RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 NXPH4O95158 308 aa3.92□□□□□ -1.78
USP3-215ENST00000559771 SRIP30626 198 aa3.92□□□□□ -1.78
USP3-215ENST00000559771 CRYBA4P53673 196 aa3.92□□□□□ -1.78
USP3-215ENST00000559771 GNG5P63218 68 aa3.92□□□□□ -1.78
USP3-215ENST00000559771 PRR27Q6MZM9 219 aa3.92□□□□□ -1.78
USP3-215ENST00000559771 MRPL54Q6P161 138 aaKnown RBP3.92□□□□□ -1.78
USP3-215ENST00000559771 LYPD5Q6UWN5 251 aa3.92□□□□□ -1.78
USP3-215ENST00000559771 C9orf47Q6ZRZ4 202 aa3.92□□□□□ -1.78
USP3-215ENST00000559771 GOLT1AQ6ZVE7 132 aa3.92□□□□□ -1.78
USP3-215ENST00000559771 EXOC3-AS1Q8N2X6 119 aa3.92□□□□□ -1.78
USP3-215ENST00000559771 C18orf32Q8TCD1 76 aa3.92□□□□□ -1.78
USP3-215ENST00000559771 VGLL1Q99990 258 aa3.92□□□□□ -1.78
USP3-215ENST00000559771 ALKBH7Q9BT30 221 aaPredicted RBP3.92□□□□□ -1.78
USP3-215ENST00000559771 TRGV2A0A075B6R0 118 aa3.91□□□□□ -1.78
USP3-215ENST00000559771 A0A087WTM6 91 aa3.91□□□□□ -1.78
USP3-215ENST00000559771 IGKV2-40A0A087WW87 121 aaPredicted RBP3.91□□□□□ -1.78
USP3-215ENST00000559771 F2Z2F3 143 aa3.91□□□□□ -1.78
USP3-215ENST00000559771 NUPR1O60356 82 aa3.91□□□□□ -1.78
USP3-215ENST00000559771 HSBP1O75506 76 aa3.91□□□□□ -1.78
USP3-215ENST00000559771 IGKV2D-40P01614 121 aaPredicted RBP3.91□□□□□ -1.78
USP3-215ENST00000559771 IGHV3-53P01767 116 aa3.91□□□□□ -1.78
USP3-215ENST00000559771 INAFM2P0DMQ5 153 aa3.91□□□□□ -1.78
USP3-215ENST00000559771 GYPEP15421 78 aa3.91□□□□□ -1.78
USP3-215ENST00000559771 MALP21145 153 aa3.91□□□□□ -1.78
USP3-215ENST00000559771 RNASE4P34096 147 aaKnown RBP3.91□□□□□ -1.78
USP3-215ENST00000559771 AMTP48728 403 aa3.91□□□□□ -1.78
USP3-215ENST00000559771 SLAQ13239 276 aa3.91□□□□□ -1.78
USP3-215ENST00000559771 GAGE13Q4V321 117 aa3.91□□□□□ -1.78
USP3-215ENST00000559771 Q5VSD8 79 aa3.91□□□□□ -1.78
USP3-215ENST00000559771 PRNTQ86SH4 94 aa3.91□□□□□ -1.78
USP3-215ENST00000559771 WFDC10BQ8IUB3 73 aa3.91□□□□□ -1.78
USP3-215ENST00000559771 OR2D3Q8NGH3 330 aa3.91□□□□□ -1.78
USP3-215ENST00000559771 GTSF1Q8WW33 167 aa3.91□□□□□ -1.78
USP3-215ENST00000559771 C14orf144Q96I85 54 aa3.91□□□□□ -1.78
USP3-215ENST00000559771 LINC00477Q96M19 166 aa3.91□□□□□ -1.78
USP3-215ENST00000559771 MIEN1Q9BRT3 115 aa3.91□□□□□ -1.78
USP3-215ENST00000559771 C2orf88Q9BSF0 95 aa3.91□□□□□ -1.78
USP3-215ENST00000559771 VAMP8Q9BV40 100 aa3.91□□□□□ -1.78
USP3-215ENST00000559771 MRPL16Q9NX20 251 aaKnown RBP3.91□□□□□ -1.78
USP3-215ENST00000559771 LENEPQ9Y5L5 61 aa3.91□□□□□ -1.78
USP3-215ENST00000559771 PPBPP02775 128 aa3.9□□□□□ -1.79
USP3-215ENST00000559771 CAMPP49913 170 aa3.9□□□□□ -1.79
USP3-215ENST00000559771 Q8TAT8 98 aa3.9□□□□□ -1.79
USP3-215ENST00000559771 ZC2HC1AQ96GY0 325 aa3.9□□□□□ -1.79
USP3-215ENST00000559771 PGLYRP4Q96LB8 373 aa3.9□□□□□ -1.79
USP3-215ENST00000559771 CNFNQ9BYD5 112 aa3.9□□□□□ -1.79
USP3-215ENST00000559771 MDFICQ9P1T7 246 aa3.9□□□□□ -1.79
USP3-215ENST00000559771 PRO0255Q9UI72 69 aa3.9□□□□□ -1.79
USP3-215ENST00000559771 HSPB8Q9UJY1 196 aa3.9□□□□□ -1.79
USP3-215ENST00000559771 RPH3ALQ9UNE2 315 aa3.9□□□□□ -1.79
USP3-215ENST00000559771 HHLA3Q9XRX5 114 aa3.9□□□□□ -1.79
USP3-215ENST00000559771 LAMTOR2Q9Y2Q5 125 aa3.9□□□□□ -1.79
USP3-215ENST00000559771 ICOSQ9Y6W8 199 aa3.9□□□□□ -1.79
USP3-215ENST00000559771 DMBT1Q9UGM3 2413 aaPredicted RBP3.9□□□□□ -1.79
USP3-215ENST00000559771 IGHV1OR15-1A0A075B7D0 117 aa3.89□□□□□ -1.79
USP3-215ENST00000559771 TRAV8-1A0A0A6YYK1 113 aa3.89□□□□□ -1.79
USP3-215ENST00000559771 TRBV7-9A0A0J9YWB2 115 aa3.89□□□□□ -1.79
USP3-215ENST00000559771 LRCOL1A6NCL2 159 aa3.89□□□□□ -1.79
USP3-215ENST00000559771 FABP5P3A8MUU1 101 aa3.89□□□□□ -1.79
USP3-215ENST00000559771 K7EQD1 137 aa3.89□□□□□ -1.79
USP3-215ENST00000559771 M0R143 59 aa3.89□□□□□ -1.79
USP3-215ENST00000559771 SMR3BP02814 79 aaPredicted RBP3.89□□□□□ -1.79
USP3-215ENST00000559771 LINC00614P0C842 121 aa3.89□□□□□ -1.79
USP3-215ENST00000559771 CTRLP40313 264 aa3.89□□□□□ -1.79
USP3-215ENST00000559771 SSTP61278 116 aa3.89□□□□□ -1.79
USP3-215ENST00000559771 HAMPP81172 84 aa3.89□□□□□ -1.79
USP3-215ENST00000559771 KIAA1644Q3SXP7 199 aa3.89□□□□□ -1.79
USP3-215ENST00000559771 NIT1Q86X76 327 aa3.89□□□□□ -1.79
USP3-215ENST00000559771 ZNF479Q96JC4 524 aa3.89□□□□□ -1.79
USP3-215ENST00000559771 LOC100131303A0A0U1RQF7 123 aa3.88□□□□□ -1.79
USP3-215ENST00000559771 C3orf79P0CE67 100 aa3.88□□□□□ -1.79
USP3-215ENST00000559771 CRIP1P50238 77 aa3.88□□□□□ -1.79
USP3-215ENST00000559771 ZNF138P52744 262 aa3.88□□□□□ -1.79
USP3-215ENST00000559771 KRTDAPP60985 99 aa3.88□□□□□ -1.79
USP3-215ENST00000559771 MRPL23Q16540 153 aaKnown RBP3.88□□□□□ -1.79
USP3-215ENST00000559771 MUC21Q5SSG8 566 aa3.88□□□□□ -1.79
USP3-215ENST00000559771 PET117Q6UWS5 81 aa3.88□□□□□ -1.79
USP3-215ENST00000559771 NEGR1Q7Z3B1 354 aa3.88□□□□□ -1.79
USP3-215ENST00000559771 RASL10AQ92737 203 aa3.88□□□□□ -1.79
USP3-215ENST00000559771 SGK494Q96LW2 274 aa3.88□□□□□ -1.79
USP3-215ENST00000559771 TMEM70Q9BUB7 260 aa3.88□□□□□ -1.79
USP3-215ENST00000559771 PRO1933Q9H354 126 aa3.88□□□□□ -1.79
USP3-215ENST00000559771 MSRB1Q9NZV6 116 aa3.88□□□□□ -1.79
USP3-215ENST00000559771 FAM30AQ9NZY2 134 aa3.88□□□□□ -1.79
USP3-215ENST00000559771 UQCR10Q9UDW1 63 aa3.88□□□□□ -1.79
USP3-215ENST00000559771 FLG2Q5D862 2391 aaPredicted RBP3.87□□□□□ -1.79
USP3-215ENST00000559771 TRAV9-2A0A087WT02 112 aa3.87□□□□□ -1.79
USP3-215ENST00000559771 SH2D1AO60880 128 aa3.87□□□□□ -1.79
USP3-215ENST00000559771 LEPROTL1O95214 131 aa3.87□□□□□ -1.79
USP3-215ENST00000559771 IGLC6P0CF74 106 aa3.87□□□□□ -1.79
USP3-215ENST00000559771 GCSHP23434 173 aa3.87□□□□□ -1.79
USP3-215ENST00000559771 ZNF415Q09FC8 603 aa3.87□□□□□ -1.79
USP3-215ENST00000559771 TMEM78Q5T7P6 136 aa3.87□□□□□ -1.79
USP3-215ENST00000559771 FAM104BQ5XKR9 115 aa3.87□□□□□ -1.79
USP3-215ENST00000559771 RNASEKQ6P5S7 137 aaKnown RBP3.87□□□□□ -1.79
USP3-215ENST00000559771 NFE4Q86UQ8 179 aa3.87□□□□□ -1.79
USP3-215ENST00000559771 ORMDL3Q8N138 153 aa3.87□□□□□ -1.79
USP3-215ENST00000559771 Q8N976 141 aa3.87□□□□□ -1.79
USP3-215ENST00000559771 FER1L6-AS1Q8NA97 138 aa3.87□□□□□ -1.79
USP3-215ENST00000559771 OR10AG1Q8NH19 301 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms