RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 CHCHD7Q9BUK0 85 aa13.64□□□□□ -0.23
TSPAN3-207ENST00000559494 GAGE6Q13070 117 aa13.63□□□□□ -0.23
TSPAN3-207ENST00000559494 NFE4Q86UQ8 179 aa13.63□□□□□ -0.23
TSPAN3-207ENST00000559494 PMCHP20382 165 aa13.62□□□□□ -0.23
TSPAN3-207ENST00000559494 CKS2P33552 79 aa13.62□□□□□ -0.23
TSPAN3-207ENST00000559494 MPV17L2Q567V2 206 aa13.62□□□□□ -0.23
TSPAN3-207ENST00000559494 TMEM243Q9BU79 118 aa13.62□□□□□ -0.23
TSPAN3-207ENST00000559494 KLK12Q9UKR0 248 aa13.62□□□□□ -0.23
TSPAN3-207ENST00000559494 A0A1B0GVY2 172 aa13.61□□□□□ -0.23
TSPAN3-207ENST00000559494 I3L3M4 83 aa13.61□□□□□ -0.23
TSPAN3-207ENST00000559494 PPP1R17O96001 155 aa13.61□□□□□ -0.23
TSPAN3-207ENST00000559494 S100PP25815 95 aa13.61□□□□□ -0.23
TSPAN3-207ENST00000559494 HECTD4Q9Y4D8 3996 aa13.6□□□□□ -0.23
TSPAN3-207ENST00000559494 TRAV9-1A0A075B6T8 112 aa13.6□□□□□ -0.23
TSPAN3-207ENST00000559494 TRBV27A0A0K0K1C4 114 aa13.6□□□□□ -0.23
TSPAN3-207ENST00000559494 D6R8Y8 96 aa13.6□□□□□ -0.23
TSPAN3-207ENST00000559494 AMTP48728 403 aa13.6□□□□□ -0.23
TSPAN3-207ENST00000559494 LAGE3Q14657 143 aa13.6□□□□□ -0.23
TSPAN3-207ENST00000559494 Q8N976 141 aa13.6□□□□□ -0.23
TSPAN3-207ENST00000559494 Q9HAA7 133 aa13.6□□□□□ -0.23
TSPAN3-207ENST00000559494 BIRC6Q9NR09 4857 aa13.6□□□□□ -0.23
TSPAN3-207ENST00000559494 TRBV24-1A0A075B6N3 115 aa13.59□□□□□ -0.23
TSPAN3-207ENST00000559494 PKIAP61925 76 aa13.59□□□□□ -0.23
TSPAN3-207ENST00000559494 SUMO2P61956 95 aaKnown RBP13.59□□□□□ -0.23
TSPAN3-207ENST00000559494 RBX1P62877 108 aa13.59□□□□□ -0.23
TSPAN3-207ENST00000559494 VCYO14598 125 aa13.58□□□□□ -0.24
TSPAN3-207ENST00000559494 TNFRSF6BO95407 300 aa13.58□□□□□ -0.24
TSPAN3-207ENST00000559494 TSHBP01222 138 aa13.58□□□□□ -0.24
TSPAN3-207ENST00000559494 ELOBQ15370 118 aa13.58□□□□□ -0.24
TSPAN3-207ENST00000559494 PPBPP02775 128 aa13.57□□□□□ -0.24
TSPAN3-207ENST00000559494 TMEM136Q6ZRR5 245 aa13.57□□□□□ -0.24
TSPAN3-207ENST00000559494 C20orf78Q9BR46 151 aa13.57□□□□□ -0.24
TSPAN3-207ENST00000559494 TRAV8-3A0A0A6YYJ7 113 aa13.56□□□□□ -0.24
TSPAN3-207ENST00000559494 TGIF2-C20orf24A0A0A6YYL0 155 aa13.56□□□□□ -0.24
TSPAN3-207ENST00000559494 NPYP01303 97 aa13.56□□□□□ -0.24
TSPAN3-207ENST00000559494 APCSP02743 223 aa13.56□□□□□ -0.24
TSPAN3-207ENST00000559494 PKHD1P08F94 4074 aa13.56□□□□□ -0.24
TSPAN3-207ENST00000559494 DYNC1H1Q14204 4646 aaKnown RBP13.56□□□□□ -0.24
TSPAN3-207ENST00000559494 ANGP03950 147 aaKnown RBP13.55□□□□□ -0.24
TSPAN3-207ENST00000559494 ESDP10768 282 aa13.55□□□□□ -0.24
TSPAN3-207ENST00000559494 ENHOQ6UWT2 76 aa13.55□□□□□ -0.24
TSPAN3-207ENST00000559494 ORMDL3Q8N138 153 aa13.55□□□□□ -0.24
TSPAN3-207ENST00000559494 UBE2WQ96B02 151 aa13.55□□□□□ -0.24
TSPAN3-207ENST00000559494 IGLV4-60A0A075B6I1 120 aa13.54□□□□□ -0.24
TSPAN3-207ENST00000559494 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.54□□□□□ -0.24
TSPAN3-207ENST00000559494 A0A1B0GUV1 79 aa13.54□□□□□ -0.24
TSPAN3-207ENST00000559494 IGKV2-29A2NJV5 120 aaPredicted RBP13.54□□□□□ -0.24
TSPAN3-207ENST00000559494 PHOX2AO14813 284 aa13.54□□□□□ -0.24
TSPAN3-207ENST00000559494 UBE2L6O14933 153 aa13.54□□□□□ -0.24
TSPAN3-207ENST00000559494 CBLN2Q8IUK8 224 aa13.54□□□□□ -0.24
TSPAN3-207ENST00000559494 C20orf203Q8NBC4 194 aa13.54□□□□□ -0.24
TSPAN3-207ENST00000559494 PRELID3AQ96N28 172 aa13.54□□□□□ -0.24
TSPAN3-207ENST00000559494 YPEL4Q96NS1 127 aa13.54□□□□□ -0.24
TSPAN3-207ENST00000559494 RPL32P62910 135 aaKnown RBP13.53□□□□□ -0.24
TSPAN3-207ENST00000559494 H7C423 109 aa13.51□□□□□ -0.25
TSPAN3-207ENST00000559494 Q0VG73 95 aa13.51□□□□□ -0.25
TSPAN3-207ENST00000559494 LINC00269Q8N2A0 174 aa13.51□□□□□ -0.25
TSPAN3-207ENST00000559494 TM2D2Q9BX73 214 aa13.51□□□□□ -0.25
TSPAN3-207ENST00000559494 PRR34Q9NV39 138 aa13.51□□□□□ -0.25
TSPAN3-207ENST00000559494 PSCAO43653 123 aa13.5□□□□□ -0.25
TSPAN3-207ENST00000559494 KIR2DL4Q99706 377 aa13.5□□□□□ -0.25
TSPAN3-207ENST00000559494 SMIM2Q9BVW6 85 aa13.5□□□□□ -0.25
TSPAN3-207ENST00000559494 SMCO4Q9NRQ5 59 aa13.5□□□□□ -0.25
TSPAN3-207ENST00000559494 A0A087WTM6 91 aa13.49□□□□□ -0.25
TSPAN3-207ENST00000559494 FGF6P10767 208 aa13.49□□□□□ -0.25
TSPAN3-207ENST00000559494 FCER1GP30273 86 aa13.49□□□□□ -0.25
TSPAN3-207ENST00000559494 KIAA1644Q3SXP7 199 aa13.49□□□□□ -0.25
TSPAN3-207ENST00000559494 MAPKAPK5-AS1Q8N8E1 139 aa13.49□□□□□ -0.25
TSPAN3-207ENST00000559494 GNB1LQ9BYB4 327 aa13.49□□□□□ -0.25
TSPAN3-207ENST00000559494 IGKV2D-24A0A075B6R9 120 aa13.48□□□□□ -0.25
TSPAN3-207ENST00000559494 LRCOL1A6NCL2 159 aa13.48□□□□□ -0.25
TSPAN3-207ENST00000559494 PRSS47A8MTI9 375 aa13.48□□□□□ -0.25
TSPAN3-207ENST00000559494 HLA-DQA1P01909 254 aa13.48□□□□□ -0.25
TSPAN3-207ENST00000559494 CRPP02741 224 aa13.48□□□□□ -0.25
TSPAN3-207ENST00000559494 AMMECR1LQ6DCA0 310 aa13.48□□□□□ -0.25
TSPAN3-207ENST00000559494 CLPSL2Q6UWE3 100 aa13.48□□□□□ -0.25
TSPAN3-207ENST00000559494 RMI2Q96E14 147 aa13.48□□□□□ -0.25
TSPAN3-207ENST00000559494 LAMTOR2Q9Y2Q5 125 aa13.48□□□□□ -0.25
TSPAN3-207ENST00000559494 RNASEKQ6P5S7 137 aaKnown RBP13.47□□□□□ -0.25
TSPAN3-207ENST00000559494 REG3AQ06141 175 aa13.46□□□□□ -0.25
TSPAN3-207ENST00000559494 MIAQ16674 131 aa13.46□□□□□ -0.25
TSPAN3-207ENST00000559494 COX19Q49B96 90 aa13.46□□□□□ -0.25
TSPAN3-207ENST00000559494 COX11Q9Y6N1 276 aa13.46□□□□□ -0.25
TSPAN3-207ENST00000559494 LOC389332A0A1B0GUA5 103 aa13.45□□□□□ -0.26
TSPAN3-207ENST00000559494 TCAPO15273 167 aa13.45□□□□□ -0.26
TSPAN3-207ENST00000559494 SCO1O75880 301 aa13.45□□□□□ -0.26
TSPAN3-207ENST00000559494 KRTAP10-2P60368 255 aa13.45□□□□□ -0.26
TSPAN3-207ENST00000559494 SPATA12Q7Z6I5 190 aa13.45□□□□□ -0.26
TSPAN3-207ENST00000559494 MRPL18Q9H0U6 180 aaKnown RBP13.45□□□□□ -0.26
TSPAN3-207ENST00000559494 DNAH5Q8TE73 4624 aa13.45□□□□□ -0.26
TSPAN3-207ENST00000559494 MRPL52Q86TS9 123 aaKnown RBP13.44□□□□□ -0.26
TSPAN3-207ENST00000559494 C1orf43Q9BWL3 253 aa13.44□□□□□ -0.26
TSPAN3-207ENST00000559494 MAP1LC3AQ9H492 121 aa13.44□□□□□ -0.26
TSPAN3-207ENST00000559494 ATP6V1G1O75348 118 aa13.43□□□□□ -0.26
TSPAN3-207ENST00000559494 MT-ND6P03923 174 aa13.43□□□□□ -0.26
TSPAN3-207ENST00000559494 ZNF25P17030 456 aaPredicted RBP13.43□□□□□ -0.26
TSPAN3-207ENST00000559494 WFDC2Q14508 124 aa13.43□□□□□ -0.26
TSPAN3-207ENST00000559494 KRTAP26-1Q6PEX3 210 aa13.43□□□□□ -0.26
TSPAN3-207ENST00000559494 EREGO14944 169 aa13.42□□□□□ -0.26
TSPAN3-207ENST00000559494 FABP9Q0Z7S8 132 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms