RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 AMTP48728 403 aa17.24■□□□□ 0.35
SMAD6-202ENST00000557916 PKIAP61925 76 aa17.24■□□□□ 0.35
SMAD6-202ENST00000557916 SUMO2P61956 95 aaKnown RBP17.24■□□□□ 0.35
SMAD6-202ENST00000557916 LINC00336Q6ZUF6 198 aa17.24■□□□□ 0.35
SMAD6-202ENST00000557916 TMEM243Q9BU79 118 aa17.24■□□□□ 0.35
SMAD6-202ENST00000557916 DNAH17Q9UFH2 4485 aa17.24■□□□□ 0.35
SMAD6-202ENST00000557916 GAGE6Q13070 117 aa17.23■□□□□ 0.35
SMAD6-202ENST00000557916 TRBV24-1A0A075B6N3 115 aa17.22■□□□□ 0.35
SMAD6-202ENST00000557916 TNFRSF6BO95407 300 aa17.22■□□□□ 0.35
SMAD6-202ENST00000557916 TMEM136Q6ZRR5 245 aa17.22■□□□□ 0.35
SMAD6-202ENST00000557916 TRBV27A0A0K0K1C4 114 aa17.21■□□□□ 0.35
SMAD6-202ENST00000557916 VCYO14598 125 aa17.21■□□□□ 0.35
SMAD6-202ENST00000557916 MPV17L2Q567V2 206 aa17.21■□□□□ 0.35
SMAD6-202ENST00000557916 ORMDL3Q8N138 153 aa17.21■□□□□ 0.35
SMAD6-202ENST00000557916 C20orf78Q9BR46 151 aa17.21■□□□□ 0.35
SMAD6-202ENST00000557916 APCSP02743 223 aa17.21■□□□□ 0.34
SMAD6-202ENST00000557916 ATRAIDQ6UW56 229 aa17.21■□□□□ 0.34
SMAD6-202ENST00000557916 NFE4Q86UQ8 179 aa17.21■□□□□ 0.34
SMAD6-202ENST00000557916 PRSS29PA6NIE9 313 aa17.2■□□□□ 0.34
SMAD6-202ENST00000557916 LAGE3Q14657 143 aa17.2■□□□□ 0.34
SMAD6-202ENST00000557916 ELOBQ15370 118 aa17.2■□□□□ 0.34
SMAD6-202ENST00000557916 PRELID3AQ96N28 172 aa17.2■□□□□ 0.34
SMAD6-202ENST00000557916 TSHBP01222 138 aa17.19■□□□□ 0.34
SMAD6-202ENST00000557916 NPYP01303 97 aa17.19■□□□□ 0.34
SMAD6-202ENST00000557916 KLK12Q9UKR0 248 aa17.19■□□□□ 0.34
SMAD6-202ENST00000557916 PHOX2AO14813 284 aa17.18■□□□□ 0.34
SMAD6-202ENST00000557916 UBE2L6O14933 153 aa17.18■□□□□ 0.34
SMAD6-202ENST00000557916 RBX1P62877 108 aa17.18■□□□□ 0.34
SMAD6-202ENST00000557916 Q8N976 141 aa17.18■□□□□ 0.34
SMAD6-202ENST00000557916 Q9HAA7 133 aa17.18■□□□□ 0.34
SMAD6-202ENST00000557916 Q6ZRN7 208 aaPredicted RBP17.17■□□□□ 0.34
SMAD6-202ENST00000557916 HLA-DQA1P01909 254 aa17.16■□□□□ 0.34
SMAD6-202ENST00000557916 RPL32P62910 135 aaKnown RBP17.16■□□□□ 0.34
SMAD6-202ENST00000557916 KIR2DL4Q99706 377 aa17.16■□□□□ 0.34
SMAD6-202ENST00000557916 GNB1LQ9BYB4 327 aa17.16■□□□□ 0.34
SMAD6-202ENST00000557916 TRAV8-3A0A0A6YYJ7 113 aa17.15■□□□□ 0.34
SMAD6-202ENST00000557916 FCER1GP30273 86 aa17.15■□□□□ 0.34
SMAD6-202ENST00000557916 COX19Q49B96 90 aa17.15■□□□□ 0.34
SMAD6-202ENST00000557916 FAT2Q9NYQ8 4349 aa17.15■□□□□ 0.34
SMAD6-202ENST00000557916 ANGP03950 147 aaKnown RBP17.14■□□□□ 0.33
SMAD6-202ENST00000557916 TNP2Q05952 138 aa17.14■□□□□ 0.33
SMAD6-202ENST00000557916 SMIM2Q9BVW6 85 aa17.14■□□□□ 0.33
SMAD6-202ENST00000557916 LAMTOR2Q9Y2Q5 125 aa17.14■□□□□ 0.33
SMAD6-202ENST00000557916 IGKV2D-29A0A075B6S2 120 aaPredicted RBP17.13■□□□□ 0.33
SMAD6-202ENST00000557916 TGIF2-C20orf24A0A0A6YYL0 155 aa17.13■□□□□ 0.33
SMAD6-202ENST00000557916 IGKV2-29A2NJV5 120 aaPredicted RBP17.13■□□□□ 0.33
SMAD6-202ENST00000557916 UBE2WQ96B02 151 aa17.13■□□□□ 0.33
SMAD6-202ENST00000557916 A0A1B0GUV1 79 aa17.13■□□□□ 0.33
SMAD6-202ENST00000557916 ESDP10768 282 aa17.13■□□□□ 0.33
SMAD6-202ENST00000557916 H7C423 109 aa17.12■□□□□ 0.33
SMAD6-202ENST00000557916 KIAA1644Q3SXP7 199 aa17.11■□□□□ 0.33
SMAD6-202ENST00000557916 EPPK1P58107 5090 aaKnown RBP17.1■□□□□ 0.33
SMAD6-202ENST00000557916 MT-ND6P03923 174 aa17.1■□□□□ 0.33
SMAD6-202ENST00000557916 AMMECR1LQ6DCA0 310 aa17.1■□□□□ 0.33
SMAD6-202ENST00000557916 IGLV4-60A0A075B6I1 120 aa17.09■□□□□ 0.33
SMAD6-202ENST00000557916 TCAPO15273 167 aa17.09■□□□□ 0.33
SMAD6-202ENST00000557916 CRPP02741 224 aa17.09■□□□□ 0.33
SMAD6-202ENST00000557916 Q0VG73 95 aa17.09■□□□□ 0.33
SMAD6-202ENST00000557916 ENHOQ6UWT2 76 aa17.09■□□□□ 0.33
SMAD6-202ENST00000557916 LINC00269Q8N2A0 174 aa17.09■□□□□ 0.33
SMAD6-202ENST00000557916 C20orf203Q8NBC4 194 aa17.09■□□□□ 0.33
SMAD6-202ENST00000557916 MAP1LC3AQ9H492 121 aa17.09■□□□□ 0.33
SMAD6-202ENST00000557916 LOC389332A0A1B0GUA5 103 aa17.08■□□□□ 0.32
SMAD6-202ENST00000557916 PRSS47A8MTI9 375 aa17.08■□□□□ 0.32
SMAD6-202ENST00000557916 PSCAO43653 123 aa17.08■□□□□ 0.32
SMAD6-202ENST00000557916 FGF6P10767 208 aa17.08■□□□□ 0.32
SMAD6-202ENST00000557916 RNASEKQ6P5S7 137 aaKnown RBP17.08■□□□□ 0.32
SMAD6-202ENST00000557916 TM2D2Q9BX73 214 aa17.08■□□□□ 0.32
SMAD6-202ENST00000557916 RMI2Q96E14 147 aa17.07■□□□□ 0.32
SMAD6-202ENST00000557916 MRPL18Q9H0U6 180 aaKnown RBP17.07■□□□□ 0.32
SMAD6-202ENST00000557916 SMCO4Q9NRQ5 59 aa17.07■□□□□ 0.32
SMAD6-202ENST00000557916 FABP9Q0Z7S8 132 aa17.06■□□□□ 0.32
SMAD6-202ENST00000557916 PRR34Q9NV39 138 aa17.06■□□□□ 0.32
SMAD6-202ENST00000557916 A0A1B0GVY2 172 aa17.05■□□□□ 0.32
SMAD6-202ENST00000557916 CLPSL2Q6UWE3 100 aa17.05■□□□□ 0.32
SMAD6-202ENST00000557916 CBLN2Q8IUK8 224 aa17.05■□□□□ 0.32
SMAD6-202ENST00000557916 YPEL4Q96NS1 127 aa17.05■□□□□ 0.32
SMAD6-202ENST00000557916 IGKV2D-24A0A075B6R9 120 aa17.04■□□□□ 0.32
SMAD6-202ENST00000557916 ZNF25P17030 456 aaPredicted RBP17.04■□□□□ 0.32
SMAD6-202ENST00000557916 RAB5AP20339 215 aa17.04■□□□□ 0.32
SMAD6-202ENST00000557916 COX11Q9Y6N1 276 aa17.04■□□□□ 0.32
SMAD6-202ENST00000557916 REG3AQ06141 175 aa17.04■□□□□ 0.32
SMAD6-202ENST00000557916 MIAQ16674 131 aa17.04■□□□□ 0.32
SMAD6-202ENST00000557916 TRAPPC1Q9Y5R8 145 aa17.04■□□□□ 0.32
SMAD6-202ENST00000557916 HECTD4Q9Y4D8 3996 aa17.03■□□□□ 0.32
SMAD6-202ENST00000557916 Q8N8P6 123 aa17.03■□□□□ 0.32
SMAD6-202ENST00000557916 TMEM101Q96IK0 257 aa17.03■□□□□ 0.32
SMAD6-202ENST00000557916 MRPL52Q86TS9 123 aaKnown RBP17.02■□□□□ 0.31
SMAD6-202ENST00000557916 TMEM18Q96B42 140 aa17.02■□□□□ 0.31
SMAD6-202ENST00000557916 ALKBH7Q9BT30 221 aaPredicted RBP17.02■□□□□ 0.31
SMAD6-202ENST00000557916 C1orf43Q9BWL3 253 aa17.02■□□□□ 0.31
SMAD6-202ENST00000557916 PKD1P98161 4303 aa17.01■□□□□ 0.31
SMAD6-202ENST00000557916 OR5A1Q8NGJ0 315 aa17.01■□□□□ 0.31
SMAD6-202ENST00000557916 SMAGPQ0VAQ4 97 aa17■□□□□ 0.31
SMAD6-202ENST00000557916 A0A087WTM6 91 aa16.99■□□□□ 0.31
SMAD6-202ENST00000557916 NXT2Q9NPJ8 142 aaKnown RBP16.99■□□□□ 0.31
SMAD6-202ENST00000557916 DGAT2L7PQ6IED9 249 aa16.98■□□□□ 0.31
SMAD6-202ENST00000557916 UBE2D4Q9Y2X8 147 aa16.98■□□□□ 0.31
SMAD6-202ENST00000557916 DNAH11Q96DT5 4516 aa16.98■□□□□ 0.31
SMAD6-202ENST00000557916 EREGO14944 169 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms