RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 FAM240AA0A1B0GVK7 77 aa2.69□□□□□ -1.98
PRPF39-212ENST00000557477 A8MWV9 139 aa2.69□□□□□ -1.98
PRPF39-212ENST00000557477 LYNX1G3V0Z9 82 aa2.69□□□□□ -1.98
PRPF39-212ENST00000557477 PIN1P1O15428 100 aa2.69□□□□□ -1.98
PRPF39-212ENST00000557477 CPSF4O95639 269 aaKnown RBP2.69□□□□□ -1.98
PRPF39-212ENST00000557477 HLA-DQA1P01909 254 aa2.69□□□□□ -1.98
PRPF39-212ENST00000557477 CD7P09564 240 aa2.69□□□□□ -1.98
PRPF39-212ENST00000557477 OR5AL1P0C617 328 aa2.69□□□□□ -1.98
PRPF39-212ENST00000557477 LYNX1P0DP58 116 aa2.69□□□□□ -1.98
PRPF39-212ENST00000557477 HLA-DRB4P13762 266 aa2.69□□□□□ -1.98
PRPF39-212ENST00000557477 HLA-DMBP28068 263 aa2.69□□□□□ -1.98
PRPF39-212ENST00000557477 ZNF117Q03924 483 aa2.69□□□□□ -1.98
PRPF39-212ENST00000557477 CDK5R1Q15078 307 aa2.69□□□□□ -1.98
PRPF39-212ENST00000557477 C12orf74Q32Q52 190 aa2.69□□□□□ -1.98
PRPF39-212ENST00000557477 AMN1Q8IY45 258 aa2.69□□□□□ -1.98
PRPF39-212ENST00000557477 ZCCHC24Q8N2G6 241 aaKnown RBP2.69□□□□□ -1.98
PRPF39-212ENST00000557477 C15orf53Q8NAA6 179 aa2.69□□□□□ -1.98
PRPF39-212ENST00000557477 OR10AC1Q8NH08 325 aa2.69□□□□□ -1.98
PRPF39-212ENST00000557477 MYOZ3Q8TDC0 251 aa2.69□□□□□ -1.98
PRPF39-212ENST00000557477 COPS9Q8WXC6 57 aa2.69□□□□□ -1.98
PRPF39-212ENST00000557477 C18orf15Q96N68 181 aa2.69□□□□□ -1.98
PRPF39-212ENST00000557477 SHANK2-AS3Q9BTD1 123 aa2.69□□□□□ -1.98
PRPF39-212ENST00000557477 IL36BQ9NZH7 164 aa2.69□□□□□ -1.98
PRPF39-212ENST00000557477 HIGD1BQ9P298 99 aa2.69□□□□□ -1.98
PRPF39-212ENST00000557477 RPUSD1Q9UJJ7 312 aaKnown RBP2.69□□□□□ -1.98
PRPF39-212ENST00000557477 KLK5Q9Y337 293 aaPredicted RBP2.69□□□□□ -1.98
PRPF39-212ENST00000557477 HLA-DRB4X5D2U9 266 aa2.69□□□□□ -1.98
PRPF39-212ENST00000557477 ANK2Q01484 3957 aa2.69□□□□□ -1.98
PRPF39-212ENST00000557477 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.69□□□□□ -1.981e-7■■■■■ 32.1
PRPF39-212ENST00000557477 EXPH5Q8NEV8 1989 aa2.69□□□□□ -1.98
PRPF39-212ENST00000557477 HEATR5AQ86XA9 2040 aa2.68□□□□□ -1.98
PRPF39-212ENST00000557477 MED12LQ86YW9 2145 aa2.68□□□□□ -1.98
PRPF39-212ENST00000557477 TRAV12-2A0A075B6T6 113 aa2.68□□□□□ -1.98
PRPF39-212ENST00000557477 TRAV2A0A0B4J234 112 aa2.68□□□□□ -1.98
PRPF39-212ENST00000557477 TRAV8-2A0A0B4J237 113 aa2.68□□□□□ -1.98
PRPF39-212ENST00000557477 TRAV8-4A0A0B4J246 113 aa2.68□□□□□ -1.98
PRPF39-212ENST00000557477 J3QRE1 110 aa2.68□□□□□ -1.98
PRPF39-212ENST00000557477 RTL8CO15255 209 aa2.68□□□□□ -1.98
PRPF39-212ENST00000557477 SSSCA1O60232 199 aa2.68□□□□□ -1.98
PRPF39-212ENST00000557477 IGKCP01834 107 aa2.68□□□□□ -1.98
PRPF39-212ENST00000557477 IFI6P09912 130 aa2.68□□□□□ -1.98
PRPF39-212ENST00000557477 MYCNOSP40205 109 aa2.68□□□□□ -1.98
PRPF39-212ENST00000557477 UBE2E1P51965 193 aa2.68□□□□□ -1.98
PRPF39-212ENST00000557477 RPL38P63173 70 aaKnown RBP2.68□□□□□ -1.98
PRPF39-212ENST00000557477 SP6Q3SY56 376 aa2.68□□□□□ -1.98
PRPF39-212ENST00000557477 Q6ZQT7 251 aa2.68□□□□□ -1.98
PRPF39-212ENST00000557477 Q6ZS49 121 aa2.68□□□□□ -1.98
PRPF39-212ENST00000557477 TRAPPC6BQ86SZ2 158 aa2.68□□□□□ -1.98
PRPF39-212ENST00000557477 SBSPONQ8IVN8 264 aa2.68□□□□□ -1.98
PRPF39-212ENST00000557477 LINC00311Q8N616 119 aa2.68□□□□□ -1.98
PRPF39-212ENST00000557477 BRK1Q8WUW1 75 aa2.68□□□□□ -1.98
PRPF39-212ENST00000557477 H1FXQ92522 213 aaKnown RBP2.68□□□□□ -1.98
PRPF39-212ENST00000557477 FMC1Q96HJ9 113 aa2.68□□□□□ -1.98
PRPF39-212ENST00000557477 FAM19A4Q96LR4 140 aa2.68□□□□□ -1.98
PRPF39-212ENST00000557477 UBE2E2Q96LR5 201 aa2.68□□□□□ -1.98
PRPF39-212ENST00000557477 IGF2BP2-AS1Q96M15 143 aa2.68□□□□□ -1.98
PRPF39-212ENST00000557477 TMEM243Q9BU79 118 aa2.68□□□□□ -1.98
PRPF39-212ENST00000557477 CKLFQ9UBR5 152 aa2.68□□□□□ -1.98
PRPF39-212ENST00000557477 TP73-AS1Q9UF72 201 aa2.68□□□□□ -1.98
PRPF39-212ENST00000557477 PCTPQ9UKL6 214 aa2.68□□□□□ -1.98
PRPF39-212ENST00000557477 SERP1Q9Y6X1 66 aa2.68□□□□□ -1.98
PRPF39-212ENST00000557477 MED12Q93074 2177 aa2.68□□□□□ -1.98
PRPF39-212ENST00000557477 FREM3P0C091 2139 aa2.68□□□□□ -1.98
PRPF39-212ENST00000557477 IGLV3-32A0A0A0MS00 114 aa2.67□□□□□ -1.98
PRPF39-212ENST00000557477 TRAV8-1A0A0A6YYK1 113 aa2.67□□□□□ -1.98
PRPF39-212ENST00000557477 IGHV1-18A0A0C4DH31 117 aa2.67□□□□□ -1.98
PRPF39-212ENST00000557477 IGHV1-24A0A0C4DH33 117 aa2.67□□□□□ -1.98
PRPF39-212ENST00000557477 KNCNA6PVL3 124 aa2.67□□□□□ -1.98
PRPF39-212ENST00000557477 J3QLW9 94 aa2.67□□□□□ -1.98
PRPF39-212ENST00000557477 ATOX1O00244 68 aa2.67□□□□□ -1.98
PRPF39-212ENST00000557477 PDCD6O75340 191 aa2.67□□□□□ -1.98
PRPF39-212ENST00000557477 NDUFB2O95178 105 aa2.67□□□□□ -1.98
PRPF39-212ENST00000557477 IGKV1D-16P01601 117 aa2.67□□□□□ -1.98
PRPF39-212ENST00000557477 IGHG2P01859 326 aa2.67□□□□□ -1.98
PRPF39-212ENST00000557477 SCGB1C2P0DMR2 95 aa2.67□□□□□ -1.98
PRPF39-212ENST00000557477 FXYD6P3P58550 94 aa2.67□□□□□ -1.98
PRPF39-212ENST00000557477 NPC2P61916 151 aa2.67□□□□□ -1.98
PRPF39-212ENST00000557477 RPL18AQ02543 176 aaKnown RBP2.67□□□□□ -1.98
PRPF39-212ENST00000557477 RTL8BQ17RB0 113 aa2.67□□□□□ -1.98
PRPF39-212ENST00000557477 RNASE13Q5GAN3 156 aaKnown RBP2.67□□□□□ -1.98
PRPF39-212ENST00000557477 LINC01545Q5VT33 79 aa2.67□□□□□ -1.98
PRPF39-212ENST00000557477 Q6ZRU5 148 aa2.67□□□□□ -1.98
PRPF39-212ENST00000557477 C6orf201Q7Z4U5 140 aa2.67□□□□□ -1.98
PRPF39-212ENST00000557477 PRR15Q8IV56 129 aa2.67□□□□□ -1.98
PRPF39-212ENST00000557477 OR5AS1Q8N127 324 aa2.67□□□□□ -1.98
PRPF39-212ENST00000557477 FAM19A2Q8N3H0 131 aa2.67□□□□□ -1.98
PRPF39-212ENST00000557477 DRAM1Q8N682 238 aa2.67□□□□□ -1.98
PRPF39-212ENST00000557477 CHCHD1Q96BP2 118 aaKnown RBP2.67□□□□□ -1.98
PRPF39-212ENST00000557477 ABHD14BQ96IU4 210 aa2.67□□□□□ -1.98
PRPF39-212ENST00000557477 DSCR8Q96T75 97 aa2.67□□□□□ -1.98
PRPF39-212ENST00000557477 RNF5Q99942 180 aa2.67□□□□□ -1.98
PRPF39-212ENST00000557477 RTL8AQ9BWD3 113 aa2.67□□□□□ -1.98
PRPF39-212ENST00000557477 C8orf17Q9NRJ1 99 aa2.67□□□□□ -1.98
PRPF39-212ENST00000557477 TET2Q6N021 2002 aaPredicted RBP2.67□□□□□ -1.98
PRPF39-212ENST00000557477 ROS1P08922 2347 aa2.67□□□□□ -1.98
PRPF39-212ENST00000557477 TRBV19A0A075B6N1 114 aa2.66□□□□□ -1.98
PRPF39-212ENST00000557477 IGKV1-27A0A075B6S5 117 aa2.66□□□□□ -1.98
PRPF39-212ENST00000557477 A0A1W2PQD3 144 aa2.66□□□□□ -1.98
PRPF39-212ENST00000557477 IZUMO1RA6ND01 250 aa2.66□□□□□ -1.98
PRPF39-212ENST00000557477 LEPROTL1O95214 131 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms