RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 GNG13Q9P2W3 67 aa10.1□□□□□ -0.79
SCFD1-224ENST00000557713 TRAV1-1A0A0B4J248 108 aa10.09□□□□□ -0.79
SCFD1-224ENST00000557713 KANTRA0A1W2PQU2 76 aa10.09□□□□□ -0.79
SCFD1-224ENST00000557713 RAB19A4D1S5 217 aa10.09□□□□□ -0.79
SCFD1-224ENST00000557713 LYZL1Q6UWQ5 148 aa10.09□□□□□ -0.79
SCFD1-224ENST00000557713 SMIM12Q96EX1 92 aa10.09□□□□□ -0.79
SCFD1-224ENST00000557713 DPH3P1Q9H4G8 78 aa10.09□□□□□ -0.79
SCFD1-224ENST00000557713 TRGC1P0CF51 173 aa10.08□□□□□ -0.8
SCFD1-224ENST00000557713 NTF3P20783 257 aa10.08□□□□□ -0.8
SCFD1-224ENST00000557713 EIF5AP63241 154 aaKnown RBP10.08□□□□□ -0.8
SCFD1-224ENST00000557713 C15orf56Q8N910 161 aa10.08□□□□□ -0.8
SCFD1-224ENST00000557713 TNXBP22105 4242 aa10.07□□□□□ -0.8
SCFD1-224ENST00000557713 XKRY2A2RUG3 117 aa10.07□□□□□ -0.8
SCFD1-224ENST00000557713 UBE2L6O14933 153 aa10.07□□□□□ -0.8
SCFD1-224ENST00000557713 AMTP48728 403 aa10.07□□□□□ -0.8
SCFD1-224ENST00000557713 GNG4P50150 75 aa10.07□□□□□ -0.8
SCFD1-224ENST00000557713 WDR73Q6P4I2 378 aa10.07□□□□□ -0.8
SCFD1-224ENST00000557713 C9orf62Q8N4C0 152 aa10.07□□□□□ -0.8
SCFD1-224ENST00000557713 GAGE12HA6NDE8 117 aa10.06□□□□□ -0.8
SCFD1-224ENST00000557713 IFNA1P01562 189 aa10.06□□□□□ -0.8
SCFD1-224ENST00000557713 SULT1A2P50226 295 aa10.06□□□□□ -0.8
SCFD1-224ENST00000557713 COTL1Q14019 142 aa10.06□□□□□ -0.8
SCFD1-224ENST00000557713 TRBV20OR9-2A0A075B6H5 130 aa10.05□□□□□ -0.8
SCFD1-224ENST00000557713 PHOX2AO14813 284 aa10.05□□□□□ -0.8
SCFD1-224ENST00000557713 RPS10P46783 165 aaKnown RBP10.05□□□□□ -0.8
SCFD1-224ENST00000557713 COX6A2Q02221 97 aa10.05□□□□□ -0.8
SCFD1-224ENST00000557713 CFAP161Q6P656 301 aa10.05□□□□□ -0.8
SCFD1-224ENST00000557713 GATD1Q8NB37 220 aa10.04□□□□□ -0.8
SCFD1-224ENST00000557713 NUDT10Q8NFP7 164 aa10.04□□□□□ -0.8
SCFD1-224ENST00000557713 NUDT11Q96G61 164 aa10.04□□□□□ -0.8
SCFD1-224ENST00000557713 PDE6DO43924 150 aa10.03□□□□□ -0.8
SCFD1-224ENST00000557713 NDUFS6O75380 124 aaKnown RBP10.03□□□□□ -0.8
SCFD1-224ENST00000557713 CTRLP40313 264 aa10.03□□□□□ -0.8
SCFD1-224ENST00000557713 MEF2BQ02080 365 aaPredicted RBP10.03□□□□□ -0.8
SCFD1-224ENST00000557713 PRSS3P2Q8NHM4 247 aa10.03□□□□□ -0.8
SCFD1-224ENST00000557713 C7orf33Q8WU49 177 aa10.03□□□□□ -0.8
SCFD1-224ENST00000557713 CNFNQ9BYD5 112 aa10.03□□□□□ -0.8
SCFD1-224ENST00000557713 BIN3Q9NQY0 253 aa10.03□□□□□ -0.8
SCFD1-224ENST00000557713 MED9Q9NWA0 146 aa10.03□□□□□ -0.8
SCFD1-224ENST00000557713 IGKV3OR2-268A0A0C4DH90 116 aa10.02□□□□□ -0.81
SCFD1-224ENST00000557713 TWIST1Q15672 202 aa10.02□□□□□ -0.81
SCFD1-224ENST00000557713 HIGD2BQ4VC39 106 aa10.02□□□□□ -0.81
SCFD1-224ENST00000557713 TRAV26-2A0A0B4J265 109 aa10.01□□□□□ -0.81
SCFD1-224ENST00000557713 TEX46H3BTG2 121 aa10.01□□□□□ -0.81
SCFD1-224ENST00000557713 MAJINQ3KP22 176 aa10.01□□□□□ -0.81
SCFD1-224ENST00000557713 Q6ZNX1 250 aa10.01□□□□□ -0.81
SCFD1-224ENST00000557713 CHCHD10Q8WYQ3 142 aaPredicted RBP10.01□□□□□ -0.81
SCFD1-224ENST00000557713 LINC01600Q96MT4 127 aa10.01□□□□□ -0.81
SCFD1-224ENST00000557713 GVQW2A0A096LPI5 108 aaPredicted RBP10□□□□□ -0.81
SCFD1-224ENST00000557713 H7C423 109 aa10□□□□□ -0.81
SCFD1-224ENST00000557713 NCR2O95944 276 aa10□□□□□ -0.81
SCFD1-224ENST00000557713 GTSF1Q8WW33 167 aa10□□□□□ -0.81
SCFD1-224ENST00000557713 LRP2P98164 4655 aa10□□□□□ -0.81
SCFD1-224ENST00000557713 IGKV2-24A0A0C4DH68 120 aa9.99□□□□□ -0.81
SCFD1-224ENST00000557713 PRR3P79522 188 aaKnown RBP9.99□□□□□ -0.81
SCFD1-224ENST00000557713 AMMECR1LQ6DCA0 310 aa9.99□□□□□ -0.81
SCFD1-224ENST00000557713 EIF5AL1Q6IS14 154 aaKnown RBP9.99□□□□□ -0.81
SCFD1-224ENST00000557713 STPG4Q8N801 248 aa9.99□□□□□ -0.81
SCFD1-224ENST00000557713 RPL39LQ96EH5 51 aaKnown RBP9.99□□□□□ -0.81
SCFD1-224ENST00000557713 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.98□□□□□ -0.81
SCFD1-224ENST00000557713 IGKV2-29A2NJV5 120 aaPredicted RBP9.98□□□□□ -0.81
SCFD1-224ENST00000557713 BCL2P10415 239 aa9.98□□□□□ -0.81
SCFD1-224ENST00000557713 FOXA3P55318 350 aaPredicted RBP9.98□□□□□ -0.81
SCFD1-224ENST00000557713 FOXI1Q12951 378 aa9.98□□□□□ -0.81
SCFD1-224ENST00000557713 RNASEKQ6P5S7 137 aaKnown RBP9.98□□□□□ -0.81
SCFD1-224ENST00000557713 RNASE7Q9H1E1 156 aaKnown RBP9.98□□□□□ -0.81
SCFD1-224ENST00000557713 RPP21Q9H633 154 aaKnown RBP9.98□□□□□ -0.81
SCFD1-224ENST00000557713 A0A096LNI7 61 aa9.97□□□□□ -0.81
SCFD1-224ENST00000557713 K7EN84 100 aa9.97□□□□□ -0.81
SCFD1-224ENST00000557713 FGF6P10767 208 aa9.97□□□□□ -0.81
SCFD1-224ENST00000557713 LYPD6BQ8NI32 183 aa9.97□□□□□ -0.81
SCFD1-224ENST00000557713 OCC1Q8TAD7 63 aa9.97□□□□□ -0.81
SCFD1-224ENST00000557713 FAM231BA6NCW3 169 aa9.96□□□□□ -0.82
SCFD1-224ENST00000557713 SDHAF1A6NFY7 115 aa9.96□□□□□ -0.82
SCFD1-224ENST00000557713 OR5A1Q8NGJ0 315 aa9.96□□□□□ -0.82
SCFD1-224ENST00000557713 RNF213Q63HN8 5207 aa9.95□□□□□ -0.82
SCFD1-224ENST00000557713 APCSP02743 223 aa9.95□□□□□ -0.82
SCFD1-224ENST00000557713 ODF1Q14990 250 aa9.95□□□□□ -0.82
SCFD1-224ENST00000557713 TEX261Q6UWH6 196 aa9.95□□□□□ -0.82
SCFD1-224ENST00000557713 ZNF25P17030 456 aaPredicted RBP9.94□□□□□ -0.82
SCFD1-224ENST00000557713 KRTAP10-8P60410 259 aa9.94□□□□□ -0.82
SCFD1-224ENST00000557713 SMIM15Q7Z3B0 74 aa9.94□□□□□ -0.82
SCFD1-224ENST00000557713 A0A0J9YXV3 536 aa9.93□□□□□ -0.82
SCFD1-224ENST00000557713 TRBV6-5A0A0K0K1A5 114 aa9.93□□□□□ -0.82
SCFD1-224ENST00000557713 LINC00959A0A1B0GUT2 108 aa9.93□□□□□ -0.82
SCFD1-224ENST00000557713 I3L3M4 83 aa9.93□□□□□ -0.82
SCFD1-224ENST00000557713 PMCHP20382 165 aa9.93□□□□□ -0.82
SCFD1-224ENST00000557713 TAGLN2P37802 199 aaKnown RBP9.93□□□□□ -0.82
SCFD1-224ENST00000557713 XCL1P47992 114 aa9.93□□□□□ -0.82
SCFD1-224ENST00000557713 SPINK6Q6UWN8 80 aa9.93□□□□□ -0.82
SCFD1-224ENST00000557713 LINC00474Q9P2X8 69 aa9.93□□□□□ -0.82
SCFD1-224ENST00000557713 IGHV1-58A0A0C4DH39 117 aa9.92□□□□□ -0.82
SCFD1-224ENST00000557713 CCL25O15444 150 aa9.92□□□□□ -0.82
SCFD1-224ENST00000557713 ESDP10768 282 aa9.92□□□□□ -0.82
SCFD1-224ENST00000557713 SRSF9Q13242 221 aaKnown RBP eCLIP9.92□□□□□ -0.82
SCFD1-224ENST00000557713 LINC00526Q96FQ7 95 aa9.92□□□□□ -0.82
SCFD1-224ENST00000557713 GAS8-AS1O95177 125 aa9.91□□□□□ -0.82
SCFD1-224ENST00000557713 TMEM101Q96IK0 257 aa9.91□□□□□ -0.82
SCFD1-224ENST00000557713 BTF3L4Q96K17 158 aa9.91□□□□□ -0.82
SCFD1-224ENST00000557713 GATCO43716 136 aaKnown RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms