RNA–Protein interactions for RNA: ENST00000560927.1

CRTC3-210, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 2

Gene CRTC3, Length 2,463 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-210ENST00000560927 TMEM238LA0A1B0GVL6 79 aa10.6□□□□□ -0.71
CRTC3-210ENST00000560927 A6NJY4 79 aa10.6□□□□□ -0.71
CRTC3-210ENST00000560927 RHODO00212 210 aa10.6□□□□□ -0.71
CRTC3-210ENST00000560927 LGALS3P17931 250 aaKnown RBP10.6□□□□□ -0.71
CRTC3-210ENST00000560927 RPL24P83731 157 aaKnown RBP10.6□□□□□ -0.71
CRTC3-210ENST00000560927 TMEM86BQ8N661 226 aa10.6□□□□□ -0.71
CRTC3-210ENST00000560927 SLC25A29Q8N8R3 303 aa10.6□□□□□ -0.71
CRTC3-210ENST00000560927 XCL2Q9UBD3 114 aa10.6□□□□□ -0.71
CRTC3-210ENST00000560927 TEX48A0A1B0GUV7 120 aa10.6□□□□□ -0.71
CRTC3-210ENST00000560927 APOMO95445 188 aa10.6□□□□□ -0.71
CRTC3-210ENST00000560927 IGHV3-30P01768 117 aa10.6□□□□□ -0.71
CRTC3-210ENST00000560927 IGHV3-30-5P0DP03 117 aa10.6□□□□□ -0.71
CRTC3-210ENST00000560927 AZU1P20160 251 aa10.6□□□□□ -0.71
CRTC3-210ENST00000560927 SFTA2Q6UW10 78 aa10.6□□□□□ -0.71
CRTC3-210ENST00000560927 INSP01308 110 aa10.59□□□□□ -0.71
CRTC3-210ENST00000560927 SPANXB1Q9NS25 103 aaPredicted RBP10.59□□□□□ -0.71
CRTC3-210ENST00000560927 NIPBLQ6KC79 2804 aaeCLIP10.59□□□□□ -0.71
CRTC3-210ENST00000560927 SETD2Q9BYW2 2564 aaPredicted RBP10.58□□□□□ -0.72
CRTC3-210ENST00000560927 IGHV3-38A0A0C4DH36 116 aa10.58□□□□□ -0.72
CRTC3-210ENST00000560927 LEPROTO15243 131 aa10.58□□□□□ -0.72
CRTC3-210ENST00000560927 TSPAN13O95857 204 aa10.58□□□□□ -0.72
CRTC3-210ENST00000560927 PIK3CD-AS1Q5SR53 167 aa10.58□□□□□ -0.72
CRTC3-210ENST00000560927 SVIPQ8NHG7 77 aa10.58□□□□□ -0.72
CRTC3-210ENST00000560927 CHCHD7Q9BUK0 85 aa10.58□□□□□ -0.72
CRTC3-210ENST00000560927 PYGO1Q9Y3Y4 419 aa10.58□□□□□ -0.72
CRTC3-210ENST00000560927 F8W1H4 67 aa10.58□□□□□ -0.72
CRTC3-210ENST00000560927 LINC00467Q9BRT7 94 aa10.58□□□□□ -0.72
CRTC3-210ENST00000560927 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.57□□□□□ -0.72
CRTC3-210ENST00000560927 IGHV3OR16-12A0A075B7B8 117 aa10.57□□□□□ -0.72
CRTC3-210ENST00000560927 IGKV2-29A2NJV5 120 aaPredicted RBP10.57□□□□□ -0.72
CRTC3-210ENST00000560927 FHL3Q13643 280 aa10.57□□□□□ -0.72
CRTC3-210ENST00000560927 NDUFA11Q86Y39 141 aa10.57□□□□□ -0.72
CRTC3-210ENST00000560927 PTH2Q96A98 100 aa10.57□□□□□ -0.72
CRTC3-210ENST00000560927 CCL24O00175 119 aa10.57□□□□□ -0.72
CRTC3-210ENST00000560927 BEAN1Q3B7T3 259 aa10.57□□□□□ -0.72
CRTC3-210ENST00000560927 SPXQ9BT56 116 aa10.57□□□□□ -0.72
CRTC3-210ENST00000560927 IGHV3-53P01767 116 aa10.56□□□□□ -0.72
CRTC3-210ENST00000560927 CFC1BP0CG36 223 aa10.56□□□□□ -0.72
CRTC3-210ENST00000560927 CFC1P0CG37 223 aa10.56□□□□□ -0.72
CRTC3-210ENST00000560927 C1orf158Q8N1D5 194 aa10.56□□□□□ -0.72
CRTC3-210ENST00000560927 PRO0461Q9UI25 63 aa10.56□□□□□ -0.72
CRTC3-210ENST00000560927 SH2D6Q7Z4S9 175 aa10.56□□□□□ -0.72
CRTC3-210ENST00000560927 MRPS36P82909 103 aaKnown RBP10.55□□□□□ -0.72
CRTC3-210ENST00000560927 GAGE13Q4V321 117 aa10.55□□□□□ -0.72
CRTC3-210ENST00000560927 STHQ8IWL8 128 aa10.55□□□□□ -0.72
CRTC3-210ENST00000560927 C10orf126Q8N4M7 172 aa10.55□□□□□ -0.72
CRTC3-210ENST00000560927 CITED2Q99967 270 aaPredicted RBP10.55□□□□□ -0.72
CRTC3-210ENST00000560927 UBE2D4Q9Y2X8 147 aa10.55□□□□□ -0.72
CRTC3-210ENST00000560927 ACANP16112 2415 aa10.55□□□□□ -0.72
CRTC3-210ENST00000560927 TRAV8-3A0A0A6YYJ7 113 aa10.55□□□□□ -0.72
CRTC3-210ENST00000560927 ADARB2-AS1A8MUL3 147 aa10.55□□□□□ -0.72
CRTC3-210ENST00000560927 RS1O15537 224 aa10.55□□□□□ -0.72
CRTC3-210ENST00000560927 PDZD2O15018 2839 aa10.54□□□□□ -0.72
CRTC3-210ENST00000560927 LOC107984156A0A0G2JMH3 177 aa10.54□□□□□ -0.72
CRTC3-210ENST00000560927 IGHV3-30-3P0DP02 117 aa10.54□□□□□ -0.72
CRTC3-210ENST00000560927 ETDBQ3ZM63 59 aa10.54□□□□□ -0.72
CRTC3-210ENST00000560927 ARL17AQ8IVW1 177 aa10.54□□□□□ -0.72
CRTC3-210ENST00000560927 KRTAP1-1Q07627 177 aa10.53□□□□□ -0.72
CRTC3-210ENST00000560927 TRAV25A0A0B4J276 109 aa10.53□□□□□ -0.72
CRTC3-210ENST00000560927 Q6ZUT4 128 aa10.53□□□□□ -0.72
CRTC3-210ENST00000560927 CLUHP3Q96NS8 147 aa10.53□□□□□ -0.72
CRTC3-210ENST00000560927 EIF4EBP3O60516 100 aaPredicted RBP10.52□□□□□ -0.72
CRTC3-210ENST00000560927 UBE2D3P61077 147 aa10.52□□□□□ -0.72
CRTC3-210ENST00000560927 UBE2D2P62837 147 aa10.52□□□□□ -0.72
CRTC3-210ENST00000560927 TIMM21Q9BVV7 248 aa10.52□□□□□ -0.72
CRTC3-210ENST00000560927 SETXQ7Z333 2677 aaKnown RBP10.52□□□□□ -0.73
CRTC3-210ENST00000560927 A4D1N5 150 aa10.52□□□□□ -0.73
CRTC3-210ENST00000560927 SPANXA1Q9NS26 97 aa10.52□□□□□ -0.73
CRTC3-210ENST00000560927 MTORP42345 2549 aa10.51□□□□□ -0.73
CRTC3-210ENST00000560927 TRGV1A0A0A0MS02 117 aa10.51□□□□□ -0.73
CRTC3-210ENST00000560927 A8MZ25 164 aa10.51□□□□□ -0.73
CRTC3-210ENST00000560927 PSMB2P49721 201 aa10.51□□□□□ -0.73
CRTC3-210ENST00000560927 CRYBA4P53673 196 aa10.51□□□□□ -0.73
CRTC3-210ENST00000560927 DNAJC30Q96LL9 226 aa10.51□□□□□ -0.73
CRTC3-210ENST00000560927 A0A0J9YXY3 114 aa10.51□□□□□ -0.73
CRTC3-210ENST00000560927 JMJD1CQ15652 2540 aa10.51□□□□□ -0.73
CRTC3-210ENST00000560927 MUSTN1Q8IVN3 82 aa10.51□□□□□ -0.73
CRTC3-210ENST00000560927 TEX29Q8N6K0 151 aa10.51□□□□□ -0.73
CRTC3-210ENST00000560927 LINC01006Q8NI28 216 aa10.51□□□□□ -0.73
CRTC3-210ENST00000560927 IL17DQ8TAD2 202 aa10.51□□□□□ -0.73
CRTC3-210ENST00000560927 ANK3Q12955 4377 aaKnown RBP10.5□□□□□ -0.73
CRTC3-210ENST00000560927 WFDC10AQ9H1F0 79 aa10.5□□□□□ -0.73
CRTC3-210ENST00000560927 PRO1854Q9UHT4 67 aa10.5□□□□□ -0.73
CRTC3-210ENST00000560927 TINCRA0A1B0GVN0 87 aa10.49□□□□□ -0.73
CRTC3-210ENST00000560927 SMCPP49901 116 aaPredicted RBP10.49□□□□□ -0.73
CRTC3-210ENST00000560927 Q6ZTI0 123 aa10.49□□□□□ -0.73
CRTC3-210ENST00000560927 YAE1D1Q9NRH1 226 aa10.49□□□□□ -0.73
CRTC3-210ENST00000560927 NOTCH3Q9UM47 2321 aa10.49□□□□□ -0.73
CRTC3-210ENST00000560927 ITPR2Q14571 2701 aa10.49□□□□□ -0.73
CRTC3-210ENST00000560927 IGHV1-58A0A0C4DH39 117 aa10.49□□□□□ -0.73
CRTC3-210ENST00000560927 SPINK8P0C7L1 97 aa10.49□□□□□ -0.73
CRTC3-210ENST00000560927 TSSC4Q9Y5U2 329 aaPredicted RBP10.49□□□□□ -0.73
CRTC3-210ENST00000560927 INSL3P51460 131 aa10.48□□□□□ -0.73
CRTC3-210ENST00000560927 LITAFQ99732 161 aa10.48□□□□□ -0.73
CRTC3-210ENST00000560927 TMEM238C9JI98 176 aa10.48□□□□□ -0.73
CRTC3-210ENST00000560927 TCL1BO95988 128 aa10.48□□□□□ -0.73
CRTC3-210ENST00000560927 GIG44P09565 113 aaPredicted RBP10.47□□□□□ -0.73
CRTC3-210ENST00000560927 VSIG2Q96IQ7 327 aa10.47□□□□□ -0.73
CRTC3-210ENST00000560927 ZNF418Q8TF45 676 aaPredicted RBP10.47□□□□□ -0.73
CRTC3-210ENST00000560927 TMEM263Q8WUH6 116 aaKnown RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms