RNA–Protein interactions for RNA: ENST00000559774.6

LRRC28-215, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-215ENST00000559774 NXT2Q9NPJ8 142 aaKnown RBP5.96□□□□□ -1.46
LRRC28-215ENST00000559774 TRAV9-2A0A087WT02 112 aa5.95□□□□□ -1.46
LRRC28-215ENST00000559774 IGHV3-38A0A0C4DH36 116 aa5.95□□□□□ -1.46
LRRC28-215ENST00000559774 SIVA1O15304 175 aa5.95□□□□□ -1.46
LRRC28-215ENST00000559774 DNAH10OSP0CZ25 163 aa5.95□□□□□ -1.46
LRRC28-215ENST00000559774 RAB5AP20339 215 aa5.95□□□□□ -1.46
LRRC28-215ENST00000559774 G0S2P27469 103 aa5.95□□□□□ -1.46
LRRC28-215ENST00000559774 LINC01556Q5JQF7 62 aa5.95□□□□□ -1.46
LRRC28-215ENST00000559774 NTM-AS1Q6ZSK4 140 aa5.95□□□□□ -1.46
LRRC28-215ENST00000559774 A0A1B0GUV1 79 aa5.94□□□□□ -1.46
LRRC28-215ENST00000559774 LINC01549A6NIU2 74 aa5.94□□□□□ -1.46
LRRC28-215ENST00000559774 LY6G6CO95867 125 aa5.94□□□□□ -1.46
LRRC28-215ENST00000559774 TSHBP01222 138 aa5.94□□□□□ -1.46
LRRC28-215ENST00000559774 FCER1GP30273 86 aa5.94□□□□□ -1.46
LRRC28-215ENST00000559774 SMAGPQ0VAQ4 97 aa5.94□□□□□ -1.46
LRRC28-215ENST00000559774 TTC32Q5I0X7 151 aa5.94□□□□□ -1.46
LRRC28-215ENST00000559774 NIT1Q86X76 327 aa5.94□□□□□ -1.46
LRRC28-215ENST00000559774 C10orf126Q8N4M7 172 aa5.94□□□□□ -1.46
LRRC28-215ENST00000559774 Q8N8P6 123 aa5.94□□□□□ -1.46
LRRC28-215ENST00000559774 TMEM18Q96B42 140 aa5.94□□□□□ -1.46
LRRC28-215ENST00000559774 TMEM243Q9BU79 118 aa5.94□□□□□ -1.46
LRRC28-215ENST00000559774 IGLV2-18A0A075B6J9 118 aa5.93□□□□□ -1.46
LRRC28-215ENST00000559774 LINC01546A6NGU7 62 aa5.93□□□□□ -1.46
LRRC28-215ENST00000559774 SCO1O75880 301 aa5.93□□□□□ -1.46
LRRC28-215ENST00000559774 ESDP10768 282 aa5.93□□□□□ -1.46
LRRC28-215ENST00000559774 AMTP48728 403 aa5.93□□□□□ -1.46
LRRC28-215ENST00000559774 KIAA1644Q3SXP7 199 aa5.93□□□□□ -1.46
LRRC28-215ENST00000559774 ORMDL2Q53FV1 153 aa5.93□□□□□ -1.46
LRRC28-215ENST00000559774 VPS13DQ5THJ4 4388 aa5.92□□□□□ -1.46
LRRC28-215ENST00000559774 UBE2L6O14933 153 aa5.92□□□□□ -1.46
LRRC28-215ENST00000559774 TRGC2P03986 189 aa5.92□□□□□ -1.46
LRRC28-215ENST00000559774 ZNF25P17030 456 aaPredicted RBP5.92□□□□□ -1.46
LRRC28-215ENST00000559774 RAB5BP61020 215 aa5.92□□□□□ -1.46
LRRC28-215ENST00000559774 WFDC10BQ8IUB3 73 aa5.92□□□□□ -1.46
LRRC28-215ENST00000559774 PRSS3P2Q8NHM4 247 aa5.92□□□□□ -1.46
LRRC28-215ENST00000559774 CHCHD5Q9BSY4 110 aa5.92□□□□□ -1.46
LRRC28-215ENST00000559774 CSDC2Q9Y534 153 aaKnown RBP5.92□□□□□ -1.46
LRRC28-215ENST00000559774 A0A087WX48 190 aa5.91□□□□□ -1.46
LRRC28-215ENST00000559774 NBDYA0A0U1RRE5 68 aa5.91□□□□□ -1.46
LRRC28-215ENST00000559774 LAGE3Q14657 143 aa5.91□□□□□ -1.46
LRRC28-215ENST00000559774 MRPL52Q86TS9 123 aaKnown RBP5.91□□□□□ -1.46
LRRC28-215ENST00000559774 C20orf203Q8NBC4 194 aa5.91□□□□□ -1.46
LRRC28-215ENST00000559774 C18orf32Q8TCD1 76 aa5.91□□□□□ -1.46
LRRC28-215ENST00000559774 TIMM21Q9BVV7 248 aa5.91□□□□□ -1.46
LRRC28-215ENST00000559774 DNAH1Q9P2D7 4330 aa5.9□□□□□ -1.46
LRRC28-215ENST00000559774 LOC389332A0A1B0GUA5 103 aa5.9□□□□□ -1.46
LRRC28-215ENST00000559774 TMEM262E9PQX1 116 aa5.9□□□□□ -1.46
LRRC28-215ENST00000559774 NPSP0C0P6 89 aa5.9□□□□□ -1.46
LRRC28-215ENST00000559774 IFI27P40305 119 aaPredicted RBP5.9□□□□□ -1.46
LRRC28-215ENST00000559774 Q0VG73 95 aa5.9□□□□□ -1.46
LRRC28-215ENST00000559774 Q6ZR54 194 aa5.9□□□□□ -1.46
LRRC28-215ENST00000559774 ALMS1Q8TCU4 4167 aa5.89□□□□□ -1.47
LRRC28-215ENST00000559774 IBA57-AS1B1ANH7 110 aa5.89□□□□□ -1.47
LRRC28-215ENST00000559774 LINC00614P0C842 121 aa5.89□□□□□ -1.47
LRRC28-215ENST00000559774 RBX1P62877 108 aa5.89□□□□□ -1.47
LRRC28-215ENST00000559774 FA2HQ7L5A8 372 aa5.89□□□□□ -1.47
LRRC28-215ENST00000559774 NFE4Q86UQ8 179 aa5.89□□□□□ -1.47
LRRC28-215ENST00000559774 CHCHD1Q96BP2 118 aaKnown RBP5.89□□□□□ -1.47
LRRC28-215ENST00000559774 TMEM101Q96IK0 257 aa5.89□□□□□ -1.47
LRRC28-215ENST00000559774 SPANXA1Q9NS26 97 aa5.89□□□□□ -1.47
LRRC28-215ENST00000559774 AP5S1Q9NUS5 200 aa5.89□□□□□ -1.47
LRRC28-215ENST00000559774 PYGO1Q9Y3Y4 419 aa5.89□□□□□ -1.47
LRRC28-215ENST00000559774 LYSTQ99698 3801 aa5.88□□□□□ -1.47
LRRC28-215ENST00000559774 TRAV8-3A0A0A6YYJ7 113 aa5.88□□□□□ -1.47
LRRC28-215ENST00000559774 FGF6P10767 208 aa5.88□□□□□ -1.47
LRRC28-215ENST00000559774 GAGE6Q13070 117 aa5.88□□□□□ -1.47
LRRC28-215ENST00000559774 MPV17L2Q567V2 206 aa5.88□□□□□ -1.47
LRRC28-215ENST00000559774 AMMECR1LQ6DCA0 310 aa5.88□□□□□ -1.47
LRRC28-215ENST00000559774 PRR34Q9NV39 138 aa5.88□□□□□ -1.47
LRRC28-215ENST00000559774 CYSLTR1Q9Y271 337 aa5.88□□□□□ -1.47
LRRC28-215ENST00000559774 COX11Q9Y6N1 276 aa5.88□□□□□ -1.47
LRRC28-215ENST00000559774 SACSQ9NZJ4 4579 aa5.87□□□□□ -1.47
LRRC28-215ENST00000559774 KMT2CQ8NEZ4 4911 aaKnown RBP5.87□□□□□ -1.47
LRRC28-215ENST00000559774 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.87□□□□□ -1.47
LRRC28-215ENST00000559774 IGKV2-29A2NJV5 120 aaPredicted RBP5.87□□□□□ -1.47
LRRC28-215ENST00000559774 CCL25O15444 150 aa5.87□□□□□ -1.47
LRRC28-215ENST00000559774 IGHV3-30P01768 117 aa5.87□□□□□ -1.47
LRRC28-215ENST00000559774 IGHV3-33P01772 117 aa5.87□□□□□ -1.47
LRRC28-215ENST00000559774 IGHV3-30-3P0DP02 117 aa5.87□□□□□ -1.47
LRRC28-215ENST00000559774 IGHV3-30-5P0DP03 117 aa5.87□□□□□ -1.47
LRRC28-215ENST00000559774 MRPS36P82909 103 aaKnown RBP5.87□□□□□ -1.47
LRRC28-215ENST00000559774 DGAT2L7PQ6IED9 249 aa5.87□□□□□ -1.47
LRRC28-215ENST00000559774 C2orf66Q6UXQ4 117 aa5.87□□□□□ -1.47
LRRC28-215ENST00000559774 OR5A1Q8NGJ0 315 aa5.87□□□□□ -1.47
LRRC28-215ENST00000559774 TOMM6Q96B49 74 aa5.87□□□□□ -1.47
LRRC28-215ENST00000559774 RMI2Q96E14 147 aa5.87□□□□□ -1.47
LRRC28-215ENST00000559774 UBE2D4Q9Y2X8 147 aa5.87□□□□□ -1.47
LRRC28-215ENST00000559774 TRAV8-4A0A0B4J246 113 aa5.86□□□□□ -1.47
LRRC28-215ENST00000559774 C1orf196B1AJZ1 125 aa5.86□□□□□ -1.47
LRRC28-215ENST00000559774 ANGP03950 147 aaKnown RBP5.86□□□□□ -1.47
LRRC28-215ENST00000559774 MIAQ16674 131 aa5.86□□□□□ -1.47
LRRC28-215ENST00000559774 PAPPA-AS1Q5QFB9 102 aa5.86□□□□□ -1.47
LRRC28-215ENST00000559774 RNASEKQ6P5S7 137 aaKnown RBP5.86□□□□□ -1.47
LRRC28-215ENST00000559774 BAGE3Q86Y29 109 aa5.86□□□□□ -1.47
LRRC28-215ENST00000559774 ZNF664Q8N3J9 261 aa5.86□□□□□ -1.47
LRRC28-215ENST00000559774 Q8N976 141 aa5.86□□□□□ -1.47
LRRC28-215ENST00000559774 DEFB104AQ8WTQ1 72 aa5.86□□□□□ -1.47
LRRC28-215ENST00000559774 TIMM17AQ99595 171 aa5.86□□□□□ -1.47
LRRC28-215ENST00000559774 CDC42SE2Q9NRR3 84 aa5.86□□□□□ -1.47
LRRC28-215ENST00000559774 KLK12Q9UKR0 248 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms