93 aa13.2□□□□□ -0.3
TSPAN3-210ENST00000561277 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.19□□□□□ -0.3
TSPAN3-210ENST00000561277 IGKV2-29A2NJV5 120 aaPredicted RBP13.19□□□□□ -0.3
TSPAN3-210ENST00000561277 C20orf203Q8NBC4 194 aa13.19□□□□□ -0.3
TSPAN3-210ENST00000561277 PRR34Q9NV39 138 aa13.19□□□□□ -0.3
TSPAN3-210ENST00000561277 TMEM242Q9NWH2 141 aa13.19□□□□□ -0.3
TSPAN3-210ENST00000561277 MIAQ16674 131 aa13.18□□□□□ -0.3
TSPAN3-210ENST00000561277 NRACQ8N912 160 aa13.18□□□□□ -0.3
TSPAN3-210ENST00000561277 A0A1B0GUV1 79 aa13.17□□□□□ -0.3
TSPAN3-210ENST00000561277 TSHBP01222 138 aa13.17□□□□□ -0.3
TSPAN3-210ENST00000561277 REG3AQ06141 175 aa13.17□□□□□ -0.3
TSPAN3-210ENST00000561277 ATP5L2Q7Z4Y8 100 aa13.17□□□□□ -0.3
TSPAN3-210ENST00000561277 IGLV5-52A0A0A0MRZ9 124 aa13.16□□□□□ -0.3
TSPAN3-210ENST00000561277 PPP1R17O96001 155 aa13.16□□□□□ -0.3
TSPAN3-210ENST00000561277 CKS2P33552 79 aa13.16□□□□□ -0.3
TSPAN3-210ENST00000561277 POLR2KP53803 58 aaKnown RBP13.16□□□□□ -0.3
TSPAN3-210ENST00000561277 AMMECR1LQ6DCA0 310 aa13.16□□□□□ -0.3
TSPAN3-210ENST00000561277 RYR1P21817 5038 aa13.16□□□□□ -0.3
TSPAN3-210ENST00000561277 TRBV27A0A0K0K1C4 114 aa13.15□□□□□ -0.3
TSPAN3-210ENST00000561277 HLA-DQA1P01909 254 aa13.15□□□□□ -0.3
TSPAN3-210ENST00000561277 SUMO2P61956 95 aaKnown RBP13.15□□□□□ -0.3
TSPAN3-210ENST00000561277 IGLV10-54A0A075B6I4 117 aa13.15□□□□□ -0.3
TSPAN3-210ENST00000561277 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.15□□□□□ -0.3
TSPAN3-210ENST00000561277 LINC00862A6NCI5 91 aa13.15□□□□□ -0.3
TSPAN3-210ENST00000561277 RNASEKQ6P5S7 137 aaKnown RBP13.15□□□□□ -0.3
TSPAN3-210ENST00000561277 NTN5Q8WTR8 489 aaPredicted RBP13.15□□□□□ -0.3
TSPAN3-210ENST00000561277 D6R8Y8 96 aa13.14□□□□□ -0.31
TSPAN3-210ENST00000561277 SEC11CQ9BY50 192 aa13.14□□□□□ -0.31
TSPAN3-210ENST00000561277 VCYO14598 125 aa13.13□□□□□ -0.31
TSPAN3-210ENST00000561277 CDK2AP2O75956 126 aa13.13□□□□□ -0.31
TSPAN3-210ENST00000561277 FGF6P10767 208 aa13.13□□□□□ -0.31
TSPAN3-210ENST00000561277 FCER1GP30273 86 aa13.13□□□□□ -0.31
TSPAN3-210ENST00000561277 H7C423 109 aa13.12□□□□□ -0.31
TSPAN3-210ENST00000561277 GCSHP23434 173 aa13.12□□□□□ -0.31
TSPAN3-210ENST00000561277 APOBP04114 4563 aaKnown RBP13.11□□□□□ -0.31
TSPAN3-210ENST00000561277 IGKV3OR2-268A0A0C4DH90 116 aa13.11□□□□□ -0.31
TSPAN3-210ENST00000561277 ESDP10768 282 aa13.11□□□□□ -0.31
TSPAN3-210ENST00000561277 KRTAP10-1P60331 282 aa13.11□□□□□ -0.31
TSPAN3-210ENST00000561277 KIR2DL4Q99706 377 aa13.11□□□□□ -0.31
TSPAN3-210ENST00000561277 TNFRSF6BO95407 300 aa13.11□□□□□ -0.31
TSPAN3-210ENST00000561277 BTF3L4Q96K17 158 aa13.11□□□□□ -0.31
TSPAN3-210ENST00000561277 HSPG2P98160 4391 aa13.1□□□□□ -0.31
TSPAN3-210ENST00000561277 TRBV24-1A0A075B6N3 115 aa13.1□□□□□ -0.31
TSPAN3-210ENST00000561277 C7orf77A4D0Y5 90 aa13.1□□□□□ -0.31
TSPAN3-210ENST00000561277 C20orf78Q9BR46 151 aa13.1□□□□□ -0.31
TSPAN3-210ENST00000561277 NPYP01303 97 aa13.09□□□□□ -0.31
TSPAN3-210ENST00000561277 KRTAP26-1Q6PEX3 210 aa13.09□□□□□ -0.31
TSPAN3-210ENST00000561277 TRAV8-4A0A0B4J246 113 aa13.08□□□□□ -0.32
TSPAN3-210ENST00000561277 PPBPP02775 128 aa13.08□□□□□ -0.32
TSPAN3-210ENST00000561277 ZNF25P17030 456 aaPredicted RBP13.08□□□□□ -0.32
TSPAN3-210ENST00000561277 ORMDL3Q8N138 153 aa13.08□□□□□ -0.32
TSPAN3-210ENST00000561277 TMEM101Q96IK0 257 aa13.08□□□□□ -0.32
TSPAN3-210ENST00000561277 CTDSP1Q9GZU7 261 aa13.08□□□□□ -0.32
TSPAN3-210ENST00000561277 USP17L23D6RBM5 183 aa13.07□□□□□ -0.32
TSPAN3-210ENST00000561277 TMEM136Q6ZRR5 245 aa13.07□□□□□ -0.32
TSPAN3-210ENST00000561277 OR5A1Q8NGJ0 315 aa13.07□□□□□ -0.32
TSPAN3-210ENST00000561277 PRELID3AQ96N28 172 aa13.07□□□□□ -0.32
TSPAN3-210ENST00000561277 IMMP2LQ96T52 175 aa13.07□□□□□ -0.32
TSPAN3-210ENST00000561277 SMIM2Q9BVW6 85 aa13.07□□□□□ -0.32
TSPAN3-210ENST00000561277 C14orf177Q52M58 125 aa13.06□□□□□ -0.32
TSPAN3-210ENST00000561277 RPL32P62910 135 aaKnown RBP13.05□□□□□ -0.32
TSPAN3-210ENST00000561277 PHOX2AO14813 284 aa13.04□□□□□ -0.32
TSPAN3-210ENST00000561277 C10orf91Q5T1B1 145 aa13.04□□□□□ -0.32
TSPAN3-210ENST00000561277 MRPL52Q86TS9 123 aaKnown RBP13.04□□□□□ -0.32
TSPAN3-210ENST00000561277 CARHSP1Q9Y2V2 147 aaKnown RBP13.04□□□□□ -0.32
TSPAN3-210ENST00000561277 LINC01620Q4KN68 170 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms