RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 NEXN-AS1Q8NBZ9 246 aa5.24□□□□□ -1.57
SPG11-204ENST00000557866 OR4C5Q8NGB2 326 aa5.24□□□□□ -1.57
SPG11-204ENST00000557866 TOMM6Q96B49 74 aa5.24□□□□□ -1.57
SPG11-204ENST00000557866 PAM16Q9Y3D7 125 aa5.24□□□□□ -1.57
SPG11-204ENST00000557866 MAST4O15021 2626 aa5.24□□□□□ -1.57
SPG11-204ENST00000557866 TRAV9-2A0A087WT02 112 aa5.23□□□□□ -1.57
SPG11-204ENST00000557866 hDV102S1A0JD36 115 aa5.23□□□□□ -1.57
SPG11-204ENST00000557866 H7C1H1 209 aa5.23□□□□□ -1.57
SPG11-204ENST00000557866 ATP5LO75964 103 aa5.23□□□□□ -1.57
SPG11-204ENST00000557866 RIPPLY3P57055 190 aa5.23□□□□□ -1.57
SPG11-204ENST00000557866 LGALS9CQ6DKI2 356 aa5.23□□□□□ -1.57
SPG11-204ENST00000557866 LINC00612Q8N6U2 182 aa5.23□□□□□ -1.57
SPG11-204ENST00000557866 VAMP8Q9BV40 100 aa5.23□□□□□ -1.57
SPG11-204ENST00000557866 C20orf202A1L168 122 aa5.22□□□□□ -1.57
SPG11-204ENST00000557866 SMIM9A6NGZ8 99 aa5.22□□□□□ -1.57
SPG11-204ENST00000557866 IGIPA6NJ69 53 aa5.22□□□□□ -1.57
SPG11-204ENST00000557866 G3V4G9 280 aa5.22□□□□□ -1.57
SPG11-204ENST00000557866 I3L3M4 83 aa5.22□□□□□ -1.57
SPG11-204ENST00000557866 EMP1P54849 157 aa5.22□□□□□ -1.57
SPG11-204ENST00000557866 APOC4P55056 127 aa5.22□□□□□ -1.57
SPG11-204ENST00000557866 RPL39P62891 51 aaKnown RBP5.22□□□□□ -1.57
SPG11-204ENST00000557866 ODF1Q14990 250 aa5.22□□□□□ -1.57
SPG11-204ENST00000557866 RHOHQ15669 191 aa5.22□□□□□ -1.57
SPG11-204ENST00000557866 DEFB135Q30KP9 77 aa5.22□□□□□ -1.57
SPG11-204ENST00000557866 SPATA45Q537H7 98 aa5.22□□□□□ -1.57
SPG11-204ENST00000557866 C2orf66Q6UXQ4 117 aa5.22□□□□□ -1.57
SPG11-204ENST00000557866 SCGB3A1Q96QR1 104 aa5.22□□□□□ -1.57
SPG11-204ENST00000557866 KIR2DL4Q99706 377 aa5.22□□□□□ -1.57
SPG11-204ENST00000557866 DKK2Q9UBU2 259 aa5.22□□□□□ -1.57
SPG11-204ENST00000557866 STAB1Q9NY15 2570 aa5.21□□□□□ -1.57
SPG11-204ENST00000557866 TSTD3H0UI37 97 aa5.21□□□□□ -1.58
SPG11-204ENST00000557866 OR11H2Q8NH07 326 aa5.21□□□□□ -1.58
SPG11-204ENST00000557866 DNAJC30Q96LL9 226 aa5.21□□□□□ -1.58
SPG11-204ENST00000557866 ZMAT4Q9H898 229 aa5.21□□□□□ -1.58
SPG11-204ENST00000557866 TP53TG1Q9Y2A0 90 aa5.21□□□□□ -1.58
SPG11-204ENST00000557866 TNFRSF18Q9Y5U5 241 aa5.21□□□□□ -1.58
SPG11-204ENST00000557866 TRGV2A0A075B6R0 118 aa5.2□□□□□ -1.58
SPG11-204ENST00000557866 A0A087WX48 190 aa5.2□□□□□ -1.58
SPG11-204ENST00000557866 IGHV4-28A0A0C4DH34 117 aa5.2□□□□□ -1.58
SPG11-204ENST00000557866 IGHV3-38A0A0C4DH36 116 aa5.2□□□□□ -1.58
SPG11-204ENST00000557866 LOC100131303A0A0U1RQF7 123 aa5.2□□□□□ -1.58
SPG11-204ENST00000557866 A8MZ25 164 aa5.2□□□□□ -1.58
SPG11-204ENST00000557866 K7EQD1 137 aa5.2□□□□□ -1.58
SPG11-204ENST00000557866 DEFB4AO15263 64 aa5.2□□□□□ -1.58
SPG11-204ENST00000557866 PRSS1P07477 247 aa5.2□□□□□ -1.58
SPG11-204ENST00000557866 IGLC3P0DOY3 106 aa5.2□□□□□ -1.58
SPG11-204ENST00000557866 DDTP30046 118 aa5.2□□□□□ -1.58
SPG11-204ENST00000557866 ZC2HC1BQ5TFG8 222 aa5.2□□□□□ -1.58
SPG11-204ENST00000557866 SLC25A29Q8N8R3 303 aa5.2□□□□□ -1.58
SPG11-204ENST00000557866 Q8NAQ8 132 aa5.2□□□□□ -1.58
SPG11-204ENST00000557866 C20orf203Q8NBC4 194 aa5.2□□□□□ -1.58
SPG11-204ENST00000557866 PHLDA1Q8WV24 401 aaPredicted RBP5.2□□□□□ -1.58
SPG11-204ENST00000557866 BAALCQ8WXS3 180 aa5.2□□□□□ -1.58
SPG11-204ENST00000557866 RNF183Q96D59 192 aa5.2□□□□□ -1.58
SPG11-204ENST00000557866 CHCHD7Q9BUK0 85 aa5.2□□□□□ -1.58
SPG11-204ENST00000557866 CYSLTR1Q9Y271 337 aa5.2□□□□□ -1.58
SPG11-204ENST00000557866 COL6A5A8TX70 2615 aa5.19□□□□□ -1.58
SPG11-204ENST00000557866 NACAE9PAV3 2078 aa5.19□□□□□ -1.58
SPG11-204ENST00000557866 TRBV7-3A0A075B6L6 115 aa5.19□□□□□ -1.58
SPG11-204ENST00000557866 TRAV12-1A0A0B4J245 112 aa5.19□□□□□ -1.58
SPG11-204ENST00000557866 TRBV10-1A0A0K0K1A3 114 aa5.19□□□□□ -1.58
SPG11-204ENST00000557866 GAGE12JA6NER3 117 aa5.19□□□□□ -1.58
SPG11-204ENST00000557866 PRSS29PA6NIE9 313 aa5.19□□□□□ -1.58
SPG11-204ENST00000557866 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.19□□□□□ -1.58
SPG11-204ENST00000557866 DEFB130BP0DP73 79 aa5.19□□□□□ -1.58
SPG11-204ENST00000557866 DEFB130AP0DP74 79 aa5.19□□□□□ -1.58
SPG11-204ENST00000557866 UBE2D3P61077 147 aa5.19□□□□□ -1.58
SPG11-204ENST00000557866 UBE2D2P62837 147 aa5.19□□□□□ -1.58
SPG11-204ENST00000557866 GAGE1Q13065 139 aa5.19□□□□□ -1.58
SPG11-204ENST00000557866 GAGE4Q13068 117 aa5.19□□□□□ -1.58
SPG11-204ENST00000557866 GAGE5Q13069 117 aa5.19□□□□□ -1.58
SPG11-204ENST00000557866 FAM222AQ5U5X8 452 aa5.19□□□□□ -1.58
SPG11-204ENST00000557866 ERASQ7Z444 233 aa5.19□□□□□ -1.58
SPG11-204ENST00000557866 STPG4Q8N801 248 aa5.19□□□□□ -1.58
SPG11-204ENST00000557866 ZNRF2Q8NHG8 242 aa5.19□□□□□ -1.58
SPG11-204ENST00000557866 FAM104AQ969W3 186 aa5.19□□□□□ -1.58
SPG11-204ENST00000557866 TIMM17AQ99595 171 aa5.19□□□□□ -1.58
SPG11-204ENST00000557866 OPRPNQ99935 248 aaPredicted RBP5.19□□□□□ -1.58
SPG11-204ENST00000557866 MIEN1Q9BRT3 115 aa5.19□□□□□ -1.58
SPG11-204ENST00000557866 MRPL35Q9NZE8 188 aaKnown RBP5.19□□□□□ -1.58
SPG11-204ENST00000557866 NBEAL2Q6ZNJ1 2754 aa5.18□□□□□ -1.58
SPG11-204ENST00000557866 TRGV4A0A0C4DH28 118 aa5.18□□□□□ -1.58
SPG11-204ENST00000557866 CIDEAO60543 219 aa5.18□□□□□ -1.58
SPG11-204ENST00000557866 LINC00694P0DN24 101 aa5.18□□□□□ -1.58
SPG11-204ENST00000557866 MIFP14174 115 aa5.18□□□□□ -1.58
SPG11-204ENST00000557866 G0S2P27469 103 aa5.18□□□□□ -1.58
SPG11-204ENST00000557866 Q6ZN92 141 aa5.18□□□□□ -1.58
SPG11-204ENST00000557866 NTM-AS1Q6ZSK4 140 aa5.18□□□□□ -1.58
SPG11-204ENST00000557866 TMEM141Q96I45 108 aa5.18□□□□□ -1.58
SPG11-204ENST00000557866 C14orf144Q96I85 54 aa5.18□□□□□ -1.58
SPG11-204ENST00000557866 RETNQ9HD89 108 aa5.18□□□□□ -1.58
SPG11-204ENST00000557866 TP73-AS1Q9UF72 201 aa5.18□□□□□ -1.58
SPG11-204ENST00000557866 CELA1Q9UNI1 258 aa5.18□□□□□ -1.58
SPG11-204ENST00000557866 HHLA3Q9XRX5 114 aa5.18□□□□□ -1.58
SPG11-204ENST00000557866 IGLV4-3A0A075B6K6 122 aa5.17□□□□□ -1.58
SPG11-204ENST00000557866 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.17□□□□□ -1.58
SPG11-204ENST00000557866 TRBV6-4A0A1B0GX49 114 aa5.17□□□□□ -1.58
SPG11-204ENST00000557866 IGKV2-29A2NJV5 120 aaPredicted RBP5.17□□□□□ -1.58
SPG11-204ENST00000557866 LYRM9A8MSI8 78 aa5.17□□□□□ -1.58
SPG11-204ENST00000557866 DPM2O94777 84 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms