RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 SERTAD4-AS1Q5TG53 156 aa17.31■□□□□ 0.36
SNRPA1-215ENST00000561187 CLRN3Q8NCR9 226 aa17.31■□□□□ 0.36
SNRPA1-215ENST00000561187 COTL1Q14019 142 aa17.3■□□□□ 0.36
SNRPA1-215ENST00000561187 EIF5AL1Q6IS14 154 aaKnown RBP17.3■□□□□ 0.36
SNRPA1-215ENST00000561187 SMIM12Q96EX1 92 aa17.3■□□□□ 0.36
SNRPA1-215ENST00000561187 TRAV8-4A0A0B4J246 113 aa17.29■□□□□ 0.36
SNRPA1-215ENST00000561187 TWIST1Q15672 202 aa17.29■□□□□ 0.36
SNRPA1-215ENST00000561187 NUDT10Q8NFP7 164 aa17.29■□□□□ 0.36
SNRPA1-215ENST00000561187 NUDT11Q96G61 164 aa17.29■□□□□ 0.36
SNRPA1-215ENST00000561187 AP5S1Q9NUS5 200 aa17.29■□□□□ 0.36
SNRPA1-215ENST00000561187 A0A1B0GUV1 79 aa17.28■□□□□ 0.36
SNRPA1-215ENST00000561187 CTRLP40313 264 aa17.28■□□□□ 0.36
SNRPA1-215ENST00000561187 CNBPP62633 177 aaKnown RBP17.28■□□□□ 0.36
SNRPA1-215ENST00000561187 PGLYRP4Q96LB8 373 aa17.28■□□□□ 0.36
SNRPA1-215ENST00000561187 RNASE7Q9H1E1 156 aaKnown RBP17.28■□□□□ 0.36
SNRPA1-215ENST00000561187 SLPIP03973 132 aa17.27■□□□□ 0.36
SNRPA1-215ENST00000561187 WDR73Q6P4I2 378 aa17.27■□□□□ 0.36
SNRPA1-215ENST00000561187 DPH3Q96FX2 82 aa17.27■□□□□ 0.36
SNRPA1-215ENST00000561187 BIN3Q9NQY0 253 aa17.26■□□□□ 0.35
SNRPA1-215ENST00000561187 IGHV3-64A0A075B6Q5 118 aa17.25■□□□□ 0.35
SNRPA1-215ENST00000561187 GAGE12HA6NDE8 117 aa17.25■□□□□ 0.35
SNRPA1-215ENST00000561187 C9orf62Q8N4C0 152 aa17.25■□□□□ 0.35
SNRPA1-215ENST00000561187 GATD1Q8NB37 220 aa17.25■□□□□ 0.35
SNRPA1-215ENST00000561187 RPL39LQ96EH5 51 aaKnown RBP17.25■□□□□ 0.35
SNRPA1-215ENST00000561187 RPP21Q9H633 154 aaKnown RBP17.25■□□□□ 0.35
SNRPA1-215ENST00000561187 PLA2G2DQ9UNK4 145 aa17.25■□□□□ 0.35
SNRPA1-215ENST00000561187 UBR4Q5T4S7 5183 aa17.24■□□□□ 0.35
SNRPA1-215ENST00000561187 K7EN84 100 aa17.24■□□□□ 0.35
SNRPA1-215ENST00000561187 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.23■□□□□ 0.35
SNRPA1-215ENST00000561187 HIGD2BQ4VC39 106 aa17.23■□□□□ 0.35
SNRPA1-215ENST00000561187 Q6ZNX1 250 aa17.23■□□□□ 0.35
SNRPA1-215ENST00000561187 IGKV2D-29A0A075B6S2 120 aaPredicted RBP17.22■□□□□ 0.35
SNRPA1-215ENST00000561187 IGKV2-29A2NJV5 120 aaPredicted RBP17.22■□□□□ 0.35
SNRPA1-215ENST00000561187 FOXA3P55318 350 aaPredicted RBP17.22■□□□□ 0.35
SNRPA1-215ENST00000561187 C15orf56Q8N910 161 aa17.22■□□□□ 0.35
SNRPA1-215ENST00000561187 A0A087WYN8 130 aa17.21■□□□□ 0.35
SNRPA1-215ENST00000561187 CIRBPQ14011 172 aaKnown RBP17.21■□□□□ 0.35
SNRPA1-215ENST00000561187 AMMECR1LQ6DCA0 310 aa17.2■□□□□ 0.34
SNRPA1-215ENST00000561187 RNASEKQ6P5S7 137 aaKnown RBP17.2■□□□□ 0.34
SNRPA1-215ENST00000561187 OCC1Q8TAD7 63 aa17.2■□□□□ 0.34
SNRPA1-215ENST00000561187 SPACA4Q8TDM5 124 aa17.19■□□□□ 0.34
SNRPA1-215ENST00000561187 CNFNQ9BYD5 112 aa17.19■□□□□ 0.34
SNRPA1-215ENST00000561187 SLC51BQ86UW2 128 aa17.18■□□□□ 0.34
SNRPA1-215ENST00000561187 GTSF1Q8WW33 167 aa17.18■□□□□ 0.34
SNRPA1-215ENST00000561187 APCSP02743 223 aa17.16■□□□□ 0.34
SNRPA1-215ENST00000561187 CHCHD10Q8WYQ3 142 aaPredicted RBP17.16■□□□□ 0.34
SNRPA1-215ENST00000561187 COX6A2Q02221 97 aa17.15■□□□□ 0.34
SNRPA1-215ENST00000561187 SMIM15Q7Z3B0 74 aa17.15■□□□□ 0.34
SNRPA1-215ENST00000561187 TCTE3Q8IZS6 198 aa17.15■□□□□ 0.34
SNRPA1-215ENST00000561187 IGKV2-24A0A0C4DH68 120 aa17.14■□□□□ 0.33
SNRPA1-215ENST00000561187 CEBPGP53567 150 aa17.14■□□□□ 0.33
SNRPA1-215ENST00000561187 PHOX2AO14813 284 aa17.13■□□□□ 0.33
SNRPA1-215ENST00000561187 MT1HL1P0DM35 61 aa17.13■□□□□ 0.33
SNRPA1-215ENST00000561187 CFAP161Q6P656 301 aa17.13■□□□□ 0.33
SNRPA1-215ENST00000561187 SDHAF1A6NFY7 115 aa17.12■□□□□ 0.33
SNRPA1-215ENST00000561187 GATCO43716 136 aaKnown RBP17.12■□□□□ 0.33
SNRPA1-215ENST00000561187 FGF6P10767 208 aa17.12■□□□□ 0.33
SNRPA1-215ENST00000561187 PRSS3P2Q8NHM4 247 aa17.12■□□□□ 0.33
SNRPA1-215ENST00000561187 TAGLN2P37802 199 aaKnown RBP17.11■□□□□ 0.33
SNRPA1-215ENST00000561187 RPS10P46783 165 aaKnown RBP17.11■□□□□ 0.33
SNRPA1-215ENST00000561187 MAJINQ3KP22 176 aa17.11■□□□□ 0.33
SNRPA1-215ENST00000561187 RNF185Q96GF1 192 aa17.11■□□□□ 0.33
SNRPA1-215ENST00000561187 GAS8-AS1O95177 125 aa17.09■□□□□ 0.33
SNRPA1-215ENST00000561187 NCR2O95944 276 aa17.09■□□□□ 0.33
SNRPA1-215ENST00000561187 Q6ZRU5 148 aa17.09■□□□□ 0.33
SNRPA1-215ENST00000561187 PLAC8Q9NZF1 115 aa17.09■□□□□ 0.33
SNRPA1-215ENST00000561187 XCL1P47992 114 aa17.08■□□□□ 0.32
SNRPA1-215ENST00000561187 ALKAL2Q6UX46 152 aa17.08■□□□□ 0.32
SNRPA1-215ENST00000561187 NDUFS6O75380 124 aaKnown RBP17.07■□□□□ 0.32
SNRPA1-215ENST00000561187 PMCHP20382 165 aa17.07■□□□□ 0.32
SNRPA1-215ENST00000561187 LYPD6BQ8NI32 183 aa17.07■□□□□ 0.32
SNRPA1-215ENST00000561187 C7orf33Q8WU49 177 aa17.07■□□□□ 0.32
SNRPA1-215ENST00000561187 LINC00526Q96FQ7 95 aa17.07■□□□□ 0.32
SNRPA1-215ENST00000561187 TMEM242Q9NWH2 141 aa17.07■□□□□ 0.32
SNRPA1-215ENST00000561187 FOXI1Q12951 378 aa17.06■□□□□ 0.32
SNRPA1-215ENST00000561187 GVQW2A0A096LPI5 108 aaPredicted RBP17.04■□□□□ 0.32
SNRPA1-215ENST00000561187 FAM231BA6NCW3 169 aa17.04■□□□□ 0.32
SNRPA1-215ENST00000561187 A8MWL6 223 aa17.04■□□□□ 0.32
SNRPA1-215ENST00000561187 I3L3M4 83 aa17.04■□□□□ 0.32
SNRPA1-215ENST00000561187 TEX261Q6UWH6 196 aa17.04■□□□□ 0.32
SNRPA1-215ENST00000561187 STPG4Q8N801 248 aa17.04■□□□□ 0.32
SNRPA1-215ENST00000561187 TNXBP22105 4242 aa17.04■□□□□ 0.32
SNRPA1-215ENST00000561187 A0A096LNI7 61 aa17.03■□□□□ 0.32
SNRPA1-215ENST00000561187 TMEM250H0YL14 139 aa17.03■□□□□ 0.32
SNRPA1-215ENST00000561187 H7C423 109 aa17.03■□□□□ 0.32
SNRPA1-215ENST00000561187 CCL25O15444 150 aa17.03■□□□□ 0.32
SNRPA1-215ENST00000561187 OR5A1Q8NGJ0 315 aa17.03■□□□□ 0.32
SNRPA1-215ENST00000561187 TMEM101Q96IK0 257 aa17.03■□□□□ 0.32
SNRPA1-215ENST00000561187 BTF3L4Q96K17 158 aa17.03■□□□□ 0.32
SNRPA1-215ENST00000561187 TSHBP01222 138 aa17.02■□□□□ 0.32
SNRPA1-215ENST00000561187 FAM231DQ6ZW35 169 aa17.02■□□□□ 0.32
SNRPA1-215ENST00000561187 BORCS7Q96B45 105 aa17.02■□□□□ 0.32
SNRPA1-215ENST00000561187 ST20Q9HBF5 79 aa17.01■□□□□ 0.31
SNRPA1-215ENST00000561187 hCG_2014768A0A024R1R8 64 aa17■□□□□ 0.31
SNRPA1-215ENST00000561187 LINC00959A0A1B0GUT2 108 aa17■□□□□ 0.31
SNRPA1-215ENST00000561187 ZNF25P17030 456 aaPredicted RBP17■□□□□ 0.31
SNRPA1-215ENST00000561187 BLOC1S1P78537 153 aa16.99■□□□□ 0.31
SNRPA1-215ENST00000561187 MRAP2Q96G30 205 aa16.99■□□□□ 0.31
SNRPA1-215ENST00000561187 TRBV6-5A0A0K0K1A5 114 aa16.98■□□□□ 0.31
SNRPA1-215ENST00000561187 HIGD1CA8MV81 97 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms