RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 IQCJQ1A5X6 159 aa8.91□□□□□ -0.98
SLIRP-210ENST00000557431 SUMO4Q6EEV6 95 aa8.91□□□□□ -0.98
SLIRP-210ENST00000557431 SPACA4Q8TDM5 124 aa8.91□□□□□ -0.98
SLIRP-210ENST00000557431 TPPP3Q9BW30 176 aa8.91□□□□□ -0.98
SLIRP-210ENST00000557431 IGHV3-64A0A075B6Q5 118 aa8.9□□□□□ -0.98
SLIRP-210ENST00000557431 C19orf71A6NCJ1 209 aa8.9□□□□□ -0.98
SLIRP-210ENST00000557431 TMEM97Q5BJF2 176 aa8.9□□□□□ -0.98
SLIRP-210ENST00000557431 CLRN3Q8NCR9 226 aa8.9□□□□□ -0.98
SLIRP-210ENST00000557431 AP1S3Q96PC3 154 aa8.9□□□□□ -0.98
SLIRP-210ENST00000557431 IGKV3OR2-268A0A0C4DH90 116 aa8.89□□□□□ -0.99
SLIRP-210ENST00000557431 M0QY20 66 aa8.89□□□□□ -0.99
SLIRP-210ENST00000557431 BIN3Q9NQY0 253 aa8.89□□□□□ -0.99
SLIRP-210ENST00000557431 AP5S1Q9NUS5 200 aa8.89□□□□□ -0.99
SLIRP-210ENST00000557431 IGKV2-24A0A0C4DH68 120 aa8.88□□□□□ -0.99
SLIRP-210ENST00000557431 TMEM250H0YL14 139 aa8.88□□□□□ -0.99
SLIRP-210ENST00000557431 RPS20P60866 119 aaKnown RBP8.88□□□□□ -0.99
SLIRP-210ENST00000557431 HIGD2BQ4VC39 106 aa8.88□□□□□ -0.99
SLIRP-210ENST00000557431 C15orf56Q8N910 161 aa8.88□□□□□ -0.99
SLIRP-210ENST00000557431 OR2D3Q8NGH3 330 aa8.88□□□□□ -0.99
SLIRP-210ENST00000557431 TMEM243Q9BU79 118 aa8.88□□□□□ -0.99
SLIRP-210ENST00000557431 P01737 135 aa8.87□□□□□ -0.99
SLIRP-210ENST00000557431 IGLC6P0CF74 106 aa8.87□□□□□ -0.99
SLIRP-210ENST00000557431 COX6A2Q02221 97 aa8.87□□□□□ -0.99
SLIRP-210ENST00000557431 PRSS3P2Q8NHM4 247 aa8.87□□□□□ -0.99
SLIRP-210ENST00000557431 OCC1Q8TAD7 63 aa8.87□□□□□ -0.99
SLIRP-210ENST00000557431 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.86□□□□□ -0.99
SLIRP-210ENST00000557431 GAGE12HA6NDE8 117 aa8.86□□□□□ -0.99
SLIRP-210ENST00000557431 MAJINQ3KP22 176 aa8.86□□□□□ -0.99
SLIRP-210ENST00000557431 NUDT10Q8NFP7 164 aa8.86□□□□□ -0.99
SLIRP-210ENST00000557431 GTSF1Q8WW33 167 aa8.86□□□□□ -0.99
SLIRP-210ENST00000557431 NUDT11Q96G61 164 aa8.86□□□□□ -0.99
SLIRP-210ENST00000557431 FAM210AQ96ND0 272 aa8.86□□□□□ -0.99
SLIRP-210ENST00000557431 EIF5A2Q9GZV4 153 aaKnown RBP8.86□□□□□ -0.99
SLIRP-210ENST00000557431 DPH3P1Q9H4G8 78 aa8.86□□□□□ -0.99
SLIRP-210ENST00000557431 PLAC8Q9NZF1 115 aa8.86□□□□□ -0.99
SLIRP-210ENST00000557431 TRAV8-4A0A0B4J246 113 aa8.85□□□□□ -0.99
SLIRP-210ENST00000557431 XKRY2A2RUG3 117 aa8.85□□□□□ -0.99
SLIRP-210ENST00000557431 K7EN84 100 aa8.85□□□□□ -0.99
SLIRP-210ENST00000557431 NDUFS6O75380 124 aaKnown RBP8.85□□□□□ -0.99
SLIRP-210ENST00000557431 TEX261Q6UWH6 196 aa8.85□□□□□ -0.99
SLIRP-210ENST00000557431 FER1L6-AS1Q8NA97 138 aa8.85□□□□□ -0.99
SLIRP-210ENST00000557431 RASL11AQ6T310 242 aa8.84□□□□□ -0.99
SLIRP-210ENST00000557431 RNF185Q96GF1 192 aa8.84□□□□□ -0.99
SLIRP-210ENST00000557431 A0A1B0GUV1 79 aa8.83□□□□□ -1
SLIRP-210ENST00000557431 F2Z2F3 143 aa8.83□□□□□ -1
SLIRP-210ENST00000557431 H7C1H1 209 aa8.83□□□□□ -1
SLIRP-210ENST00000557431 UBE2L6O14933 153 aa8.83□□□□□ -1
SLIRP-210ENST00000557431 AMTP48728 403 aa8.83□□□□□ -1
SLIRP-210ENST00000557431 PRR3P79522 188 aaKnown RBP8.83□□□□□ -1
SLIRP-210ENST00000557431 C7orf33Q8WU49 177 aa8.83□□□□□ -1
SLIRP-210ENST00000557431 RNASE7Q9H1E1 156 aaKnown RBP8.83□□□□□ -1
SLIRP-210ENST00000557431 A0A096LNI7 61 aa8.82□□□□□ -1
SLIRP-210ENST00000557431 SRP19P09132 144 aaKnown RBP8.82□□□□□ -1
SLIRP-210ENST00000557431 CEBPGP53567 150 aa8.82□□□□□ -1
SLIRP-210ENST00000557431 CACNG7P62955 275 aa8.82□□□□□ -1
SLIRP-210ENST00000557431 WDR73Q6P4I2 378 aa8.82□□□□□ -1
SLIRP-210ENST00000557431 LYZL1Q6UWQ5 148 aa8.82□□□□□ -1
SLIRP-210ENST00000557431 STPG4Q8N801 248 aa8.82□□□□□ -1
SLIRP-210ENST00000557431 LINC00526Q96FQ7 95 aa8.82□□□□□ -1
SLIRP-210ENST00000557431 RPP21Q9H633 154 aaKnown RBP8.82□□□□□ -1
SLIRP-210ENST00000557431 TRAV26-2A0A0B4J265 109 aa8.81□□□□□ -1
SLIRP-210ENST00000557431 RPS10P46783 165 aaKnown RBP8.81□□□□□ -1
SLIRP-210ENST00000557431 FAM231DQ6ZW35 169 aa8.81□□□□□ -1
SLIRP-210ENST00000557431 LINC01600Q96MT4 127 aa8.81□□□□□ -1
SLIRP-210ENST00000557431 SMIM7Q9BQ49 75 aa8.81□□□□□ -1
SLIRP-210ENST00000557431 NIT2Q9NQR4 276 aa8.81□□□□□ -1
SLIRP-210ENST00000557431 RNF213Q63HN8 5207 aa8.8□□□□□ -1
SLIRP-210ENST00000557431 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.8□□□□□ -1
SLIRP-210ENST00000557431 IGKV2-29A2NJV5 120 aaPredicted RBP8.8□□□□□ -1
SLIRP-210ENST00000557431 COTL1Q14019 142 aa8.8□□□□□ -1
SLIRP-210ENST00000557431 CHCHD10Q8WYQ3 142 aaPredicted RBP8.8□□□□□ -1
SLIRP-210ENST00000557431 PGLYRP4Q96LB8 373 aa8.8□□□□□ -1
SLIRP-210ENST00000557431 ZNF727A8MUV8 499 aa8.79□□□□□ -1
SLIRP-210ENST00000557431 GATCO43716 136 aaKnown RBP8.79□□□□□ -1
SLIRP-210ENST00000557431 NTF3P20783 257 aa8.79□□□□□ -1
SLIRP-210ENST00000557431 CTRLP40313 264 aa8.79□□□□□ -1
SLIRP-210ENST00000557431 RPL39LQ96EH5 51 aaKnown RBP8.79□□□□□ -1
SLIRP-210ENST00000557431 TRGC1P0CF51 173 aa8.78□□□□□ -1
SLIRP-210ENST00000557431 RNASEKQ6P5S7 137 aaKnown RBP8.78□□□□□ -1
SLIRP-210ENST00000557431 LINC01551Q86U37 167 aa8.78□□□□□ -1
SLIRP-210ENST00000557431 GATD1Q8NB37 220 aa8.78□□□□□ -1
SLIRP-210ENST00000557431 CNFNQ9BYD5 112 aa8.78□□□□□ -1
SLIRP-210ENST00000557431 A0A0J9YXV3 536 aa8.77□□□□□ -1.01
SLIRP-210ENST00000557431 A8MWL6 223 aa8.77□□□□□ -1.01
SLIRP-210ENST00000557431 LPAP08519 4548 aa8.76□□□□□ -1.01
SLIRP-210ENST00000557431 C9JQL5 133 aa8.76□□□□□ -1.01
SLIRP-210ENST00000557431 FOXA3P55318 350 aaPredicted RBP8.76□□□□□ -1.01
SLIRP-210ENST00000557431 SRSF3P84103 164 aaKnown RBP8.76□□□□□ -1.01
SLIRP-210ENST00000557431 PEA15Q15121 130 aa8.76□□□□□ -1.01
SLIRP-210ENST00000557431 FAM74A3Q4VXF1 159 aa8.76□□□□□ -1.01
SLIRP-210ENST00000557431 CT83Q5H943 113 aa8.76□□□□□ -1.01
SLIRP-210ENST00000557431 AMMECR1LQ6DCA0 310 aa8.76□□□□□ -1.01
SLIRP-210ENST00000557431 CFAP161Q6P656 301 aa8.76□□□□□ -1.01
SLIRP-210ENST00000557431 SMDT1Q9H4I9 107 aa8.76□□□□□ -1.01
SLIRP-210ENST00000557431 GVQW2A0A096LPI5 108 aaPredicted RBP8.75□□□□□ -1.01
SLIRP-210ENST00000557431 KRTAP10-8P60410 259 aa8.75□□□□□ -1.01
SLIRP-210ENST00000557431 FOXI1Q12951 378 aa8.75□□□□□ -1.01
SLIRP-210ENST00000557431 TWIST1Q15672 202 aa8.75□□□□□ -1.01
SLIRP-210ENST00000557431 TMEM241Q24JQ0 296 aa8.75□□□□□ -1.01
SLIRP-210ENST00000557431 OSTCQ9NRP0 149 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 166.2 ms