RNA–Protein interactions for RNA: ENST00000557559.1

PRKCH-225, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-225ENST00000557559 SH2D1AO60880 128 aa4.55□□□□□ -1.68
PRKCH-225ENST00000557559 CXorf1O96002 111 aa4.55□□□□□ -1.68
PRKCH-225ENST00000557559 MBP02144 154 aa4.55□□□□□ -1.68
PRKCH-225ENST00000557559 SLPIP03973 132 aa4.55□□□□□ -1.68
PRKCH-225ENST00000557559 RPL35P42766 123 aaKnown RBP4.55□□□□□ -1.68
PRKCH-225ENST00000557559 C12orf57Q99622 126 aa4.55□□□□□ -1.68
PRKCH-225ENST00000557559 SMIM3Q9BZL3 60 aa4.55□□□□□ -1.68
PRKCH-225ENST00000557559 PSORS1C2Q9UIG4 136 aa4.55□□□□□ -1.68
PRKCH-225ENST00000557559 ZFP30Q9Y2G7 519 aa4.55□□□□□ -1.68
PRKCH-225ENST00000557559 TRAV34A0A0B4J273 112 aa4.54□□□□□ -1.68
PRKCH-225ENST00000557559 F5H697 171 aa4.54□□□□□ -1.68
PRKCH-225ENST00000557559 H0YIZ8 118 aa4.54□□□□□ -1.68
PRKCH-225ENST00000557559 S100A9P06702 114 aaKnown RBP4.54□□□□□ -1.68
PRKCH-225ENST00000557559 SMIM17P0DL12 118 aa4.54□□□□□ -1.68
PRKCH-225ENST00000557559 MALP21145 153 aa4.54□□□□□ -1.68
PRKCH-225ENST00000557559 RPL12P30050 165 aaKnown RBP4.54□□□□□ -1.68
PRKCH-225ENST00000557559 SULT1A2P50226 295 aa4.54□□□□□ -1.68
PRKCH-225ENST00000557559 AKR1D1P51857 326 aa4.54□□□□□ -1.68
PRKCH-225ENST00000557559 UBE2G1P62253 170 aa4.54□□□□□ -1.68
PRKCH-225ENST00000557559 CACNG7P62955 275 aa4.54□□□□□ -1.68
PRKCH-225ENST00000557559 SRSF9Q13242 221 aaKnown RBP eCLIP4.54□□□□□ -1.68
PRKCH-225ENST00000557559 COTL1Q14019 142 aa4.54□□□□□ -1.68
PRKCH-225ENST00000557559 NTM-AS1Q6ZSK4 140 aa4.54□□□□□ -1.68
PRKCH-225ENST00000557559 COX8CQ7Z4L0 72 aa4.54□□□□□ -1.68
PRKCH-225ENST00000557559 C15orf56Q8N910 161 aa4.54□□□□□ -1.68
PRKCH-225ENST00000557559 PRSS3P2Q8NHM4 247 aa4.54□□□□□ -1.68
PRKCH-225ENST00000557559 PPP1R1CQ8WVI7 109 aa4.54□□□□□ -1.68
PRKCH-225ENST00000557559 HIST1H2BAQ96A08 127 aa4.54□□□□□ -1.68
PRKCH-225ENST00000557559 ZNF471Q9BX82 626 aaPredicted RBP4.54□□□□□ -1.68
PRKCH-225ENST00000557559 NKX6-2Q9C056 277 aaPredicted RBP4.54□□□□□ -1.68
PRKCH-225ENST00000557559 BIN3Q9NQY0 253 aa4.54□□□□□ -1.68
PRKCH-225ENST00000557559 LPAP08519 4548 aa4.54□□□□□ -1.68
PRKCH-225ENST00000557559 MUC2Q02817 5179 aa4.54□□□□□ -1.68
PRKCH-225ENST00000557559 TMSB15BA0A087X1C1 80 aa4.53□□□□□ -1.68
PRKCH-225ENST00000557559 A0A096LNI7 61 aa4.53□□□□□ -1.68
PRKCH-225ENST00000557559 FAM74A7A6NL05 159 aa4.53□□□□□ -1.68
PRKCH-225ENST00000557559 G3V3Q6 166 aa4.53□□□□□ -1.68
PRKCH-225ENST00000557559 PEX7O00628 323 aa4.53□□□□□ -1.68
PRKCH-225ENST00000557559 UBE2L6O14933 153 aa4.53□□□□□ -1.68
PRKCH-225ENST00000557559 SSNA1O43805 119 aa4.53□□□□□ -1.68
PRKCH-225ENST00000557559 TNFRSF6BO95407 300 aa4.53□□□□□ -1.68
PRKCH-225ENST00000557559 SIX6O95475 246 aa4.53□□□□□ -1.68
PRKCH-225ENST00000557559 CXCL1P09341 107 aa4.53□□□□□ -1.68
PRKCH-225ENST00000557559 FAM74A3Q4VXF1 159 aa4.53□□□□□ -1.68
PRKCH-225ENST00000557559 C20orf203Q8NBC4 194 aa4.53□□□□□ -1.68
PRKCH-225ENST00000557559 FMC1Q96HJ9 113 aa4.53□□□□□ -1.68
PRKCH-225ENST00000557559 AP1S3Q96PC3 154 aa4.53□□□□□ -1.68
PRKCH-225ENST00000557559 AQP10Q96PS8 301 aa4.53□□□□□ -1.68
PRKCH-225ENST00000557559 PSMG3Q9BT73 122 aaPredicted RBP4.53□□□□□ -1.68
PRKCH-225ENST00000557559 TMEM243Q9BU79 118 aa4.53□□□□□ -1.68
PRKCH-225ENST00000557559 GVQW2A0A096LPI5 108 aaPredicted RBP4.52□□□□□ -1.69
PRKCH-225ENST00000557559 MUC21A0A0G2JKD1 596 aa4.52□□□□□ -1.69
PRKCH-225ENST00000557559 LINC00587B1AMM8 73 aa4.52□□□□□ -1.69
PRKCH-225ENST00000557559 GIPP09681 153 aaPredicted RBP4.52□□□□□ -1.69
PRKCH-225ENST00000557559 RAB5CP51148 216 aa4.52□□□□□ -1.69
PRKCH-225ENST00000557559 SERF2P84101 59 aa4.52□□□□□ -1.69
PRKCH-225ENST00000557559 ZNF674Q2M3X9 581 aa4.52□□□□□ -1.69
PRKCH-225ENST00000557559 SPANXN1Q5VSR9 72 aa4.52□□□□□ -1.69
PRKCH-225ENST00000557559 TMUB2Q71RG4 321 aa4.52□□□□□ -1.69
PRKCH-225ENST00000557559 OR10AG1Q8NH19 301 aa4.52□□□□□ -1.69
PRKCH-225ENST00000557559 ACTR3CQ9C0K3 210 aaPredicted RBP4.52□□□□□ -1.69
PRKCH-225ENST00000557559 GAGE12HA6NDE8 117 aa4.51□□□□□ -1.69
PRKCH-225ENST00000557559 HMSDA8MTL9 139 aa4.51□□□□□ -1.69
PRKCH-225ENST00000557559 APOC3P02656 99 aa4.51□□□□□ -1.69
PRKCH-225ENST00000557559 CRIP1P50238 77 aa4.51□□□□□ -1.69
PRKCH-225ENST00000557559 H2BFSP57053 126 aa4.51□□□□□ -1.69
PRKCH-225ENST00000557559 HIGD2BQ4VC39 106 aa4.51□□□□□ -1.69
PRKCH-225ENST00000557559 PGLYRP4Q96LB8 373 aa4.51□□□□□ -1.69
PRKCH-225ENST00000557559 CHTOPQ9Y3Y2 248 aaKnown RBP4.51□□□□□ -1.69
PRKCH-225ENST00000557559 IGLV4-60A0A075B6I1 120 aa4.5□□□□□ -1.69
PRKCH-225ENST00000557559 SNAI2O43623 268 aa4.5□□□□□ -1.69
PRKCH-225ENST00000557559 LTAP01374 205 aa4.5□□□□□ -1.69
PRKCH-225ENST00000557559 OR5AL1P0C617 328 aa4.5□□□□□ -1.69
PRKCH-225ENST00000557559 ALKAL2Q6UX46 152 aa4.5□□□□□ -1.69
PRKCH-225ENST00000557559 FER1L6-AS1Q8NA97 138 aa4.5□□□□□ -1.69
PRKCH-225ENST00000557559 CARD19Q96LW7 228 aa4.5□□□□□ -1.69
PRKCH-225ENST00000557559 WFDC1Q9HC57 220 aa4.5□□□□□ -1.69
PRKCH-225ENST00000557559 TNFSF18Q9UNG2 199 aa4.5□□□□□ -1.69
PRKCH-225ENST00000557559 FAT4Q6V0I7 4981 aa4.49□□□□□ -1.69
PRKCH-225ENST00000557559 TEX46H3BTG2 121 aa4.49□□□□□ -1.69
PRKCH-225ENST00000557559 MT-ND6P03923 174 aa4.49□□□□□ -1.69
PRKCH-225ENST00000557559 ATP6V0CP27449 155 aa4.49□□□□□ -1.69
PRKCH-225ENST00000557559 UBE2G2P60604 165 aa4.49□□□□□ -1.69
PRKCH-225ENST00000557559 PRR4Q16378 134 aa4.49□□□□□ -1.69
PRKCH-225ENST00000557559 UQCC3Q6UW78 93 aa4.49□□□□□ -1.69
PRKCH-225ENST00000557559 SFT2D1Q8WV19 159 aa4.49□□□□□ -1.69
PRKCH-225ENST00000557559 DIRC1Q969H9 104 aa4.49□□□□□ -1.69
PRKCH-225ENST00000557559 GFRA4Q9GZZ7 299 aa4.49□□□□□ -1.69
PRKCH-225ENST00000557559 IGLV1-50A0A075B6I6 118 aa4.48□□□□□ -1.69
PRKCH-225ENST00000557559 CTXND1A0A1B0GTU2 59 aa4.48□□□□□ -1.69
PRKCH-225ENST00000557559 M0QY20 66 aa4.48□□□□□ -1.69
PRKCH-225ENST00000557559 MGPP08493 103 aa4.48□□□□□ -1.69
PRKCH-225ENST00000557559 AKR1C3P42330 323 aa4.48□□□□□ -1.69
PRKCH-225ENST00000557559 AMTP48728 403 aa4.48□□□□□ -1.69
PRKCH-225ENST00000557559 CHCHD10Q8WYQ3 142 aaPredicted RBP4.48□□□□□ -1.69
PRKCH-225ENST00000557559 FXYD6-FXYD2A0A087WZ82 144 aa4.47□□□□□ -1.69
PRKCH-225ENST00000557559 IGHV1-58A0A0C4DH39 117 aa4.47□□□□□ -1.69
PRKCH-225ENST00000557559 IGKV3OR2-268A0A0C4DH90 116 aa4.47□□□□□ -1.69
PRKCH-225ENST00000557559 LOC107984640A0A0U1RRK4 108 aa4.47□□□□□ -1.69
PRKCH-225ENST00000557559 RAB19A4D1S5 217 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms