RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 GAGE6Q13070 117 aa12.37□□□□□ -0.43
RABGGTA-214ENST00000560163 FAM74A3Q4VXF1 159 aa12.37□□□□□ -0.43
RABGGTA-214ENST00000560163 TMEM97Q5BJF2 176 aa12.37□□□□□ -0.43
RABGGTA-214ENST00000560163 TMSB15BA0A087X1C1 80 aa12.36□□□□□ -0.43
RABGGTA-214ENST00000560163 AKR1C3P42330 323 aa12.36□□□□□ -0.43
RABGGTA-214ENST00000560163 FMC1Q96HJ9 113 aa12.36□□□□□ -0.43
RABGGTA-214ENST00000560163 AP5S1Q9NUS5 200 aa12.36□□□□□ -0.43
RABGGTA-214ENST00000560163 ZFP30Q9Y2G7 519 aa12.36□□□□□ -0.43
RABGGTA-214ENST00000560163 ZNF56Q15929 161 aa12.35□□□□□ -0.43
RABGGTA-214ENST00000560163 C10orf91Q5T1B1 145 aa12.35□□□□□ -0.43
RABGGTA-214ENST00000560163 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.35□□□□□ -0.43
RABGGTA-214ENST00000560163 SEC11CQ9BY50 192 aa12.35□□□□□ -0.43
RABGGTA-214ENST00000560163 TRAV8-4A0A0B4J246 113 aa12.34□□□□□ -0.43
RABGGTA-214ENST00000560163 P01737 135 aa12.34□□□□□ -0.43
RABGGTA-214ENST00000560163 RPL35P42766 123 aaKnown RBP12.34□□□□□ -0.43
RABGGTA-214ENST00000560163 IQCJQ1A5X6 159 aa12.34□□□□□ -0.43
RABGGTA-214ENST00000560163 C20orf203Q8NBC4 194 aa12.34□□□□□ -0.43
RABGGTA-214ENST00000560163 GTSF1Q8WW33 167 aa12.34□□□□□ -0.43
RABGGTA-214ENST00000560163 DERL1Q9BUN8 251 aa12.34□□□□□ -0.43
RABGGTA-214ENST00000560163 ADCYAP1P18509 176 aa12.33□□□□□ -0.44
RABGGTA-214ENST00000560163 COX6A2Q02221 97 aa12.33□□□□□ -0.44
RABGGTA-214ENST00000560163 SPINK6Q6UWN8 80 aa12.33□□□□□ -0.44
RABGGTA-214ENST00000560163 SMIM12Q96EX1 92 aa12.33□□□□□ -0.44
RABGGTA-214ENST00000560163 SMIM7Q9BQ49 75 aa12.33□□□□□ -0.44
RABGGTA-214ENST00000560163 CARHSP1Q9Y2V2 147 aaKnown RBP12.33□□□□□ -0.44
RABGGTA-214ENST00000560163 TRBV25-1A0A075B6N4 114 aa12.32□□□□□ -0.44
RABGGTA-214ENST00000560163 MUC21A0A0G2JKD1 596 aa12.32□□□□□ -0.44
RABGGTA-214ENST00000560163 ZNF727A8MUV8 499 aa12.32□□□□□ -0.44
RABGGTA-214ENST00000560163 UBE2G1P62253 170 aa12.32□□□□□ -0.44
RABGGTA-214ENST00000560163 SRSF9Q13242 221 aaKnown RBP eCLIP12.32□□□□□ -0.44
RABGGTA-214ENST00000560163 OR10AG1Q8NH19 301 aa12.32□□□□□ -0.44
RABGGTA-214ENST00000560163 TRBV20OR9-2A0A075B6H5 130 aa12.31□□□□□ -0.44
RABGGTA-214ENST00000560163 F8W036 122 aa12.31□□□□□ -0.44
RABGGTA-214ENST00000560163 LTAP01374 205 aa12.31□□□□□ -0.44
RABGGTA-214ENST00000560163 GZMBP10144 247 aa12.31□□□□□ -0.44
RABGGTA-214ENST00000560163 CEBPGP53567 150 aa12.31□□□□□ -0.44
RABGGTA-214ENST00000560163 REG3GQ6UW15 175 aa12.31□□□□□ -0.44
RABGGTA-214ENST00000560163 GFRA4Q9GZZ7 299 aa12.31□□□□□ -0.44
RABGGTA-214ENST00000560163 CENPWQ5EE01 88 aa12.3□□□□□ -0.44
RABGGTA-214ENST00000560163 PRSS3P2Q8NHM4 247 aa12.3□□□□□ -0.44
RABGGTA-214ENST00000560163 SSBP4Q9BWG4 385 aaPredicted RBP12.3□□□□□ -0.44
RABGGTA-214ENST00000560163 MUC2Q02817 5179 aa12.3□□□□□ -0.44
RABGGTA-214ENST00000560163 IGLV4-60A0A075B6I1 120 aa12.29□□□□□ -0.44
RABGGTA-214ENST00000560163 A0A1B0GUV1 79 aa12.29□□□□□ -0.44
RABGGTA-214ENST00000560163 ATP6V1G1O75348 118 aa12.29□□□□□ -0.44
RABGGTA-214ENST00000560163 GNG4P50150 75 aa12.29□□□□□ -0.44
RABGGTA-214ENST00000560163 MAJINQ3KP22 176 aa12.29□□□□□ -0.44
RABGGTA-214ENST00000560163 C15orf56Q8N910 161 aa12.29□□□□□ -0.44
RABGGTA-214ENST00000560163 MLST8Q9BVC4 326 aa12.29□□□□□ -0.44
RABGGTA-214ENST00000560163 NAT8Q9UHE5 227 aa12.29□□□□□ -0.44
RABGGTA-214ENST00000560163 IGHV1-24A0A0C4DH33 117 aa12.28□□□□□ -0.44
RABGGTA-214ENST00000560163 PNRC1Q12796 327 aaPredicted RBP12.28□□□□□ -0.44
RABGGTA-214ENST00000560163 TMEM241Q24JQ0 296 aa12.28□□□□□ -0.44
RABGGTA-214ENST00000560163 STPG4Q8N801 248 aa12.28□□□□□ -0.44
RABGGTA-214ENST00000560163 F5H697 171 aa12.27□□□□□ -0.45
RABGGTA-214ENST00000560163 SNAI2O43623 268 aa12.27□□□□□ -0.45
RABGGTA-214ENST00000560163 S100A1P23297 94 aa12.27□□□□□ -0.45
RABGGTA-214ENST00000560163 RPS10P46783 165 aaKnown RBP12.27□□□□□ -0.45
RABGGTA-214ENST00000560163 BAGE2Q86Y30 109 aa12.27□□□□□ -0.45
RABGGTA-214ENST00000560163 IGKV2-24A0A0C4DH68 120 aa12.26□□□□□ -0.45
RABGGTA-214ENST00000560163 CXCL1P09341 107 aa12.26□□□□□ -0.45
RABGGTA-214ENST00000560163 LINC01551Q86U37 167 aa12.26□□□□□ -0.45
RABGGTA-214ENST00000560163 KRTAP9-2Q9BYQ4 174 aa12.26□□□□□ -0.45
RABGGTA-214ENST00000560163 RPL23P62829 140 aaKnown RBP12.25□□□□□ -0.45
RABGGTA-214ENST00000560163 OCC1Q8TAD7 63 aa12.25□□□□□ -0.45
RABGGTA-214ENST00000560163 BIN3Q9NQY0 253 aa12.25□□□□□ -0.45
RABGGTA-214ENST00000560163 MUC21A0A140T8X8 626 aa12.24□□□□□ -0.45
RABGGTA-214ENST00000560163 OR5AL1P0C617 328 aa12.24□□□□□ -0.45
RABGGTA-214ENST00000560163 SVBPQ8N300 66 aa12.24□□□□□ -0.45
RABGGTA-214ENST00000560163 M0QY20 66 aa12.23□□□□□ -0.45
RABGGTA-214ENST00000560163 A0A096LNI7 61 aa12.22□□□□□ -0.45
RABGGTA-214ENST00000560163 K7EN84 100 aa12.22□□□□□ -0.45
RABGGTA-214ENST00000560163 APOC3P02656 99 aa12.22□□□□□ -0.45
RABGGTA-214ENST00000560163 SPANXN1Q5VSR9 72 aa12.22□□□□□ -0.45
RABGGTA-214ENST00000560163 CFAP161Q6P656 301 aa12.22□□□□□ -0.45
RABGGTA-214ENST00000560163 ISOC2Q96AB3 205 aa12.22□□□□□ -0.45
RABGGTA-214ENST00000560163 SNAPINO95295 136 aa12.21□□□□□ -0.45
RABGGTA-214ENST00000560163 ADIRFQ15847 76 aa12.21□□□□□ -0.45
RABGGTA-214ENST00000560163 FAM231DQ6ZW35 169 aa12.21□□□□□ -0.45
RABGGTA-214ENST00000560163 TMEM243Q9BU79 118 aa12.21□□□□□ -0.45
RABGGTA-214ENST00000560163 GAGE12HA6NDE8 117 aa12.2□□□□□ -0.46
RABGGTA-214ENST00000560163 RHEBQ15382 184 aa12.2□□□□□ -0.46
RABGGTA-214ENST00000560163 HIGD2BQ4VC39 106 aa12.2□□□□□ -0.46
RABGGTA-214ENST00000560163 Q6ZRP5 223 aa12.19□□□□□ -0.46
RABGGTA-214ENST00000560163 C19orf71A6NCJ1 209 aa12.18□□□□□ -0.46
RABGGTA-214ENST00000560163 SMIM17P0DL12 118 aa12.18□□□□□ -0.46
RABGGTA-214ENST00000560163 SSTP61278 116 aa12.18□□□□□ -0.46
RABGGTA-214ENST00000560163 OSTCQ9NRP0 149 aa12.18□□□□□ -0.46
RABGGTA-214ENST00000560163 GVQW2A0A096LPI5 108 aaPredicted RBP12.17□□□□□ -0.46
RABGGTA-214ENST00000560163 PGLYRP4Q96LB8 373 aa12.17□□□□□ -0.46
RABGGTA-214ENST00000560163 AP1S3Q96PC3 154 aa12.17□□□□□ -0.46
RABGGTA-214ENST00000560163 LINC00474Q9P2X8 69 aa12.17□□□□□ -0.46
RABGGTA-214ENST00000560163 SUMO4Q6EEV6 95 aa12.16□□□□□ -0.46
RABGGTA-214ENST00000560163 ANAPC16Q96DE5 110 aa12.16□□□□□ -0.46
RABGGTA-214ENST00000560163 C7orf77A4D0Y5 90 aa12.15□□□□□ -0.46
RABGGTA-214ENST00000560163 PPP1R2P9O14990 202 aa12.15□□□□□ -0.46
RABGGTA-214ENST00000560163 MT-ND4LP03901 98 aa12.15□□□□□ -0.46
RABGGTA-214ENST00000560163 CTDSP1Q9GZU7 261 aa12.15□□□□□ -0.46
RABGGTA-214ENST00000560163 TMEM242Q9NWH2 141 aa12.15□□□□□ -0.46
RABGGTA-214ENST00000560163 H7C1H1 209 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms