RNA–Protein interactions for RNA: ENST00000560213.1

LRRC28-217, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-217ENST00000560213 IBA57-AS1B1ANH7 110 aa11.03□□□□□ -0.64
LRRC28-217ENST00000560213 VCYO14598 125 aa11.03□□□□□ -0.64
LRRC28-217ENST00000560213 GAGE6Q13070 117 aa11.03□□□□□ -0.64
LRRC28-217ENST00000560213 TMEM136Q6ZRR5 245 aa11.03□□□□□ -0.64
LRRC28-217ENST00000560213 NFE4Q86UQ8 179 aa11.03□□□□□ -0.64
LRRC28-217ENST00000560213 ORMDL3Q8N138 153 aa11.03□□□□□ -0.64
LRRC28-217ENST00000560213 TRBV24-1A0A075B6N3 115 aa11.02□□□□□ -0.65
LRRC28-217ENST00000560213 TNFRSF6BO95407 300 aa11.02□□□□□ -0.65
LRRC28-217ENST00000560213 APCSP02743 223 aa11.02□□□□□ -0.65
LRRC28-217ENST00000560213 ELOBQ15370 118 aa11.02□□□□□ -0.65
LRRC28-217ENST00000560213 ATRAIDQ6UW56 229 aa11.02□□□□□ -0.65
LRRC28-217ENST00000560213 C20orf78Q9BR46 151 aa11.02□□□□□ -0.65
LRRC28-217ENST00000560213 RYR3Q15413 4870 aa11.01□□□□□ -0.65
LRRC28-217ENST00000560213 TRBV27A0A0K0K1C4 114 aa11.01□□□□□ -0.65
LRRC28-217ENST00000560213 PRSS29PA6NIE9 313 aa11.01□□□□□ -0.65
LRRC28-217ENST00000560213 PHOX2AO14813 284 aa11.01□□□□□ -0.65
LRRC28-217ENST00000560213 UBE2L6O14933 153 aa11.01□□□□□ -0.65
LRRC28-217ENST00000560213 MPV17L2Q567V2 206 aa11.01□□□□□ -0.65
LRRC28-217ENST00000560213 PRELID3AQ96N28 172 aa11.01□□□□□ -0.65
LRRC28-217ENST00000560213 KLK12Q9UKR0 248 aa11.01□□□□□ -0.65
LRRC28-217ENST00000560213 NPYP01303 97 aa11□□□□□ -0.65
LRRC28-217ENST00000560213 LAGE3Q14657 143 aa11□□□□□ -0.65
LRRC28-217ENST00000560213 COX19Q49B96 90 aa11□□□□□ -0.65
LRRC28-217ENST00000560213 KIR2DL4Q99706 377 aa11□□□□□ -0.65
LRRC28-217ENST00000560213 TRAV8-3A0A0A6YYJ7 113 aa10.99□□□□□ -0.65
LRRC28-217ENST00000560213 TSHBP01222 138 aa10.99□□□□□ -0.65
LRRC28-217ENST00000560213 HLA-DQA1P01909 254 aa10.99□□□□□ -0.65
LRRC28-217ENST00000560213 FCER1GP30273 86 aa10.99□□□□□ -0.65
LRRC28-217ENST00000560213 RBX1P62877 108 aa10.99□□□□□ -0.65
LRRC28-217ENST00000560213 Q8N976 141 aa10.99□□□□□ -0.65
LRRC28-217ENST00000560213 GNB1LQ9BYB4 327 aa10.99□□□□□ -0.65
LRRC28-217ENST00000560213 Q9HAA7 133 aa10.99□□□□□ -0.65
LRRC28-217ENST00000560213 DNAH6Q9C0G6 4158 aa10.99□□□□□ -0.65
LRRC28-217ENST00000560213 ANGP03950 147 aaKnown RBP10.98□□□□□ -0.65
LRRC28-217ENST00000560213 RPL32P62910 135 aaKnown RBP10.98□□□□□ -0.65
LRRC28-217ENST00000560213 LAMTOR2Q9Y2Q5 125 aa10.98□□□□□ -0.65
LRRC28-217ENST00000560213 TGIF2-C20orf24A0A0A6YYL0 155 aa10.97□□□□□ -0.65
LRRC28-217ENST00000560213 H7C423 109 aa10.97□□□□□ -0.65
LRRC28-217ENST00000560213 Q6ZRN7 208 aaPredicted RBP10.97□□□□□ -0.65
LRRC28-217ENST00000560213 UBE2WQ96B02 151 aa10.97□□□□□ -0.65
LRRC28-217ENST00000560213 SMIM2Q9BVW6 85 aa10.97□□□□□ -0.65
LRRC28-217ENST00000560213 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.96□□□□□ -0.65
LRRC28-217ENST00000560213 A0A1B0GUV1 79 aa10.96□□□□□ -0.65
LRRC28-217ENST00000560213 IGKV2-29A2NJV5 120 aaPredicted RBP10.96□□□□□ -0.65
LRRC28-217ENST00000560213 TNP2Q05952 138 aa10.96□□□□□ -0.65
LRRC28-217ENST00000560213 KIAA1644Q3SXP7 199 aa10.96□□□□□ -0.65
LRRC28-217ENST00000560213 AMMECR1LQ6DCA0 310 aa10.96□□□□□ -0.65
LRRC28-217ENST00000560213 TCAPO15273 167 aa10.95□□□□□ -0.66
LRRC28-217ENST00000560213 PSCAO43653 123 aa10.95□□□□□ -0.66
LRRC28-217ENST00000560213 CRPP02741 224 aa10.95□□□□□ -0.66
LRRC28-217ENST00000560213 MT-ND6P03923 174 aa10.95□□□□□ -0.66
LRRC28-217ENST00000560213 ESDP10768 282 aa10.95□□□□□ -0.66
LRRC28-217ENST00000560213 Q0VG73 95 aa10.95□□□□□ -0.66
LRRC28-217ENST00000560213 RNASEKQ6P5S7 137 aaKnown RBP10.95□□□□□ -0.66
LRRC28-217ENST00000560213 RMI2Q96E14 147 aa10.95□□□□□ -0.66
LRRC28-217ENST00000560213 TM2D2Q9BX73 214 aa10.95□□□□□ -0.66
LRRC28-217ENST00000560213 MAP1LC3AQ9H492 121 aa10.95□□□□□ -0.66
LRRC28-217ENST00000560213 LOC389332A0A1B0GUA5 103 aa10.94□□□□□ -0.66
LRRC28-217ENST00000560213 SMCO4Q9NRQ5 59 aa10.94□□□□□ -0.66
LRRC28-217ENST00000560213 IGLV4-60A0A075B6I1 120 aa10.93□□□□□ -0.66
LRRC28-217ENST00000560213 PRSS47A8MTI9 375 aa10.93□□□□□ -0.66
LRRC28-217ENST00000560213 FGF6P10767 208 aa10.93□□□□□ -0.66
LRRC28-217ENST00000560213 RAB5AP20339 215 aa10.93□□□□□ -0.66
LRRC28-217ENST00000560213 FABP9Q0Z7S8 132 aa10.93□□□□□ -0.66
LRRC28-217ENST00000560213 ENHOQ6UWT2 76 aa10.93□□□□□ -0.66
LRRC28-217ENST00000560213 LINC00269Q8N2A0 174 aa10.93□□□□□ -0.66
LRRC28-217ENST00000560213 C20orf203Q8NBC4 194 aa10.93□□□□□ -0.66
LRRC28-217ENST00000560213 MRPL18Q9H0U6 180 aaKnown RBP10.93□□□□□ -0.66
LRRC28-217ENST00000560213 IGKV2D-24A0A075B6R9 120 aa10.92□□□□□ -0.66
LRRC28-217ENST00000560213 TMEM18Q96B42 140 aa10.92□□□□□ -0.66
LRRC28-217ENST00000560213 COX11Q9Y6N1 276 aa10.92□□□□□ -0.66
LRRC28-217ENST00000560213 ZNF25P17030 456 aaPredicted RBP10.91□□□□□ -0.66
LRRC28-217ENST00000560213 REG3AQ06141 175 aa10.91□□□□□ -0.66
LRRC28-217ENST00000560213 SMAGPQ0VAQ4 97 aa10.91□□□□□ -0.66
LRRC28-217ENST00000560213 MIAQ16674 131 aa10.91□□□□□ -0.66
LRRC28-217ENST00000560213 CLPSL2Q6UWE3 100 aa10.91□□□□□ -0.66
LRRC28-217ENST00000560213 TMEM101Q96IK0 257 aa10.91□□□□□ -0.66
LRRC28-217ENST00000560213 PRR34Q9NV39 138 aa10.91□□□□□ -0.66
LRRC28-217ENST00000560213 TRAPPC1Q9Y5R8 145 aa10.91□□□□□ -0.66
LRRC28-217ENST00000560213 EREGO14944 169 aa10.9□□□□□ -0.66
LRRC28-217ENST00000560213 DGAT2L7PQ6IED9 249 aa10.9□□□□□ -0.66
LRRC28-217ENST00000560213 CBLN2Q8IUK8 224 aa10.9□□□□□ -0.66
LRRC28-217ENST00000560213 Q8N8P6 123 aa10.9□□□□□ -0.66
LRRC28-217ENST00000560213 OR5A1Q8NGJ0 315 aa10.9□□□□□ -0.66
LRRC28-217ENST00000560213 YPEL4Q96NS1 127 aa10.9□□□□□ -0.66
LRRC28-217ENST00000560213 C1orf43Q9BWL3 253 aa10.9□□□□□ -0.66
LRRC28-217ENST00000560213 A0A1B0GVY2 172 aa10.89□□□□□ -0.67
LRRC28-217ENST00000560213 ALKBH7Q9BT30 221 aaPredicted RBP10.89□□□□□ -0.67
LRRC28-217ENST00000560213 MRPL52Q86TS9 123 aaKnown RBP10.88□□□□□ -0.67
LRRC28-217ENST00000560213 NXT2Q9NPJ8 142 aaKnown RBP10.88□□□□□ -0.67
LRRC28-217ENST00000560213 A0A087WTM6 91 aa10.87□□□□□ -0.67
LRRC28-217ENST00000560213 IFI27P40305 119 aaPredicted RBP10.87□□□□□ -0.67
LRRC28-217ENST00000560213 TRAV8-4A0A0B4J246 113 aa10.86□□□□□ -0.67
LRRC28-217ENST00000560213 IGKV3OR2-268A0A0C4DH90 116 aa10.86□□□□□ -0.67
LRRC28-217ENST00000560213 PRSS3P2Q8NHM4 247 aa10.86□□□□□ -0.67
LRRC28-217ENST00000560213 UBE2D4Q9Y2X8 147 aa10.86□□□□□ -0.67
LRRC28-217ENST00000560213 CSDC2Q9Y534 153 aaKnown RBP10.86□□□□□ -0.67
LRRC28-217ENST00000560213 IGLV10-54A0A075B6I4 117 aa10.85□□□□□ -0.67
LRRC28-217ENST00000560213 K7EMI3 77 aa10.85□□□□□ -0.67
LRRC28-217ENST00000560213 RPL39P62891 51 aaKnown RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms