RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 PPP1R17O96001 155 aa5.67□□□□□ -1.5
TPM1-213ENST00000558400 COTL1Q14019 142 aa5.67□□□□□ -1.5
TPM1-213ENST00000558400 NTM-AS1Q6ZSK4 140 aa5.67□□□□□ -1.5
TPM1-213ENST00000558400 GATD1Q8NB37 220 aa5.67□□□□□ -1.5
TPM1-213ENST00000558400 NUP35Q8NFH5 326 aa5.67□□□□□ -1.5
TPM1-213ENST00000558400 NTN5Q8WTR8 489 aaPredicted RBP5.67□□□□□ -1.5
TPM1-213ENST00000558400 UBE2WQ96B02 151 aa5.67□□□□□ -1.5
TPM1-213ENST00000558400 DMBT1Q9UGM3 2413 aaPredicted RBP5.67□□□□□ -1.5
TPM1-213ENST00000558400 A0A1B0GUV1 79 aa5.66□□□□□ -1.5
TPM1-213ENST00000558400 SMIM27A0A1W2PRY6 76 aa5.66□□□□□ -1.5
TPM1-213ENST00000558400 LRCOL1A6NCL2 159 aa5.66□□□□□ -1.5
TPM1-213ENST00000558400 PPP1R2P9O14990 202 aa5.66□□□□□ -1.5
TPM1-213ENST00000558400 NCR2O95944 276 aa5.66□□□□□ -1.5
TPM1-213ENST00000558400 CRPP02741 224 aa5.66□□□□□ -1.5
TPM1-213ENST00000558400 ANGP03950 147 aaKnown RBP5.66□□□□□ -1.5
TPM1-213ENST00000558400 S100A8P05109 93 aa5.66□□□□□ -1.5
TPM1-213ENST00000558400 KRTAP10-2P60368 255 aa5.66□□□□□ -1.5
TPM1-213ENST00000558400 PNRC1Q12796 327 aaPredicted RBP5.66□□□□□ -1.5
TPM1-213ENST00000558400 ATRAIDQ6UW56 229 aa5.66□□□□□ -1.5
TPM1-213ENST00000558400 MRAP2Q96G30 205 aa5.66□□□□□ -1.5
TPM1-213ENST00000558400 TMEM243Q9BU79 118 aa5.66□□□□□ -1.5
TPM1-213ENST00000558400 IGKV2D-24A0A075B6R9 120 aa5.65□□□□□ -1.5
TPM1-213ENST00000558400 TRBV6-5A0A0K0K1A5 114 aa5.65□□□□□ -1.5
TPM1-213ENST00000558400 KRTAP9-6A0A140TA67 174 aa5.65□□□□□ -1.5
TPM1-213ENST00000558400 H7C423 109 aa5.65□□□□□ -1.5
TPM1-213ENST00000558400 UBE2L6O14933 153 aa5.65□□□□□ -1.5
TPM1-213ENST00000558400 CDK2AP2O75956 126 aa5.65□□□□□ -1.5
TPM1-213ENST00000558400 RAB4AP20338 218 aa5.65□□□□□ -1.5
TPM1-213ENST00000558400 MIAQ16674 131 aa5.65□□□□□ -1.5
TPM1-213ENST00000558400 Q8N976 141 aa5.65□□□□□ -1.5
TPM1-213ENST00000558400 C1orf43Q9BWL3 253 aa5.65□□□□□ -1.5
TPM1-213ENST00000558400 ST20Q9HBF5 79 aa5.65□□□□□ -1.5
TPM1-213ENST00000558400 TRAV26-2A0A0B4J265 109 aa5.64□□□□□ -1.51
TPM1-213ENST00000558400 SDHAF1A6NFY7 115 aa5.64□□□□□ -1.51
TPM1-213ENST00000558400 F8W036 122 aa5.64□□□□□ -1.51
TPM1-213ENST00000558400 I3L3M4 83 aa5.64□□□□□ -1.51
TPM1-213ENST00000558400 SCO1O75880 301 aa5.64□□□□□ -1.51
TPM1-213ENST00000558400 MT-ND4LP03901 98 aa5.64□□□□□ -1.51
TPM1-213ENST00000558400 PMCHP20382 165 aa5.64□□□□□ -1.51
TPM1-213ENST00000558400 AMTP48728 403 aa5.64□□□□□ -1.51
TPM1-213ENST00000558400 RBX1P62877 108 aa5.64□□□□□ -1.51
TPM1-213ENST00000558400 GAGE6Q13070 117 aa5.64□□□□□ -1.51
TPM1-213ENST00000558400 MPV17L2Q567V2 206 aa5.64□□□□□ -1.51
TPM1-213ENST00000558400 UQCC3Q6UW78 93 aa5.64□□□□□ -1.51
TPM1-213ENST00000558400 ANAPC16Q96DE5 110 aa5.64□□□□□ -1.51
TPM1-213ENST00000558400 PRR34Q9NV39 138 aa5.64□□□□□ -1.51
TPM1-213ENST00000558400 DNAH17Q9UFH2 4485 aa5.63□□□□□ -1.51
TPM1-213ENST00000558400 UBR4Q5T4S7 5183 aa5.63□□□□□ -1.51
TPM1-213ENST00000558400 TRAV8-4A0A0B4J246 113 aa5.63□□□□□ -1.51
TPM1-213ENST00000558400 VCYO14598 125 aa5.63□□□□□ -1.51
TPM1-213ENST00000558400 GCSHP23434 173 aa5.63□□□□□ -1.51
TPM1-213ENST00000558400 C14orf177Q52M58 125 aa5.63□□□□□ -1.51
TPM1-213ENST00000558400 FAM104BQ5XKR9 115 aa5.63□□□□□ -1.51
TPM1-213ENST00000558400 ENHOQ6UWT2 76 aa5.63□□□□□ -1.51
TPM1-213ENST00000558400 Q8N814 137 aa5.63□□□□□ -1.51
TPM1-213ENST00000558400 RPL39LQ96EH5 51 aaKnown RBP5.63□□□□□ -1.51
TPM1-213ENST00000558400 RNF185Q96GF1 192 aa5.63□□□□□ -1.51
TPM1-213ENST00000558400 IGLV5-52A0A0A0MRZ9 124 aa5.62□□□□□ -1.51
TPM1-213ENST00000558400 APCSP02743 223 aa5.62□□□□□ -1.51
TPM1-213ENST00000558400 ADCYAP1P18509 176 aa5.62□□□□□ -1.51
TPM1-213ENST00000558400 CAMPP49913 170 aa5.62□□□□□ -1.51
TPM1-213ENST00000558400 POLR2KP53803 58 aaKnown RBP5.62□□□□□ -1.51
TPM1-213ENST00000558400 HBBP68871 147 aa5.62□□□□□ -1.51
TPM1-213ENST00000558400 REG3AQ06141 175 aa5.62□□□□□ -1.51
TPM1-213ENST00000558400 AMMECR1LQ6DCA0 310 aa5.62□□□□□ -1.51
TPM1-213ENST00000558400 ATP5L2Q7Z4Y8 100 aa5.62□□□□□ -1.51
TPM1-213ENST00000558400 AMN1Q8IY45 258 aa5.62□□□□□ -1.51
TPM1-213ENST00000558400 LINC00269Q8N2A0 174 aa5.62□□□□□ -1.51
TPM1-213ENST00000558400 TMEM70Q9BUB7 260 aa5.62□□□□□ -1.51
TPM1-213ENST00000558400 TRBV27A0A0K0K1C4 114 aa5.61□□□□□ -1.51
TPM1-213ENST00000558400 TCAPO15273 167 aa5.61□□□□□ -1.51
TPM1-213ENST00000558400 APOC3P02656 99 aa5.61□□□□□ -1.51
TPM1-213ENST00000558400 PPBPP02775 128 aa5.61□□□□□ -1.51
TPM1-213ENST00000558400 ZNF25P17030 456 aaPredicted RBP5.61□□□□□ -1.51
TPM1-213ENST00000558400 CKS2P33552 79 aa5.61□□□□□ -1.51
TPM1-213ENST00000558400 SMAGPQ0VAQ4 97 aa5.61□□□□□ -1.51
TPM1-213ENST00000558400 MAPKAPK5-AS1Q8N8E1 139 aa5.61□□□□□ -1.51
TPM1-213ENST00000558400 BAALCQ8WXS3 180 aa5.61□□□□□ -1.51
TPM1-213ENST00000558400 BTF3L4Q96K17 158 aa5.61□□□□□ -1.51
TPM1-213ENST00000558400 KIR2DL4Q99706 377 aa5.61□□□□□ -1.51
TPM1-213ENST00000558400 C20orf78Q9BR46 151 aa5.61□□□□□ -1.51
TPM1-213ENST00000558400 PKD1P98161 4303 aa5.6□□□□□ -1.51
TPM1-213ENST00000558400 TRBV24-1A0A075B6N3 115 aa5.6□□□□□ -1.51
TPM1-213ENST00000558400 TMEM218A2RU14 115 aa5.6□□□□□ -1.51
TPM1-213ENST00000558400 SUMO2P61956 95 aaKnown RBP5.6□□□□□ -1.51
TPM1-213ENST00000558400 MRPL51Q4U2R6 128 aaKnown RBP5.6□□□□□ -1.51
TPM1-213ENST00000558400 C20orf203Q8NBC4 194 aa5.6□□□□□ -1.51
TPM1-213ENST00000558400 TMEM101Q96IK0 257 aa5.6□□□□□ -1.51
TPM1-213ENST00000558400 IGLV4-60A0A075B6I1 120 aa5.59□□□□□ -1.51
TPM1-213ENST00000558400 A0A1B0GXF2 115 aa5.59□□□□□ -1.51
TPM1-213ENST00000558400 PHOX2AO14813 284 aa5.59□□□□□ -1.51
TPM1-213ENST00000558400 FGF6P10767 208 aa5.59□□□□□ -1.51
TPM1-213ENST00000558400 ESDP10768 282 aa5.59□□□□□ -1.51
TPM1-213ENST00000558400 FCER1GP30273 86 aa5.59□□□□□ -1.51
TPM1-213ENST00000558400 RPS10P46783 165 aaKnown RBP5.59□□□□□ -1.51
TPM1-213ENST00000558400 RPL32P62910 135 aaKnown RBP5.59□□□□□ -1.51
TPM1-213ENST00000558400 MRPL54Q6P161 138 aaKnown RBP5.59□□□□□ -1.51
TPM1-213ENST00000558400 RNASEKQ6P5S7 137 aaKnown RBP5.59□□□□□ -1.51
TPM1-213ENST00000558400 CLRN3Q8NCR9 226 aa5.59□□□□□ -1.51
TPM1-213ENST00000558400 DEFB104AQ8WTQ1 72 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms