RNA–Protein interactions for RNA: ENST00000559080.1

CHRNA3-205, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 535 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-205ENST00000559080 NIT2Q9NQR4 276 aa7.35□□□□□ -1.23
CHRNA3-205ENST00000559080 A8MWL6 223 aa7.34□□□□□ -1.23
CHRNA3-205ENST00000559080 RBX1P62877 108 aa7.34□□□□□ -1.23
CHRNA3-205ENST00000559080 CLPSL2Q6UWE3 100 aa7.34□□□□□ -1.23
CHRNA3-205ENST00000559080 FAM231DQ6ZW35 169 aa7.34□□□□□ -1.23
CHRNA3-205ENST00000559080 SCXQ7RTU7 201 aa7.34□□□□□ -1.23
CHRNA3-205ENST00000559080 TMEM243Q9BU79 118 aa7.34□□□□□ -1.23
CHRNA3-205ENST00000559080 UBE2L6O14933 153 aa7.33□□□□□ -1.24
CHRNA3-205ENST00000559080 COTL1Q14019 142 aa7.33□□□□□ -1.24
CHRNA3-205ENST00000559080 CT83Q5H943 113 aa7.33□□□□□ -1.24
CHRNA3-205ENST00000559080 LINC00269Q8N2A0 174 aa7.33□□□□□ -1.24
CHRNA3-205ENST00000559080 GTSF1Q8WW33 167 aa7.33□□□□□ -1.24
CHRNA3-205ENST00000559080 BORCS7Q96B45 105 aa7.33□□□□□ -1.24
CHRNA3-205ENST00000559080 PGLYRP4Q96LB8 373 aa7.33□□□□□ -1.24
CHRNA3-205ENST00000559080 FAM210AQ96ND0 272 aa7.33□□□□□ -1.24
CHRNA3-205ENST00000559080 A0A1B0GVG6 124 aa7.32□□□□□ -1.24
CHRNA3-205ENST00000559080 NDUFS6O75380 124 aaKnown RBP7.32□□□□□ -1.24
CHRNA3-205ENST00000559080 AMTP48728 403 aa7.32□□□□□ -1.24
CHRNA3-205ENST00000559080 PRR34Q9NV39 138 aa7.32□□□□□ -1.24
CHRNA3-205ENST00000559080 TRAV26-2A0A0B4J265 109 aa7.31□□□□□ -1.24
CHRNA3-205ENST00000559080 ZNF727A8MUV8 499 aa7.31□□□□□ -1.24
CHRNA3-205ENST00000559080 USP17L23D6RBM5 183 aa7.31□□□□□ -1.24
CHRNA3-205ENST00000559080 LINC01620Q4KN68 170 aa7.31□□□□□ -1.24
CHRNA3-205ENST00000559080 LINC01551Q86U37 167 aa7.31□□□□□ -1.24
CHRNA3-205ENST00000559080 GATD1Q8NB37 220 aa7.31□□□□□ -1.24
CHRNA3-205ENST00000559080 REG3AQ06141 175 aa7.3□□□□□ -1.24
CHRNA3-205ENST00000559080 TEX261Q6UWH6 196 aa7.3□□□□□ -1.24
CHRNA3-205ENST00000559080 C20orf203Q8NBC4 194 aa7.3□□□□□ -1.24
CHRNA3-205ENST00000559080 A0A1B0GUT8 65 aa7.29□□□□□ -1.24
CHRNA3-205ENST00000559080 A0A1B0GUV1 79 aa7.29□□□□□ -1.24
CHRNA3-205ENST00000559080 HIGD1CA8MV81 97 aa7.29□□□□□ -1.24
CHRNA3-205ENST00000559080 SRP19P09132 144 aaKnown RBP7.29□□□□□ -1.24
CHRNA3-205ENST00000559080 CIRBP-AS1Q8TBR5 109 aa7.29□□□□□ -1.24
CHRNA3-205ENST00000559080 TSKUQ8WUA8 353 aa7.29□□□□□ -1.24
CHRNA3-205ENST00000559080 RPL39LQ96EH5 51 aaKnown RBP7.29□□□□□ -1.24
CHRNA3-205ENST00000559080 CHAC1Q9BUX1 264 aa7.29□□□□□ -1.24
CHRNA3-205ENST00000559080 IGLV4-60A0A075B6I1 120 aa7.28□□□□□ -1.24
CHRNA3-205ENST00000559080 IGLV10-54A0A075B6I4 117 aa7.28□□□□□ -1.24
CHRNA3-205ENST00000559080 TRAV8-4A0A0B4J246 113 aa7.28□□□□□ -1.24
CHRNA3-205ENST00000559080 NCR2O95944 276 aa7.28□□□□□ -1.24
CHRNA3-205ENST00000559080 APCSP02743 223 aa7.28□□□□□ -1.24
CHRNA3-205ENST00000559080 MT1HL1P0DM35 61 aa7.28□□□□□ -1.24
CHRNA3-205ENST00000559080 HNRNPA3P51991 378 aaKnown RBP7.28□□□□□ -1.24
CHRNA3-205ENST00000559080 FOXA3P55318 350 aaPredicted RBP7.28□□□□□ -1.24
CHRNA3-205ENST00000559080 GFRA4Q9GZZ7 299 aa7.28□□□□□ -1.24
CHRNA3-205ENST00000559080 OSTCQ9NRP0 149 aa7.28□□□□□ -1.24
CHRNA3-205ENST00000559080 FAM231BA6NCW3 169 aa7.27□□□□□ -1.25
CHRNA3-205ENST00000559080 SDHAF1A6NFY7 115 aa7.27□□□□□ -1.25
CHRNA3-205ENST00000559080 AMMECR1LQ6DCA0 310 aa7.27□□□□□ -1.25
CHRNA3-205ENST00000559080 PRSS1P07477 247 aa7.26□□□□□ -1.25
CHRNA3-205ENST00000559080 FAM74A3Q4VXF1 159 aa7.26□□□□□ -1.25
CHRNA3-205ENST00000559080 KRTAP26-1Q6PEX3 210 aa7.26□□□□□ -1.25
CHRNA3-205ENST00000559080 TMEM191AQ9H0A3 160 aa7.26□□□□□ -1.25
CHRNA3-205ENST00000559080 PKHD1L1Q86WI1 4243 aa7.25□□□□□ -1.25
CHRNA3-205ENST00000559080 IGKV3OR2-268A0A0C4DH90 116 aa7.25□□□□□ -1.25
CHRNA3-205ENST00000559080 TRBV6-5A0A0K0K1A5 114 aa7.25□□□□□ -1.25
CHRNA3-205ENST00000559080 PMCHP20382 165 aa7.25□□□□□ -1.25
CHRNA3-205ENST00000559080 RIGQ13278 110 aa7.25□□□□□ -1.25
CHRNA3-205ENST00000559080 PEA15Q15121 130 aa7.25□□□□□ -1.25
CHRNA3-205ENST00000559080 ADIRFQ15847 76 aa7.25□□□□□ -1.25
CHRNA3-205ENST00000559080 TMEM241Q24JQ0 296 aa7.25□□□□□ -1.25
CHRNA3-205ENST00000559080 DGAT2L7PQ6IED9 249 aa7.25□□□□□ -1.25
CHRNA3-205ENST00000559080 RNASEKQ6P5S7 137 aaKnown RBP7.25□□□□□ -1.25
CHRNA3-205ENST00000559080 CLRN3Q8NCR9 226 aa7.25□□□□□ -1.25
CHRNA3-205ENST00000559080 ISOC2Q96AB3 205 aa7.25□□□□□ -1.25
CHRNA3-205ENST00000559080 MRAP2Q96G30 205 aa7.25□□□□□ -1.25
CHRNA3-205ENST00000559080 ST20Q9HBF5 79 aa7.25□□□□□ -1.25
CHRNA3-205ENST00000559080 RNF213Q63HN8 5207 aa7.25□□□□□ -1.25
CHRNA3-205ENST00000559080 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.24□□□□□ -1.25
CHRNA3-205ENST00000559080 hDV102S1A0JD36 115 aa7.24□□□□□ -1.25
CHRNA3-205ENST00000559080 IGKV2-29A2NJV5 120 aaPredicted RBP7.24□□□□□ -1.25
CHRNA3-205ENST00000559080 H7C423 109 aa7.24□□□□□ -1.25
CHRNA3-205ENST00000559080 I3L3M4 83 aa7.24□□□□□ -1.25
CHRNA3-205ENST00000559080 RPL23P62829 140 aaKnown RBP7.24□□□□□ -1.25
CHRNA3-205ENST00000559080 BTF3L4Q96K17 158 aa7.24□□□□□ -1.25
CHRNA3-205ENST00000559080 AP5S1Q9NUS5 200 aa7.24□□□□□ -1.25
CHRNA3-205ENST00000559080 NAT8Q9UHE5 227 aa7.24□□□□□ -1.25
CHRNA3-205ENST00000559080 NAT8BQ9UHF3 227 aa7.24□□□□□ -1.25
CHRNA3-205ENST00000559080 V9GYV3 84 aa7.24□□□□□ -1.25
CHRNA3-205ENST00000559080 FGF6P10767 208 aa7.23□□□□□ -1.25
CHRNA3-205ENST00000559080 ZNF25P17030 456 aaPredicted RBP7.23□□□□□ -1.25
CHRNA3-205ENST00000559080 AMN1Q8IY45 258 aa7.23□□□□□ -1.25
CHRNA3-205ENST00000559080 NUP35Q8NFH5 326 aa7.23□□□□□ -1.25
CHRNA3-205ENST00000559080 TMEM101Q96IK0 257 aa7.23□□□□□ -1.25
CHRNA3-205ENST00000559080 SMDT1Q9H4I9 107 aa7.23□□□□□ -1.25
CHRNA3-205ENST00000559080 TMEM242Q9NWH2 141 aa7.23□□□□□ -1.25
CHRNA3-205ENST00000559080 LRP2P98164 4655 aa7.22□□□□□ -1.25
CHRNA3-205ENST00000559080 RAB4AP20338 218 aa7.22□□□□□ -1.25
CHRNA3-205ENST00000559080 C9orf163Q8N9P6 203 aa7.22□□□□□ -1.25
CHRNA3-205ENST00000559080 RNF185Q96GF1 192 aa7.22□□□□□ -1.25
CHRNA3-205ENST00000559080 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.21□□□□□ -1.26
CHRNA3-205ENST00000559080 GAGE12HA6NDE8 117 aa7.21□□□□□ -1.26
CHRNA3-205ENST00000559080 C9JQL5 133 aa7.21□□□□□ -1.26
CHRNA3-205ENST00000559080 GAS8-AS1O95177 125 aa7.21□□□□□ -1.26
CHRNA3-205ENST00000559080 PPP1R17O96001 155 aa7.21□□□□□ -1.26
CHRNA3-205ENST00000559080 TSHBP01222 138 aa7.21□□□□□ -1.26
CHRNA3-205ENST00000559080 RPS10P46783 165 aaKnown RBP7.21□□□□□ -1.26
CHRNA3-205ENST00000559080 RPL37AP61513 92 aaKnown RBP7.21□□□□□ -1.26
CHRNA3-205ENST00000559080 CNBPP62633 177 aaKnown RBP7.21□□□□□ -1.26
CHRNA3-205ENST00000559080 CFAP161Q6P656 301 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms