RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 UBE2WQ96B02 151 aa12.45□□□□□ -0.42
CASC4-209ENST00000559222 MRAP2Q96G30 205 aa12.45□□□□□ -0.42
CASC4-209ENST00000559222 TMEM243Q9BU79 118 aa12.45□□□□□ -0.42
CASC4-209ENST00000559222 CHCHD7Q9BUK0 85 aa12.45□□□□□ -0.42
CASC4-209ENST00000559222 LRP1BQ9NZR2 4599 aa12.44□□□□□ -0.42
CASC4-209ENST00000559222 MT-ND4LP03901 98 aa12.44□□□□□ -0.42
CASC4-209ENST00000559222 AMTP48728 403 aa12.44□□□□□ -0.42
CASC4-209ENST00000559222 HBBP68871 147 aa12.44□□□□□ -0.42
CASC4-209ENST00000559222 COTL1Q14019 142 aa12.44□□□□□ -0.42
CASC4-209ENST00000559222 KCNIP4Q6PIL6 250 aa12.44□□□□□ -0.42
CASC4-209ENST00000559222 ANAPC16Q96DE5 110 aa12.44□□□□□ -0.42
CASC4-209ENST00000559222 KIAA1109Q2LD37 5005 aa12.44□□□□□ -0.42
CASC4-209ENST00000559222 IGLV4-60A0A075B6I1 120 aa12.43□□□□□ -0.42
CASC4-209ENST00000559222 ANGP03950 147 aaKnown RBP12.43□□□□□ -0.42
CASC4-209ENST00000559222 TMEM70Q9BUB7 260 aa12.43□□□□□ -0.42
CASC4-209ENST00000559222 TMEM242Q9NWH2 141 aa12.43□□□□□ -0.42
CASC4-209ENST00000559222 TRAV8-3A0A0A6YYJ7 113 aa12.42□□□□□ -0.42
CASC4-209ENST00000559222 PSCAO43653 123 aa12.42□□□□□ -0.42
CASC4-209ENST00000559222 TSHBP01222 138 aa12.42□□□□□ -0.42
CASC4-209ENST00000559222 C20orf203Q8NBC4 194 aa12.42□□□□□ -0.42
CASC4-209ENST00000559222 SEC11CQ9BY50 192 aa12.42□□□□□ -0.42
CASC4-209ENST00000559222 ST20Q9HBF5 79 aa12.42□□□□□ -0.42
CASC4-209ENST00000559222 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.41□□□□□ -0.42
CASC4-209ENST00000559222 A0A1B0GW15 77 aa12.41□□□□□ -0.42
CASC4-209ENST00000559222 IGKV2-29A2NJV5 120 aaPredicted RBP12.41□□□□□ -0.42
CASC4-209ENST00000559222 C16orf90A8MZG2 172 aa12.41□□□□□ -0.42
CASC4-209ENST00000559222 POLR2KP53803 58 aaKnown RBP12.41□□□□□ -0.42
CASC4-209ENST00000559222 IGKV2D-24A0A075B6R9 120 aa12.4□□□□□ -0.42
CASC4-209ENST00000559222 LECT2O14960 151 aa12.4□□□□□ -0.42
CASC4-209ENST00000559222 C10orf91Q5T1B1 145 aa12.4□□□□□ -0.42
CASC4-209ENST00000559222 I3L3M4 83 aa12.39□□□□□ -0.43
CASC4-209ENST00000559222 PMCHP20382 165 aa12.39□□□□□ -0.43
CASC4-209ENST00000559222 ELOBQ15370 118 aa12.39□□□□□ -0.43
CASC4-209ENST00000559222 ATP5L2Q7Z4Y8 100 aa12.39□□□□□ -0.43
CASC4-209ENST00000559222 LINC00269Q8N2A0 174 aa12.39□□□□□ -0.43
CASC4-209ENST00000559222 D6R8Y8 96 aa12.38□□□□□ -0.43
CASC4-209ENST00000559222 APCSP02743 223 aa12.38□□□□□ -0.43
CASC4-209ENST00000559222 BAALCQ8WXS3 180 aa12.38□□□□□ -0.43
CASC4-209ENST00000559222 TRBV27A0A0K0K1C4 114 aa12.37□□□□□ -0.43
CASC4-209ENST00000559222 NPYP01303 97 aa12.37□□□□□ -0.43
CASC4-209ENST00000559222 CRPP02741 224 aa12.37□□□□□ -0.43
CASC4-209ENST00000559222 CKS2P33552 79 aa12.37□□□□□ -0.43
CASC4-209ENST00000559222 PKIAP61925 76 aa12.37□□□□□ -0.43
CASC4-209ENST00000559222 SUMO2P61956 95 aaKnown RBP12.37□□□□□ -0.43
CASC4-209ENST00000559222 TM2D2Q9BX73 214 aa12.37□□□□□ -0.43
CASC4-209ENST00000559222 PRR34Q9NV39 138 aa12.37□□□□□ -0.43
CASC4-209ENST00000559222 CARHSP1Q9Y2V2 147 aaKnown RBP12.37□□□□□ -0.43
CASC4-209ENST00000559222 UBE2L6O14933 153 aa12.36□□□□□ -0.43
CASC4-209ENST00000559222 S100A8P05109 93 aa12.36□□□□□ -0.43
CASC4-209ENST00000559222 ESDP10768 282 aa12.36□□□□□ -0.43
CASC4-209ENST00000559222 APOBP04114 4563 aaKnown RBP12.35□□□□□ -0.43
CASC4-209ENST00000559222 EREGO14944 169 aa12.35□□□□□ -0.43
CASC4-209ENST00000559222 TNFRSF6BO95407 300 aa12.35□□□□□ -0.43
CASC4-209ENST00000559222 KRTAP26-1Q6PEX3 210 aa12.35□□□□□ -0.43
CASC4-209ENST00000559222 Q8N814 137 aa12.35□□□□□ -0.43
CASC4-209ENST00000559222 IGLV10-54A0A075B6I4 117 aa12.34□□□□□ -0.43
CASC4-209ENST00000559222 A0A1B0GUV1 79 aa12.34□□□□□ -0.43
CASC4-209ENST00000559222 C7orf77A4D0Y5 90 aa12.34□□□□□ -0.43
CASC4-209ENST00000559222 REG3AQ06141 175 aa12.34□□□□□ -0.43
CASC4-209ENST00000559222 Q0VG73 95 aa12.34□□□□□ -0.43
CASC4-209ENST00000559222 BTF3L4Q96K17 158 aa12.34□□□□□ -0.43
CASC4-209ENST00000559222 FGF6P10767 208 aa12.33□□□□□ -0.44
CASC4-209ENST00000559222 CLRN3Q8NCR9 226 aa12.33□□□□□ -0.44
CASC4-209ENST00000559222 RMI2Q96E14 147 aa12.33□□□□□ -0.44
CASC4-209ENST00000559222 C1orf43Q9BWL3 253 aa12.33□□□□□ -0.44
CASC4-209ENST00000559222 CTDSP1Q9GZU7 261 aa12.33□□□□□ -0.44
CASC4-209ENST00000559222 TRBV24-1A0A075B6N3 115 aa12.32□□□□□ -0.44
CASC4-209ENST00000559222 VCYO14598 125 aa12.32□□□□□ -0.44
CASC4-209ENST00000559222 MIAQ16674 131 aa12.32□□□□□ -0.44
CASC4-209ENST00000559222 RNASEKQ6P5S7 137 aaKnown RBP12.32□□□□□ -0.44
CASC4-209ENST00000559222 IMMP2LQ96T52 175 aa12.32□□□□□ -0.44
CASC4-209ENST00000559222 HLA-DQA1P01909 254 aa12.31□□□□□ -0.44
CASC4-209ENST00000559222 TMEM136Q6ZRR5 245 aa12.31□□□□□ -0.44
CASC4-209ENST00000559222 SMIM2Q9BVW6 85 aa12.31□□□□□ -0.44
CASC4-209ENST00000559222 HSPG2P98160 4391 aa12.31□□□□□ -0.44
CASC4-209ENST00000559222 IGKV3OR2-268A0A0C4DH90 116 aa12.3□□□□□ -0.44
CASC4-209ENST00000559222 PPP1R17O96001 155 aa12.3□□□□□ -0.44
CASC4-209ENST00000559222 KRTAP10-1P60331 282 aa12.3□□□□□ -0.44
CASC4-209ENST00000559222 AMMECR1LQ6DCA0 310 aa12.3□□□□□ -0.44
CASC4-209ENST00000559222 ORMDL3Q8N138 153 aa12.3□□□□□ -0.44
CASC4-209ENST00000559222 PRELID3AQ96N28 172 aa12.3□□□□□ -0.44
CASC4-209ENST00000559222 C20orf78Q9BR46 151 aa12.3□□□□□ -0.44
CASC4-209ENST00000559222 RPS10P5Q9NQ39 176 aa12.3□□□□□ -0.44
CASC4-209ENST00000559222 PGPEP1Q9NXJ5 209 aa12.3□□□□□ -0.44
CASC4-209ENST00000559222 COX11Q9Y6N1 276 aa12.3□□□□□ -0.44
CASC4-209ENST00000559222 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.29□□□□□ -0.44
CASC4-209ENST00000559222 FCER1GP30273 86 aa12.29□□□□□ -0.44
CASC4-209ENST00000559222 H7C423 109 aa12.28□□□□□ -0.44
CASC4-209ENST00000559222 RPL32P62910 135 aaKnown RBP12.28□□□□□ -0.44
CASC4-209ENST00000559222 RHEBQ15382 184 aa12.28□□□□□ -0.44
CASC4-209ENST00000559222 IGLV5-52A0A0A0MRZ9 124 aa12.27□□□□□ -0.45
CASC4-209ENST00000559222 TCAPO15273 167 aa12.27□□□□□ -0.45
CASC4-209ENST00000559222 APOC3P02656 99 aa12.27□□□□□ -0.45
CASC4-209ENST00000559222 PPBPP02775 128 aa12.27□□□□□ -0.45
CASC4-209ENST00000559222 CDPF1Q6NVV7 123 aa12.27□□□□□ -0.45
CASC4-209ENST00000559222 KIR2DL4Q99706 377 aa12.27□□□□□ -0.45
CASC4-209ENST00000559222 PHOX2AO14813 284 aa12.26□□□□□ -0.45
CASC4-209ENST00000559222 RPL39P62891 51 aaKnown RBP12.26□□□□□ -0.45
CASC4-209ENST00000559222 KIAA1644Q3SXP7 199 aa12.26□□□□□ -0.45
CASC4-209ENST00000559222 MRPL52Q86TS9 123 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms