RNA–Protein interactions for RNA: ENST00000557765.1

GABRB3-213, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-213ENST00000557765 TOMM6Q96B49 74 aa7.38□□□□□ -1.23
GABRB3-213ENST00000557765 DNAH3Q8TD57 4116 aa7.37□□□□□ -1.23
GABRB3-213ENST00000557765 TRBV6-8A0A0A6YYG3 113 aa7.37□□□□□ -1.23
GABRB3-213ENST00000557765 IGHV3-73A0A0B4J1V6 119 aa7.37□□□□□ -1.23
GABRB3-213ENST00000557765 LOC389332A0A1B0GUA5 103 aa7.37□□□□□ -1.23
GABRB3-213ENST00000557765 CCL25O15444 150 aa7.37□□□□□ -1.23
GABRB3-213ENST00000557765 MRPL52Q86TS9 123 aaKnown RBP7.37□□□□□ -1.23
GABRB3-213ENST00000557765 C20orf203Q8NBC4 194 aa7.37□□□□□ -1.23
GABRB3-213ENST00000557765 RETNQ9HD89 108 aa7.37□□□□□ -1.23
GABRB3-213ENST00000557765 TMA7Q9Y2S6 64 aaKnown RBP7.37□□□□□ -1.23
GABRB3-213ENST00000557765 KLK5Q9Y337 293 aaPredicted RBP7.37□□□□□ -1.23
GABRB3-213ENST00000557765 NACAE9PAV3 2078 aa7.36□□□□□ -1.23
GABRB3-213ENST00000557765 A0A1B0GUV1 79 aa7.36□□□□□ -1.23
GABRB3-213ENST00000557765 C20orf202A1L168 122 aa7.36□□□□□ -1.23
GABRB3-213ENST00000557765 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.36□□□□□ -1.23
GABRB3-213ENST00000557765 DEFB4AO15263 64 aa7.36□□□□□ -1.23
GABRB3-213ENST00000557765 TSHBP01222 138 aa7.36□□□□□ -1.23
GABRB3-213ENST00000557765 MRPS36P82909 103 aaKnown RBP7.36□□□□□ -1.23
GABRB3-213ENST00000557765 Q6ZSN1 163 aa7.36□□□□□ -1.23
GABRB3-213ENST00000557765 Q6ZTC4 211 aa7.36□□□□□ -1.23
GABRB3-213ENST00000557765 MAP1LC3CQ9BXW4 147 aa7.36□□□□□ -1.23
GABRB3-213ENST00000557765 NBEAL2Q6ZNJ1 2754 aa7.36□□□□□ -1.23
GABRB3-213ENST00000557765 SEC11AP67812 179 aa7.35□□□□□ -1.23
GABRB3-213ENST00000557765 PDZD11Q5EBL8 140 aa7.35□□□□□ -1.23
GABRB3-213ENST00000557765 LELP1Q5T871 98 aa7.35□□□□□ -1.23
GABRB3-213ENST00000557765 PET117Q6UWS5 81 aa7.35□□□□□ -1.23
GABRB3-213ENST00000557765 C2orf66Q6UXQ4 117 aa7.35□□□□□ -1.23
GABRB3-213ENST00000557765 Q6ZN92 141 aa7.35□□□□□ -1.23
GABRB3-213ENST00000557765 URB1-AS1Q96HZ7 61 aa7.35□□□□□ -1.23
GABRB3-213ENST00000557765 VSIG2Q96IQ7 327 aa7.35□□□□□ -1.23
GABRB3-213ENST00000557765 HIST1H2BLQ99880 126 aa7.35□□□□□ -1.23
GABRB3-213ENST00000557765 TMEM243Q9BU79 118 aa7.35□□□□□ -1.23
GABRB3-213ENST00000557765 TRAV12-1A0A0B4J245 112 aa7.34□□□□□ -1.23
GABRB3-213ENST00000557765 TRAV8-6A0A0B4J262 113 aa7.34□□□□□ -1.23
GABRB3-213ENST00000557765 GAGE12JA6NER3 117 aa7.34□□□□□ -1.23
GABRB3-213ENST00000557765 UBE2L6O14933 153 aa7.34□□□□□ -1.23
GABRB3-213ENST00000557765 LINC00310P59036 64 aa7.34□□□□□ -1.23
GABRB3-213ENST00000557765 GAGE1Q13065 139 aa7.34□□□□□ -1.23
GABRB3-213ENST00000557765 GAGE4Q13068 117 aa7.34□□□□□ -1.23
GABRB3-213ENST00000557765 GAGE5Q13069 117 aa7.34□□□□□ -1.23
GABRB3-213ENST00000557765 GAGE13Q4V321 117 aa7.34□□□□□ -1.23
GABRB3-213ENST00000557765 GAS8-AS1O95177 125 aa7.33□□□□□ -1.24
GABRB3-213ENST00000557765 PMCHL1Q16048 86 aa7.33□□□□□ -1.24
GABRB3-213ENST00000557765 PHLDA1Q8WV24 401 aaPredicted RBP7.33□□□□□ -1.24
GABRB3-213ENST00000557765 IFI27L1Q96BM0 104 aa7.33□□□□□ -1.24
GABRB3-213ENST00000557765 TMEM101Q96IK0 257 aa7.33□□□□□ -1.24
GABRB3-213ENST00000557765 CMYA5Q8N3K9 4069 aa7.32□□□□□ -1.24
GABRB3-213ENST00000557765 A0A096LPF7 62 aa7.32□□□□□ -1.24
GABRB3-213ENST00000557765 FABP4P15090 132 aa7.32□□□□□ -1.24
GABRB3-213ENST00000557765 NANOS2P60321 138 aaKnown RBP7.32□□□□□ -1.24
GABRB3-213ENST00000557765 DGAT2L7PQ6IED9 249 aa7.32□□□□□ -1.24
GABRB3-213ENST00000557765 SCGB3A1Q96QR1 104 aa7.32□□□□□ -1.24
GABRB3-213ENST00000557765 A0A096LNJ9 63 aa7.31□□□□□ -1.24
GABRB3-213ENST00000557765 IGIPA6NJ69 53 aa7.31□□□□□ -1.24
GABRB3-213ENST00000557765 P0DMU3 169 aa7.31□□□□□ -1.24
GABRB3-213ENST00000557765 FAM231AP0DMU4 169 aa7.31□□□□□ -1.24
GABRB3-213ENST00000557765 FAM231CP0DMU5 169 aa7.31□□□□□ -1.24
GABRB3-213ENST00000557765 HTN3P15516 51 aa7.31□□□□□ -1.24
GABRB3-213ENST00000557765 CCL18P55774 89 aa7.31□□□□□ -1.24
GABRB3-213ENST00000557765 CEMP1Q6PRD7 247 aaPredicted RBP7.31□□□□□ -1.24
GABRB3-213ENST00000557765 C2orf88Q9BSF0 95 aa7.31□□□□□ -1.24
GABRB3-213ENST00000557765 UPK3BQ9BT76 320 aa7.31□□□□□ -1.24
GABRB3-213ENST00000557765 MEGF8Q7Z7M0 2845 aa7.31□□□□□ -1.24
GABRB3-213ENST00000557765 SMIM6P0DI80 62 aa7.3□□□□□ -1.24
GABRB3-213ENST00000557765 PLNP26678 52 aa7.3□□□□□ -1.24
GABRB3-213ENST00000557765 AMMECR1LQ6DCA0 310 aa7.3□□□□□ -1.24
GABRB3-213ENST00000557765 LGALS9CQ6DKI2 356 aa7.3□□□□□ -1.24
GABRB3-213ENST00000557765 OR5A1Q8NGJ0 315 aa7.3□□□□□ -1.24
GABRB3-213ENST00000557765 UBE2D4Q9Y2X8 147 aa7.3□□□□□ -1.24
GABRB3-213ENST00000557765 SYS1-DBNDD2H3BUS1 97 aa7.29□□□□□ -1.24
GABRB3-213ENST00000557765 NUPR1O60356 82 aa7.29□□□□□ -1.24
GABRB3-213ENST00000557765 JOSD1Q15040 202 aaPredicted RBP7.29□□□□□ -1.24
GABRB3-213ENST00000557765 PMVKQ15126 192 aa7.29□□□□□ -1.24
GABRB3-213ENST00000557765 LYPD5Q6UWN5 251 aa7.29□□□□□ -1.24
GABRB3-213ENST00000557765 TEX43Q6ZNM6 134 aa7.29□□□□□ -1.24
GABRB3-213ENST00000557765 FAM19A2Q8N3H0 131 aa7.29□□□□□ -1.24
GABRB3-213ENST00000557765 C10orf126Q8N4M7 172 aa7.29□□□□□ -1.24
GABRB3-213ENST00000557765 WWC2-AS2Q96NR7 200 aa7.29□□□□□ -1.24
GABRB3-213ENST00000557765 VCX2Q9H322 139 aa7.29□□□□□ -1.24
GABRB3-213ENST00000557765 TRAV9-2A0A087WT02 112 aa7.28□□□□□ -1.24
GABRB3-213ENST00000557765 A0A087WX48 190 aa7.28□□□□□ -1.24
GABRB3-213ENST00000557765 A0A0J9YY99 117 aa7.28□□□□□ -1.24
GABRB3-213ENST00000557765 PRSS1P07477 247 aa7.28□□□□□ -1.24
GABRB3-213ENST00000557765 FGF6P10767 208 aa7.28□□□□□ -1.24
GABRB3-213ENST00000557765 LINC01545Q5VT33 79 aa7.28□□□□□ -1.24
GABRB3-213ENST00000557765 NTM-AS1Q6ZSK4 140 aa7.28□□□□□ -1.24
GABRB3-213ENST00000557765 FAM19A3Q7Z5A8 133 aa7.28□□□□□ -1.24
GABRB3-213ENST00000557765 AMELXQ99217 191 aa7.28□□□□□ -1.24
GABRB3-213ENST00000557765 CHCHD5Q9BSY4 110 aa7.28□□□□□ -1.24
GABRB3-213ENST00000557765 MRPS16Q9Y3D3 137 aaKnown RBP7.28□□□□□ -1.24
GABRB3-213ENST00000557765 F8VRH5 84 aa7.27□□□□□ -1.25
GABRB3-213ENST00000557765 OR10D4PQ8NGN7 298 aa7.27□□□□□ -1.25
GABRB3-213ENST00000557765 DNHD1Q96M86 4753 aa7.26□□□□□ -1.25
GABRB3-213ENST00000557765 TRAV8-4A0A0B4J246 113 aa7.26□□□□□ -1.25
GABRB3-213ENST00000557765 IGHV3-38A0A0C4DH36 116 aa7.26□□□□□ -1.25
GABRB3-213ENST00000557765 LOC100131303A0A0U1RQF7 123 aa7.26□□□□□ -1.25
GABRB3-213ENST00000557765 IFITM10A6NMD0 228 aa7.26□□□□□ -1.25
GABRB3-213ENST00000557765 C3orf84H3BNL1 204 aa7.26□□□□□ -1.25
GABRB3-213ENST00000557765 C3orf79P0CE67 100 aa7.26□□□□□ -1.25
GABRB3-213ENST00000557765 LINC01556Q5JQF7 62 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms