RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 ELOBQ15370 118 aa4.8□□□□□ -1.64
SPG11-213ENST00000558988 MPV17L2Q567V2 206 aa4.8□□□□□ -1.64
SPG11-213ENST00000558988 CENPWQ5EE01 88 aa4.8□□□□□ -1.64
SPG11-213ENST00000558988 TMUB2Q71RG4 321 aa4.8□□□□□ -1.64
SPG11-213ENST00000558988 COX8CQ7Z4L0 72 aa4.8□□□□□ -1.64
SPG11-213ENST00000558988 Q8N976 141 aa4.8□□□□□ -1.64
SPG11-213ENST00000558988 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.8□□□□□ -1.64
SPG11-213ENST00000558988 NEXN-AS1Q8NBZ9 246 aa4.8□□□□□ -1.64
SPG11-213ENST00000558988 DEFB104AQ8WTQ1 72 aa4.8□□□□□ -1.64
SPG11-213ENST00000558988 MBD3L1Q8WWY6 194 aa4.8□□□□□ -1.64
SPG11-213ENST00000558988 TRBV6-8A0A0A6YYG3 113 aa4.79□□□□□ -1.64
SPG11-213ENST00000558988 EIF5AP63241 154 aaKnown RBP4.79□□□□□ -1.64
SPG11-213ENST00000558988 GAGE6Q13070 117 aa4.79□□□□□ -1.64
SPG11-213ENST00000558988 C10orf25Q5T742 122 aa4.79□□□□□ -1.64
SPG11-213ENST00000558988 SCXQ7RTU7 201 aa4.79□□□□□ -1.64
SPG11-213ENST00000558988 OR2D3Q8NGH3 330 aa4.79□□□□□ -1.64
SPG11-213ENST00000558988 AP1S3Q96PC3 154 aa4.79□□□□□ -1.64
SPG11-213ENST00000558988 DYNC1H1Q14204 4646 aaKnown RBP4.78□□□□□ -1.64
SPG11-213ENST00000558988 RAB19A4D1S5 217 aa4.78□□□□□ -1.64
SPG11-213ENST00000558988 HMSDA8MTL9 139 aa4.78□□□□□ -1.64
SPG11-213ENST00000558988 IGLV2-8P01709 118 aa4.78□□□□□ -1.64
SPG11-213ENST00000558988 OR5AL1P0C617 328 aa4.78□□□□□ -1.64
SPG11-213ENST00000558988 Q0VG73 95 aa4.78□□□□□ -1.64
SPG11-213ENST00000558988 WDR73Q6P4I2 378 aa4.78□□□□□ -1.64
SPG11-213ENST00000558988 ENHOQ6UWT2 76 aa4.78□□□□□ -1.64
SPG11-213ENST00000558988 FER1L6-AS1Q8NA97 138 aa4.78□□□□□ -1.64
SPG11-213ENST00000558988 CHCHD7Q9BUK0 85 aa4.78□□□□□ -1.64
SPG11-213ENST00000558988 MANBALQ9NQG1 85 aa4.78□□□□□ -1.64
SPG11-213ENST00000558988 DMBT1Q9UGM3 2413 aaPredicted RBP4.77□□□□□ -1.65
SPG11-213ENST00000558988 IGLV10-54A0A075B6I4 117 aa4.77□□□□□ -1.65
SPG11-213ENST00000558988 TRBV25-1A0A075B6N4 114 aa4.77□□□□□ -1.65
SPG11-213ENST00000558988 SNAI2O43623 268 aa4.77□□□□□ -1.65
SPG11-213ENST00000558988 C1QBP02746 253 aa4.77□□□□□ -1.65
SPG11-213ENST00000558988 GNG4P50150 75 aa4.77□□□□□ -1.65
SPG11-213ENST00000558988 RAB5CP51148 216 aa4.77□□□□□ -1.65
SPG11-213ENST00000558988 NKX2-5P52952 324 aaPredicted RBP4.77□□□□□ -1.65
SPG11-213ENST00000558988 ATRAIDQ6UW56 229 aa4.77□□□□□ -1.65
SPG11-213ENST00000558988 Q6ZSA8 131 aa4.77□□□□□ -1.65
SPG11-213ENST00000558988 NTM-AS1Q6ZSK4 140 aa4.77□□□□□ -1.65
SPG11-213ENST00000558988 OR10G8Q8NGN5 311 aa4.77□□□□□ -1.65
SPG11-213ENST00000558988 MED9Q9NWA0 146 aa4.77□□□□□ -1.65
SPG11-213ENST00000558988 HSPG2P98160 4391 aa4.76□□□□□ -1.65
SPG11-213ENST00000558988 IGKV3OR2-268A0A0C4DH90 116 aa4.76□□□□□ -1.65
SPG11-213ENST00000558988 TEX46H3BTG2 121 aa4.76□□□□□ -1.65
SPG11-213ENST00000558988 IFNA1P01562 189 aa4.76□□□□□ -1.65
SPG11-213ENST00000558988 P01737 135 aa4.76□□□□□ -1.65
SPG11-213ENST00000558988 CXCL1P09341 107 aa4.76□□□□□ -1.65
SPG11-213ENST00000558988 RBX1P62877 108 aa4.76□□□□□ -1.65
SPG11-213ENST00000558988 C14orf177Q52M58 125 aa4.76□□□□□ -1.65
SPG11-213ENST00000558988 LINC00269Q8N2A0 174 aa4.76□□□□□ -1.65
SPG11-213ENST00000558988 CIRBP-AS1Q8TBR5 109 aa4.76□□□□□ -1.65
SPG11-213ENST00000558988 C11orf52Q96A22 123 aa4.76□□□□□ -1.65
SPG11-213ENST00000558988 IGHV1-24A0A0C4DH33 117 aa4.75□□□□□ -1.65
SPG11-213ENST00000558988 H7C1H1 209 aa4.75□□□□□ -1.65
SPG11-213ENST00000558988 RPS20P60866 119 aaKnown RBP4.75□□□□□ -1.65
SPG11-213ENST00000558988 PKIAP61925 76 aa4.75□□□□□ -1.65
SPG11-213ENST00000558988 MEF2BQ02080 365 aaPredicted RBP4.75□□□□□ -1.65
SPG11-213ENST00000558988 MIAQ16674 131 aa4.75□□□□□ -1.65
SPG11-213ENST00000558988 TMEM97Q5BJF2 176 aa4.75□□□□□ -1.65
SPG11-213ENST00000558988 EIF5AL1Q6IS14 154 aaKnown RBP4.75□□□□□ -1.65
SPG11-213ENST00000558988 LYZL1Q6UWQ5 148 aa4.75□□□□□ -1.65
SPG11-213ENST00000558988 CHAC1Q9BUX1 264 aa4.75□□□□□ -1.65
SPG11-213ENST00000558988 KIF25-AS1Q9Y6Z4 181 aa4.75□□□□□ -1.65
SPG11-213ENST00000558988 TRBV20OR9-2A0A075B6H5 130 aa4.74□□□□□ -1.65
SPG11-213ENST00000558988 hDV102S1A0JD36 115 aa4.74□□□□□ -1.65
SPG11-213ENST00000558988 XKRY2A2RUG3 117 aa4.74□□□□□ -1.65
SPG11-213ENST00000558988 M0QY20 66 aa4.74□□□□□ -1.65
SPG11-213ENST00000558988 UBE2L6O14933 153 aa4.74□□□□□ -1.65
SPG11-213ENST00000558988 PDE6DO43924 150 aa4.74□□□□□ -1.65
SPG11-213ENST00000558988 PRSS1P07477 247 aa4.74□□□□□ -1.65
SPG11-213ENST00000558988 TRGC1P0CF51 173 aa4.74□□□□□ -1.65
SPG11-213ENST00000558988 IGLC6P0CF74 106 aa4.74□□□□□ -1.65
SPG11-213ENST00000558988 BCL2P10415 239 aa4.74□□□□□ -1.65
SPG11-213ENST00000558988 AMTP48728 403 aa4.74□□□□□ -1.65
SPG11-213ENST00000558988 SULT1A2P50226 295 aa4.74□□□□□ -1.65
SPG11-213ENST00000558988 CEBPGP53567 150 aa4.74□□□□□ -1.65
SPG11-213ENST00000558988 CACNG7P62955 275 aa4.74□□□□□ -1.65
SPG11-213ENST00000558988 REG3AQ06141 175 aa4.74□□□□□ -1.65
SPG11-213ENST00000558988 LCE1FQ5T754 118 aa4.74□□□□□ -1.65
SPG11-213ENST00000558988 TMEM243Q9BU79 118 aa4.74□□□□□ -1.65
SPG11-213ENST00000558988 LRP1BQ9NZR2 4599 aa4.73□□□□□ -1.65
SPG11-213ENST00000558988 IGLV4-60A0A075B6I1 120 aa4.73□□□□□ -1.65
SPG11-213ENST00000558988 A0A0A0MQY5 61 aa4.73□□□□□ -1.65
SPG11-213ENST00000558988 TRAV1-1A0A0B4J248 108 aa4.73□□□□□ -1.65
SPG11-213ENST00000558988 TRAV26-2A0A0B4J265 109 aa4.73□□□□□ -1.65
SPG11-213ENST00000558988 C19orf71A6NCJ1 209 aa4.73□□□□□ -1.65
SPG11-213ENST00000558988 NTF3P20783 257 aa4.73□□□□□ -1.65
SPG11-213ENST00000558988 RASL11AQ6T310 242 aa4.73□□□□□ -1.65
SPG11-213ENST00000558988 DPH3Q96FX2 82 aa4.73□□□□□ -1.65
SPG11-213ENST00000558988 RNASE7Q9H1E1 156 aaKnown RBP4.73□□□□□ -1.65
SPG11-213ENST00000558988 DPH3P1Q9H4G8 78 aa4.73□□□□□ -1.65
SPG11-213ENST00000558988 VAX2Q9UIW0 290 aa4.73□□□□□ -1.65
SPG11-213ENST00000558988 A0A087WYN8 130 aa4.72□□□□□ -1.65
SPG11-213ENST00000558988 F2Z2F3 143 aa4.72□□□□□ -1.65
SPG11-213ENST00000558988 VPREB1P12018 145 aa4.72□□□□□ -1.65
SPG11-213ENST00000558988 RPL37AP61513 92 aaKnown RBP4.72□□□□□ -1.65
SPG11-213ENST00000558988 COTL1Q14019 142 aa4.72□□□□□ -1.65
SPG11-213ENST00000558988 IQCJQ1A5X6 159 aa4.72□□□□□ -1.65
SPG11-213ENST00000558988 C20orf203Q8NBC4 194 aa4.72□□□□□ -1.65
SPG11-213ENST00000558988 RPL39LQ96EH5 51 aaKnown RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms