RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 LTAP01374 205 aa6.1□□□□□ -1.43
SPG11-212ENST00000558790 UBE2G1P62253 170 aa6.1□□□□□ -1.43
SPG11-212ENST00000558790 GAGE6Q13070 117 aa6.1□□□□□ -1.43
SPG11-212ENST00000558790 SPACA4Q8TDM5 124 aa6.1□□□□□ -1.43
SPG11-212ENST00000558790 IGHV3-64A0A075B6Q5 118 aa6.09□□□□□ -1.43
SPG11-212ENST00000558790 PHOX2AO14813 284 aa6.09□□□□□ -1.43
SPG11-212ENST00000558790 DEFA3P59666 94 aa6.09□□□□□ -1.43
SPG11-212ENST00000558790 RPL7L1Q6DKI1 246 aaKnown RBP6.09□□□□□ -1.43
SPG11-212ENST00000558790 VAX2Q9UIW0 290 aa6.09□□□□□ -1.43
SPG11-212ENST00000558790 TRBV25-1A0A075B6N4 114 aa6.08□□□□□ -1.44
SPG11-212ENST00000558790 MUC21A0A0G2JKD1 596 aa6.08□□□□□ -1.44
SPG11-212ENST00000558790 TRBV6-1A0A0K0K1D8 114 aa6.08□□□□□ -1.44
SPG11-212ENST00000558790 MUC21A0A140T8X8 626 aa6.08□□□□□ -1.44
SPG11-212ENST00000558790 REG3AQ06141 175 aa6.08□□□□□ -1.44
SPG11-212ENST00000558790 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.08□□□□□ -1.44
SPG11-212ENST00000558790 RNF185Q96GF1 192 aa6.08□□□□□ -1.44
SPG11-212ENST00000558790 DERL1Q9BUN8 251 aa6.08□□□□□ -1.44
SPG11-212ENST00000558790 NKX6-2Q9C056 277 aaPredicted RBP6.08□□□□□ -1.44
SPG11-212ENST00000558790 ALG5Q9Y673 324 aa6.08□□□□□ -1.44
SPG11-212ENST00000558790 IGLV5-37A0A075B6J1 123 aa6.07□□□□□ -1.44
SPG11-212ENST00000558790 MAP1LC3B2A6NCE7 125 aa6.07□□□□□ -1.44
SPG11-212ENST00000558790 SNAI2O43623 268 aa6.07□□□□□ -1.44
SPG11-212ENST00000558790 AKR1C3P42330 323 aa6.07□□□□□ -1.44
SPG11-212ENST00000558790 IQCJQ1A5X6 159 aa6.07□□□□□ -1.44
SPG11-212ENST00000558790 TMEM97Q5BJF2 176 aa6.07□□□□□ -1.44
SPG11-212ENST00000558790 C20orf203Q8NBC4 194 aa6.07□□□□□ -1.44
SPG11-212ENST00000558790 ZNF471Q9BX82 626 aaPredicted RBP6.07□□□□□ -1.44
SPG11-212ENST00000558790 MAP1LC3BQ9GZQ8 125 aa6.07□□□□□ -1.44
SPG11-212ENST00000558790 GFRA4Q9GZZ7 299 aa6.07□□□□□ -1.44
SPG11-212ENST00000558790 KIF25-AS1Q9Y6Z4 181 aa6.07□□□□□ -1.44
SPG11-212ENST00000558790 IGHV1-24A0A0C4DH33 117 aa6.06□□□□□ -1.44
SPG11-212ENST00000558790 CXCL1P09341 107 aa6.06□□□□□ -1.44
SPG11-212ENST00000558790 DEFA1P59665 94 aa6.06□□□□□ -1.44
SPG11-212ENST00000558790 SEC61BP60468 96 aaKnown RBP6.06□□□□□ -1.44
SPG11-212ENST00000558790 SSTP61278 116 aa6.06□□□□□ -1.44
SPG11-212ENST00000558790 PRR3P79522 188 aaKnown RBP6.06□□□□□ -1.44
SPG11-212ENST00000558790 Q5BKY6 102 aa6.06□□□□□ -1.44
SPG11-212ENST00000558790 LINC01600Q96MT4 127 aa6.06□□□□□ -1.44
SPG11-212ENST00000558790 TCEAL7Q9BRU2 100 aa6.06□□□□□ -1.44
SPG11-212ENST00000558790 DPH3P1Q9H4G8 78 aa6.06□□□□□ -1.44
SPG11-212ENST00000558790 PLAC8Q9NZF1 115 aa6.06□□□□□ -1.44
SPG11-212ENST00000558790 IGLV4-60A0A075B6I1 120 aa6.05□□□□□ -1.44
SPG11-212ENST00000558790 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.05□□□□□ -1.44
SPG11-212ENST00000558790 BORCS7-ASMTA0A0B4J1R7 106 aa6.05□□□□□ -1.44
SPG11-212ENST00000558790 PRSS47A8MTI9 375 aa6.05□□□□□ -1.44
SPG11-212ENST00000558790 OR5AL1P0C617 328 aa6.05□□□□□ -1.44
SPG11-212ENST00000558790 RAB5CP51148 216 aa6.05□□□□□ -1.44
SPG11-212ENST00000558790 AKR1C8PQ5T2L2 129 aa6.05□□□□□ -1.44
SPG11-212ENST00000558790 SPANXN1Q5VSR9 72 aa6.05□□□□□ -1.44
SPG11-212ENST00000558790 CST9LP1Q5W188 147 aa6.05□□□□□ -1.44
SPG11-212ENST00000558790 C15orf56Q8N910 161 aa6.05□□□□□ -1.44
SPG11-212ENST00000558790 STOML3Q8TAV4 291 aa6.05□□□□□ -1.44
SPG11-212ENST00000558790 C7orf33Q8WU49 177 aa6.05□□□□□ -1.44
SPG11-212ENST00000558790 DPH3Q96FX2 82 aa6.05□□□□□ -1.44
SPG11-212ENST00000558790 AP1S3Q96PC3 154 aa6.05□□□□□ -1.44
SPG11-212ENST00000558790 TRAV8-4A0A0B4J246 113 aa6.04□□□□□ -1.44
SPG11-212ENST00000558790 P01737 135 aa6.04□□□□□ -1.44
SPG11-212ENST00000558790 FHITP49789 147 aa6.04□□□□□ -1.44
SPG11-212ENST00000558790 INO80EQ8NBZ0 244 aaPredicted RBP6.04□□□□□ -1.44
SPG11-212ENST00000558790 FXYD6-FXYD2A0A087WZ82 144 aa6.03□□□□□ -1.44
SPG11-212ENST00000558790 IGKV2-24A0A0C4DH68 120 aa6.03□□□□□ -1.44
SPG11-212ENST00000558790 M0QY20 66 aa6.03□□□□□ -1.44
SPG11-212ENST00000558790 MGPP08493 103 aa6.03□□□□□ -1.44
SPG11-212ENST00000558790 SMIM17P0DL12 118 aa6.03□□□□□ -1.44
SPG11-212ENST00000558790 COX6A2Q02221 97 aa6.03□□□□□ -1.44
SPG11-212ENST00000558790 LCE1AQ5T7P2 110 aa6.03□□□□□ -1.44
SPG11-212ENST00000558790 TMEM243Q9BU79 118 aa6.03□□□□□ -1.44
SPG11-212ENST00000558790 FSIP2Q5CZC0 6907 aa6.02□□□□□ -1.45
SPG11-212ENST00000558790 A0A0J9YXV3 536 aa6.02□□□□□ -1.45
SPG11-212ENST00000558790 A0A1B0GUV1 79 aa6.02□□□□□ -1.45
SPG11-212ENST00000558790 GIPP09681 153 aaPredicted RBP6.02□□□□□ -1.45
SPG11-212ENST00000558790 CAMPP49913 170 aa6.02□□□□□ -1.45
SPG11-212ENST00000558790 NKX2-5P52952 324 aaPredicted RBP6.02□□□□□ -1.45
SPG11-212ENST00000558790 MAJINQ3KP22 176 aa6.02□□□□□ -1.45
SPG11-212ENST00000558790 GTSF1Q8WW33 167 aa6.02□□□□□ -1.45
SPG11-212ENST00000558790 MED28Q9H204 178 aa6.02□□□□□ -1.45
SPG11-212ENST00000558790 GZMBP10144 247 aa6.01□□□□□ -1.45
SPG11-212ENST00000558790 HIGD2BQ4VC39 106 aa6.01□□□□□ -1.45
SPG11-212ENST00000558790 BAGE2Q86Y30 109 aa6.01□□□□□ -1.45
SPG11-212ENST00000558790 LYPD6BQ8NI32 183 aa6.01□□□□□ -1.45
SPG11-212ENST00000558790 TPPP3Q9BW30 176 aa6.01□□□□□ -1.45
SPG11-212ENST00000558790 A0A096LNI7 61 aa6□□□□□ -1.45
SPG11-212ENST00000558790 A0A1B0GV50 99 aa6□□□□□ -1.45
SPG11-212ENST00000558790 H7C1H1 209 aa6□□□□□ -1.45
SPG11-212ENST00000558790 NDUFS6O75380 124 aaKnown RBP6□□□□□ -1.45
SPG11-212ENST00000558790 S100A9P06702 114 aaKnown RBP6□□□□□ -1.45
SPG11-212ENST00000558790 SULT1A2P50226 295 aa6□□□□□ -1.45
SPG11-212ENST00000558790 STPG4Q8N801 248 aa6□□□□□ -1.45
SPG11-212ENST00000558790 PGLYRP4Q96LB8 373 aa6□□□□□ -1.45
SPG11-212ENST00000558790 CRCT1Q9UGL9 99 aa6□□□□□ -1.45
SPG11-212ENST00000558790 IGKV3OR2-268A0A0C4DH90 116 aa5.99□□□□□ -1.45
SPG11-212ENST00000558790 G3V3Q6 166 aa5.99□□□□□ -1.45
SPG11-212ENST00000558790 UBE2L6O14933 153 aa5.99□□□□□ -1.45
SPG11-212ENST00000558790 PFDN1O60925 122 aa5.99□□□□□ -1.45
SPG11-212ENST00000558790 IGLC6P0CF74 106 aa5.99□□□□□ -1.45
SPG11-212ENST00000558790 RPS10P46783 165 aaKnown RBP5.99□□□□□ -1.45
SPG11-212ENST00000558790 KRTAP10-8P60410 259 aa5.99□□□□□ -1.45
SPG11-212ENST00000558790 CYTL1Q9NRR1 136 aa5.99□□□□□ -1.45
SPG11-212ENST00000558790 GVQW2A0A096LPI5 108 aaPredicted RBP5.98□□□□□ -1.45
SPG11-212ENST00000558790 RPL35P42766 123 aaKnown RBP5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms