RNA–Protein interactions for RNA: ENST00000558989.1

SPG11-214, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 1,816 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-214ENST00000558989 RPL18AQ02543 176 aaKnown RBP6.57□□□□□ -1.36
SPG11-214ENST00000558989 ZNF56Q15929 161 aa6.57□□□□□ -1.36
SPG11-214ENST00000558989 DNLZQ5SXM8 178 aa6.57□□□□□ -1.36
SPG11-214ENST00000558989 CBLN2Q8IUK8 224 aa6.57□□□□□ -1.36
SPG11-214ENST00000558989 ATP6V0E2Q8NHE4 81 aa6.57□□□□□ -1.36
SPG11-214ENST00000558989 SCRT2Q9NQ03 307 aa6.57□□□□□ -1.36
SPG11-214ENST00000558989 IGHV3-30P01768 117 aa6.56□□□□□ -1.36
SPG11-214ENST00000558989 IGHV3-33P01772 117 aa6.56□□□□□ -1.36
SPG11-214ENST00000558989 IGHV3-30-3P0DP02 117 aa6.56□□□□□ -1.36
SPG11-214ENST00000558989 IGHV3-30-5P0DP03 117 aa6.56□□□□□ -1.36
SPG11-214ENST00000558989 ZFP2Q6ZN57 461 aa6.56□□□□□ -1.36
SPG11-214ENST00000558989 PKD1P98161 4303 aa6.56□□□□□ -1.36
SPG11-214ENST00000558989 TSTD3H0UI37 97 aa6.55□□□□□ -1.36
SPG11-214ENST00000558989 CRYGDP07320 174 aa6.55□□□□□ -1.36
SPG11-214ENST00000558989 UFSP1Q6NVU6 142 aa6.55□□□□□ -1.36
SPG11-214ENST00000558989 EIF5A2Q9GZV4 153 aaKnown RBP6.55□□□□□ -1.36
SPG11-214ENST00000558989 TRAV8-6A0A0B4J262 113 aa6.55□□□□□ -1.36
SPG11-214ENST00000558989 P01737 135 aa6.55□□□□□ -1.36
SPG11-214ENST00000558989 EVI2AP22794 236 aa6.55□□□□□ -1.36
SPG11-214ENST00000558989 FUSP35637 526 aaKnown RBP eCLIP6.55□□□□□ -1.36
SPG11-214ENST00000558989 RPL24P83731 157 aaKnown RBP6.55□□□□□ -1.36
SPG11-214ENST00000558989 C4orf26Q17RF5 130 aa6.55□□□□□ -1.36
SPG11-214ENST00000558989 Q8N3U1 123 aa6.55□□□□□ -1.36
SPG11-214ENST00000558989 RNASE7Q9H1E1 156 aaKnown RBP6.55□□□□□ -1.36
SPG11-214ENST00000558989 GTSF1LQ9H1H1 148 aa6.55□□□□□ -1.36
SPG11-214ENST00000558989 IGHV3-38A0A0C4DH36 116 aa6.54□□□□□ -1.36
SPG11-214ENST00000558989 C19orf71A6NCJ1 209 aa6.54□□□□□ -1.36
SPG11-214ENST00000558989 MGPP08493 103 aa6.54□□□□□ -1.36
SPG11-214ENST00000558989 SH2D6Q7Z4S9 175 aa6.54□□□□□ -1.36
SPG11-214ENST00000558989 FER1L6-AS1Q8NA97 138 aa6.54□□□□□ -1.36
SPG11-214ENST00000558989 MRAP2Q96G30 205 aa6.54□□□□□ -1.36
SPG11-214ENST00000558989 PKHD1P08F94 4074 aa6.54□□□□□ -1.36
SPG11-214ENST00000558989 TRAV9-2A0A087WT02 112 aa6.53□□□□□ -1.36
SPG11-214ENST00000558989 IGLV9-49A0A0B4J1Y8 123 aa6.53□□□□□ -1.36
SPG11-214ENST00000558989 A6NDN8 102 aa6.53□□□□□ -1.36
SPG11-214ENST00000558989 MED14OSP0DP75 135 aa6.53□□□□□ -1.36
SPG11-214ENST00000558989 KIAA1109Q2LD37 5005 aa6.53□□□□□ -1.36
SPG11-214ENST00000558989 SMIM17P0DL12 118 aa6.53□□□□□ -1.36
SPG11-214ENST00000558989 TMEM97Q5BJF2 176 aa6.53□□□□□ -1.36
SPG11-214ENST00000558989 LELP1Q5T871 98 aa6.53□□□□□ -1.36
SPG11-214ENST00000558989 LYZL1Q6UWQ5 148 aa6.53□□□□□ -1.36
SPG11-214ENST00000558989 SPATA12Q7Z6I5 190 aa6.53□□□□□ -1.36
SPG11-214ENST00000558989 GATD1Q8NB37 220 aa6.53□□□□□ -1.36
SPG11-214ENST00000558989 C2orf48Q96LS8 159 aa6.53□□□□□ -1.36
SPG11-214ENST00000558989 CXCL1P09341 107 aa6.52□□□□□ -1.37
SPG11-214ENST00000558989 DNAH10OSP0CZ25 163 aa6.52□□□□□ -1.37
SPG11-214ENST00000558989 AMTP48728 403 aa6.52□□□□□ -1.37
SPG11-214ENST00000558989 RPS20P60866 119 aaKnown RBP6.52□□□□□ -1.37
SPG11-214ENST00000558989 DNAH11Q96DT5 4516 aa6.52□□□□□ -1.37
SPG11-214ENST00000558989 DYNC1H1Q14204 4646 aaKnown RBP6.51□□□□□ -1.37
SPG11-214ENST00000558989 C16orf90A8MZG2 172 aa6.51□□□□□ -1.37
SPG11-214ENST00000558989 IGLC6P0CF74 106 aa6.51□□□□□ -1.37
SPG11-214ENST00000558989 RPL36AP83881 106 aaKnown RBP6.51□□□□□ -1.37
SPG11-214ENST00000558989 DEFB104AQ8WTQ1 72 aa6.51□□□□□ -1.37
SPG11-214ENST00000558989 RPL36ALQ969Q0 106 aaKnown RBP6.51□□□□□ -1.37
SPG11-214ENST00000558989 AP1S3Q96PC3 154 aa6.51□□□□□ -1.37
SPG11-214ENST00000558989 BIN3Q9NQY0 253 aa6.51□□□□□ -1.37
SPG11-214ENST00000558989 TGIF2-C20orf24A0A0A6YYL0 155 aa6.5□□□□□ -1.37
SPG11-214ENST00000558989 LINC00694P0DN24 101 aa6.5□□□□□ -1.37
SPG11-214ENST00000558989 Q6ZRN7 208 aaPredicted RBP6.5□□□□□ -1.37
SPG11-214ENST00000558989 SMIM12Q96EX1 92 aa6.5□□□□□ -1.37
SPG11-214ENST00000558989 SMIM7Q9BQ49 75 aa6.5□□□□□ -1.37
SPG11-214ENST00000558989 RPP21Q9H633 154 aaKnown RBP6.5□□□□□ -1.37
SPG11-214ENST00000558989 PRO0628Q9UI54 55 aa6.5□□□□□ -1.37
SPG11-214ENST00000558989 ZNF727A8MUV8 499 aa6.5□□□□□ -1.37
SPG11-214ENST00000558989 TMEM250H0YL14 139 aa6.5□□□□□ -1.37
SPG11-214ENST00000558989 TCAPO15273 167 aa6.5□□□□□ -1.37
SPG11-214ENST00000558989 NTF3P20783 257 aa6.5□□□□□ -1.37
SPG11-214ENST00000558989 KRTAP10-2P60368 255 aa6.5□□□□□ -1.37
SPG11-214ENST00000558989 DAZ4Q86SG3 579 aaKnown RBP6.5□□□□□ -1.37
SPG11-214ENST00000558989 DAZ3Q9NR90 486 aaKnown RBP6.5□□□□□ -1.37
SPG11-214ENST00000558989 TRBV7-3A0A075B6L6 115 aa6.49□□□□□ -1.37
SPG11-214ENST00000558989 PSCAO43653 123 aa6.49□□□□□ -1.37
SPG11-214ENST00000558989 SRP19P09132 144 aaKnown RBP6.49□□□□□ -1.37
SPG11-214ENST00000558989 ERVFC1-1P60608 527 aa6.49□□□□□ -1.37
SPG11-214ENST00000558989 TWIST1Q15672 202 aa6.49□□□□□ -1.37
SPG11-214ENST00000558989 LINC01556Q5JQF7 62 aa6.49□□□□□ -1.37
SPG11-214ENST00000558989 TEX261Q6UWH6 196 aa6.49□□□□□ -1.37
SPG11-214ENST00000558989 C10orf126Q8N4M7 172 aa6.49□□□□□ -1.37
SPG11-214ENST00000558989 URB1-AS1Q96HZ7 61 aa6.49□□□□□ -1.37
SPG11-214ENST00000558989 LINC00587B1AMM8 73 aa6.48□□□□□ -1.37
SPG11-214ENST00000558989 UBE2D3P61077 147 aa6.48□□□□□ -1.37
SPG11-214ENST00000558989 UBE2D2P62837 147 aa6.48□□□□□ -1.37
SPG11-214ENST00000558989 CACNG7P62955 275 aa6.48□□□□□ -1.37
SPG11-214ENST00000558989 NFE4Q86UQ8 179 aa6.48□□□□□ -1.37
SPG11-214ENST00000558989 BTF3L4Q96K17 158 aa6.48□□□□□ -1.37
SPG11-214ENST00000558989 PGLYRP4Q96LB8 373 aa6.48□□□□□ -1.37
SPG11-214ENST00000558989 KIF25-AS1Q9Y6Z4 181 aa6.48□□□□□ -1.37
SPG11-214ENST00000558989 TRBV10-1A0A0K0K1A3 114 aa6.48□□□□□ -1.37
SPG11-214ENST00000558989 FAM240AA0A1B0GVK7 77 aa6.48□□□□□ -1.37
SPG11-214ENST00000558989 A0A1B0GWB2 263 aa6.48□□□□□ -1.37
SPG11-214ENST00000558989 TMEM262E9PQX1 116 aa6.48□□□□□ -1.37
SPG11-214ENST00000558989 LINC00242Q5T6M2 205 aa6.48□□□□□ -1.37
SPG11-214ENST00000558989 SUMO4Q6EEV6 95 aa6.48□□□□□ -1.37
SPG11-214ENST00000558989 DNAJC30Q96LL9 226 aa6.48□□□□□ -1.37
SPG11-214ENST00000558989 IBA57-AS1B1ANH7 110 aa6.47□□□□□ -1.37
SPG11-214ENST00000558989 C9JQL5 133 aa6.47□□□□□ -1.37
SPG11-214ENST00000558989 F2Z2F3 143 aa6.47□□□□□ -1.37
SPG11-214ENST00000558989 F8W036 122 aa6.47□□□□□ -1.37
SPG11-214ENST00000558989 TRGC1P0CF51 173 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms