RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 K7EQG2 157 aa9.97□□□□□ -0.81
CSPG4P11-201ENST00000560634 IGF1P05019 195 aa9.97□□□□□ -0.81
CSPG4P11-201ENST00000560634 FAM236CP0DP71 79 aa9.97□□□□□ -0.81
CSPG4P11-201ENST00000560634 DEFB4AO15263 64 aa9.97□□□□□ -0.81
CSPG4P11-201ENST00000560634 REG3AQ06141 175 aa9.97□□□□□ -0.81
CSPG4P11-201ENST00000560634 CDKN2A-AS1Q9UH64 79 aa9.97□□□□□ -0.81
CSPG4P11-201ENST00000560634 PTPN13Q12923 2485 aa9.97□□□□□ -0.81
CSPG4P11-201ENST00000560634 DOPEY1Q5JWR5 2465 aa9.97□□□□□ -0.81
CSPG4P11-201ENST00000560634 LYRM9A8MSI8 78 aa9.97□□□□□ -0.81
CSPG4P11-201ENST00000560634 IGKV4-1P06312 121 aa9.97□□□□□ -0.81
CSPG4P11-201ENST00000560634 MRPL55Q7Z7F7 128 aaKnown RBP9.97□□□□□ -0.81
CSPG4P11-201ENST00000560634 DSCAML1Q8TD84 2053 aa9.97□□□□□ -0.81
CSPG4P11-201ENST00000560634 GDF5OSQ5U4N7 250 aa9.96□□□□□ -0.81
CSPG4P11-201ENST00000560634 ZNF22P17026 224 aaPredicted RBP9.96□□□□□ -0.81
CSPG4P11-201ENST00000560634 CUL9Q8IWT3 2517 aa9.96□□□□□ -0.82
CSPG4P11-201ENST00000560634 FAM240AA0A1B0GVK7 77 aa9.96□□□□□ -0.82
CSPG4P11-201ENST00000560634 FSTL3O95633 263 aa9.96□□□□□ -0.82
CSPG4P11-201ENST00000560634 P0DMU3 169 aa9.96□□□□□ -0.82
CSPG4P11-201ENST00000560634 FAM231AP0DMU4 169 aa9.96□□□□□ -0.82
CSPG4P11-201ENST00000560634 FAM231CP0DMU5 169 aa9.96□□□□□ -0.82
CSPG4P11-201ENST00000560634 Q6ZTI0 123 aa9.96□□□□□ -0.82
CSPG4P11-201ENST00000560634 KIR2DL5BQ8NHK3 375 aa9.96□□□□□ -0.82
CSPG4P11-201ENST00000560634 MT-ATP8P03928 68 aa9.95□□□□□ -0.82
CSPG4P11-201ENST00000560634 HIGD2AQ9BW72 106 aa9.95□□□□□ -0.82
CSPG4P11-201ENST00000560634 PRR14LQ5THK1 2151 aa9.95□□□□□ -0.82
CSPG4P11-201ENST00000560634 TRBV30A0A0K0K1B3 111 aa9.95□□□□□ -0.82
CSPG4P11-201ENST00000560634 LINC00269Q8N2A0 174 aa9.95□□□□□ -0.82
CSPG4P11-201ENST00000560634 ANAPC1Q9H1A4 1944 aa9.95□□□□□ -0.82
CSPG4P11-201ENST00000560634 TEX49A0A1B0GTD5 131 aa9.95□□□□□ -0.82
CSPG4P11-201ENST00000560634 TMEM223A0PJW6 202 aa9.95□□□□□ -0.82
CSPG4P11-201ENST00000560634 LMO4P61968 165 aa9.95□□□□□ -0.82
CSPG4P11-201ENST00000560634 C3orf22Q8N5N4 141 aa9.95□□□□□ -0.82
CSPG4P11-201ENST00000560634 LINC00308Q8TCZ7 52 aa9.95□□□□□ -0.82
CSPG4P11-201ENST00000560634 IGLV4-3A0A075B6K6 122 aa9.94□□□□□ -0.82
CSPG4P11-201ENST00000560634 USP17L23D6RBM5 183 aa9.94□□□□□ -0.82
CSPG4P11-201ENST00000560634 NOTCH4Q99466 2003 aa9.94□□□□□ -0.82
CSPG4P11-201ENST00000560634 ATP5EP56381 51 aaPredicted RBP9.94□□□□□ -0.82
CSPG4P11-201ENST00000560634 BRWD1-AS2P59051 145 aa9.94□□□□□ -0.82
CSPG4P11-201ENST00000560634 CHCHD10Q8WYQ3 142 aaPredicted RBP9.94□□□□□ -0.82
CSPG4P11-201ENST00000560634 IMUPQ9GZP8 106 aa9.93□□□□□ -0.82
CSPG4P11-201ENST00000560634 LINC00467Q9BRT7 94 aa9.93□□□□□ -0.82
CSPG4P11-201ENST00000560634 TANC1Q9C0D5 1861 aa9.93□□□□□ -0.82
CSPG4P11-201ENST00000560634 NDUFC2-KCTD14E9PQ53 114 aa9.93□□□□□ -0.82
CSPG4P11-201ENST00000560634 C11orf45Q8TAV5 145 aa9.93□□□□□ -0.82
CSPG4P11-201ENST00000560634 V9GYY9 64 aa9.93□□□□□ -0.82
CSPG4P11-201ENST00000560634 NDUFC1O43677 76 aa9.92□□□□□ -0.82
CSPG4P11-201ENST00000560634 SDIM1Q6ZPB5 146 aa9.92□□□□□ -0.82
CSPG4P11-201ENST00000560634 NRGNQ92686 78 aa9.92□□□□□ -0.82
CSPG4P11-201ENST00000560634 CASC2Q6XLA1 102 aa9.92□□□□□ -0.82
CSPG4P11-201ENST00000560634 TP53TG3Q9ULZ0 132 aa9.92□□□□□ -0.82
CSPG4P11-201ENST00000560634 IGKV2-24A0A0C4DH68 120 aa9.91□□□□□ -0.82
CSPG4P11-201ENST00000560634 PYGO1Q9Y3Y4 419 aa9.91□□□□□ -0.82
CSPG4P11-201ENST00000560634 EBI3Q14213 229 aa9.91□□□□□ -0.82
CSPG4P11-201ENST00000560634 DEFB114Q30KQ6 69 aa9.91□□□□□ -0.82
CSPG4P11-201ENST00000560634 FAM222AQ5U5X8 452 aa9.91□□□□□ -0.82
CSPG4P11-201ENST00000560634 TIMM17BO60830 172 aa9.91□□□□□ -0.82
CSPG4P11-201ENST00000560634 TP73-AS1Q9UF72 201 aa9.9□□□□□ -0.82
CSPG4P11-201ENST00000560634 DNAJC9-AS1A6NH13 148 aa9.9□□□□□ -0.82
CSPG4P11-201ENST00000560634 ZNF295-AS1Q8N0V1 137 aa9.9□□□□□ -0.82
CSPG4P11-201ENST00000560634 SPTSSBQ8NFR3 76 aa9.9□□□□□ -0.82
CSPG4P11-201ENST00000560634 U3KQK5 164 aa9.9□□□□□ -0.82
CSPG4P11-201ENST00000560634 TRBV6-5A0A0K0K1A5 114 aa9.9□□□□□ -0.82
CSPG4P11-201ENST00000560634 TRBV6-4A0A1B0GX49 114 aa9.9□□□□□ -0.82
CSPG4P11-201ENST00000560634 M0QY20 66 aa9.9□□□□□ -0.82
CSPG4P11-201ENST00000560634 PLXNB1O43157 2135 aa9.9□□□□□ -0.82
CSPG4P11-201ENST00000560634 NCOA6Q14686 2063 aaPredicted RBP9.9□□□□□ -0.82
CSPG4P11-201ENST00000560634 K7ERS5 55 aa9.9□□□□□ -0.83
CSPG4P11-201ENST00000560634 TRIAP1O43715 76 aa9.9□□□□□ -0.83
CSPG4P11-201ENST00000560634 LRRC75A-AS1Q8N1F1 130 aa9.89□□□□□ -0.83
CSPG4P11-201ENST00000560634 TRBV27A0A0K0K1C4 114 aa9.89□□□□□ -0.83
CSPG4P11-201ENST00000560634 LINC01548A6NM66 108 aa9.89□□□□□ -0.83
CSPG4P11-201ENST00000560634 ENHOQ6UWT2 76 aa9.88□□□□□ -0.83
CSPG4P11-201ENST00000560634 TRBV6-8A0A0A6YYG3 113 aa9.88□□□□□ -0.83
CSPG4P11-201ENST00000560634 EIF4EBP1Q13541 118 aaPredicted RBP9.88□□□□□ -0.83
CSPG4P11-201ENST00000560634 NAV3Q8IVL0 2385 aa9.88□□□□□ -0.83
CSPG4P11-201ENST00000560634 A0A1W2PNU3 283 aaPredicted RBP9.88□□□□□ -0.83
CSPG4P11-201ENST00000560634 FAM19A1Q7Z5A9 133 aa9.88□□□□□ -0.83
CSPG4P11-201ENST00000560634 MAPKAPK5-AS1Q8N8E1 139 aa9.88□□□□□ -0.83
CSPG4P11-201ENST00000560634 OTOGLQ3ZCN5 2332 aa9.88□□□□□ -0.83
CSPG4P11-201ENST00000560634 ZFAND3Q9H8U3 227 aa9.87□□□□□ -0.83
CSPG4P11-201ENST00000560634 RBX1P62877 108 aa9.87□□□□□ -0.83
CSPG4P11-201ENST00000560634 ARHGAP21Q5T5U3 1957 aa9.87□□□□□ -0.83
CSPG4P11-201ENST00000560634 Q6YL49 198 aa9.87□□□□□ -0.83
CSPG4P11-201ENST00000560634 Q8NA96 180 aa9.87□□□□□ -0.83
CSPG4P11-201ENST00000560634 Q6ZPA2 131 aa9.87□□□□□ -0.83
CSPG4P11-201ENST00000560634 C6orf99Q4VX62 202 aa9.86□□□□□ -0.83
CSPG4P11-201ENST00000560634 CFAP126Q5VTH2 177 aa9.86□□□□□ -0.83
CSPG4P11-201ENST00000560634 SERP2Q8N6R1 65 aa9.86□□□□□ -0.83
CSPG4P11-201ENST00000560634 CRYGDP07320 174 aa9.86□□□□□ -0.83
CSPG4P11-201ENST00000560634 PIK3CD-AS1Q5SR53 167 aa9.86□□□□□ -0.83
CSPG4P11-201ENST00000560634 RNF185Q96GF1 192 aa9.86□□□□□ -0.83
CSPG4P11-201ENST00000560634 TNRC6BQ9UPQ9 1833 aaKnown RBP9.86□□□□□ -0.83
CSPG4P11-201ENST00000560634 CRIP1P50238 77 aa9.86□□□□□ -0.83
CSPG4P11-201ENST00000560634 NDUFA7O95182 113 aa9.85□□□□□ -0.83
CSPG4P11-201ENST00000560634 CCKP06307 115 aa9.85□□□□□ -0.83
CSPG4P11-201ENST00000560634 MIFP14174 115 aa9.85□□□□□ -0.83
CSPG4P11-201ENST00000560634 WFDC11Q8NEX6 87 aa9.85□□□□□ -0.83
CSPG4P11-201ENST00000560634 SYCNQ0VAF6 134 aa9.85□□□□□ -0.83
CSPG4P11-201ENST00000560634 MPLKIPQ8TAP9 179 aa9.85□□□□□ -0.83
CSPG4P11-201ENST00000560634 SLPIP03973 132 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms