RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 NUDT11Q96G61 164 aa10.2□□□□□ -0.78
TUBB3-213ENST00000557262 CNBPP62633 177 aaKnown RBP10.19□□□□□ -0.78
TUBB3-213ENST00000557262 hDV102S1A0JD36 115 aa10.18□□□□□ -0.78
TUBB3-213ENST00000557262 PANO1I0J062 215 aa10.18□□□□□ -0.78
TUBB3-213ENST00000557262 UBE2L6O14933 153 aa10.18□□□□□ -0.78
TUBB3-213ENST00000557262 BCL2P10415 239 aa10.18□□□□□ -0.78
TUBB3-213ENST00000557262 COTL1Q14019 142 aa10.18□□□□□ -0.78
TUBB3-213ENST00000557262 GFRA4Q9GZZ7 299 aa10.18□□□□□ -0.78
TUBB3-213ENST00000557262 AP5S1Q9NUS5 200 aa10.18□□□□□ -0.78
TUBB3-213ENST00000557262 HMCN2Q8NDA2 5059 aa10.18□□□□□ -0.78
TUBB3-213ENST00000557262 TWIST1Q15672 202 aa10.17□□□□□ -0.78
TUBB3-213ENST00000557262 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.16□□□□□ -0.78
TUBB3-213ENST00000557262 TAGLN2P37802 199 aaKnown RBP10.16□□□□□ -0.78
TUBB3-213ENST00000557262 CTRLP40313 264 aa10.16□□□□□ -0.78
TUBB3-213ENST00000557262 AMTP48728 403 aa10.16□□□□□ -0.78
TUBB3-213ENST00000557262 HNRNPA3P51991 378 aaKnown RBP10.16□□□□□ -0.78
TUBB3-213ENST00000557262 CIRBPQ14011 172 aaKnown RBP10.16□□□□□ -0.78
TUBB3-213ENST00000557262 DPH3Q96FX2 82 aa10.16□□□□□ -0.78
TUBB3-213ENST00000557262 CNFNQ9BYD5 112 aa10.16□□□□□ -0.78
TUBB3-213ENST00000557262 IGHV3-64A0A075B6Q5 118 aa10.15□□□□□ -0.78
TUBB3-213ENST00000557262 SLPIP03973 132 aa10.15□□□□□ -0.78
TUBB3-213ENST00000557262 SLC51BQ86UW2 128 aa10.15□□□□□ -0.78
TUBB3-213ENST00000557262 GATD1Q8NB37 220 aa10.15□□□□□ -0.78
TUBB3-213ENST00000557262 OCC1Q8TAD7 63 aa10.15□□□□□ -0.78
TUBB3-213ENST00000557262 RPP21Q9H633 154 aaKnown RBP10.15□□□□□ -0.78
TUBB3-213ENST00000557262 TCTE3Q8IZS6 198 aa10.14□□□□□ -0.79
TUBB3-213ENST00000557262 RNASE7Q9H1E1 156 aaKnown RBP10.14□□□□□ -0.79
TUBB3-213ENST00000557262 CFAP161Q6P656 301 aa10.13□□□□□ -0.79
TUBB3-213ENST00000557262 RNF185Q96GF1 192 aa10.13□□□□□ -0.79
TUBB3-213ENST00000557262 TRAV26-2A0A0B4J265 109 aa10.12□□□□□ -0.79
TUBB3-213ENST00000557262 GAGE12HA6NDE8 117 aa10.12□□□□□ -0.79
TUBB3-213ENST00000557262 K7EN84 100 aa10.12□□□□□ -0.79
TUBB3-213ENST00000557262 SMIM15Q7Z3B0 74 aa10.12□□□□□ -0.79
TUBB3-213ENST00000557262 A0A087WYN8 130 aa10.11□□□□□ -0.79
TUBB3-213ENST00000557262 NCR2O95944 276 aa10.11□□□□□ -0.79
TUBB3-213ENST00000557262 AMMECR1LQ6DCA0 310 aa10.11□□□□□ -0.79
TUBB3-213ENST00000557262 TEX261Q6UWH6 196 aa10.11□□□□□ -0.79
TUBB3-213ENST00000557262 IGKV3OR2-268A0A0C4DH90 116 aa10.1□□□□□ -0.79
TUBB3-213ENST00000557262 H7C423 109 aa10.1□□□□□ -0.79
TUBB3-213ENST00000557262 Q6ZNX1 250 aa10.1□□□□□ -0.79
TUBB3-213ENST00000557262 Q6ZRU5 148 aa10.1□□□□□ -0.79
TUBB3-213ENST00000557262 C15orf56Q8N910 161 aa10.1□□□□□ -0.79
TUBB3-213ENST00000557262 GTSF1Q8WW33 167 aa10.1□□□□□ -0.79
TUBB3-213ENST00000557262 RPL39LQ96EH5 51 aaKnown RBP10.1□□□□□ -0.79
TUBB3-213ENST00000557262 CHTF8P0CG12 524 aa10.09□□□□□ -0.79
TUBB3-213ENST00000557262 RPS10P46783 165 aaKnown RBP10.09□□□□□ -0.79
TUBB3-213ENST00000557262 FOXA3P55318 350 aaPredicted RBP10.09□□□□□ -0.79
TUBB3-213ENST00000557262 RNASEKQ6P5S7 137 aaKnown RBP10.09□□□□□ -0.79
TUBB3-213ENST00000557262 SPACA4Q8TDM5 124 aa10.09□□□□□ -0.79
TUBB3-213ENST00000557262 PLA2G2DQ9UNK4 145 aa10.09□□□□□ -0.79
TUBB3-213ENST00000557262 SDHAF1A6NFY7 115 aa10.08□□□□□ -0.8
TUBB3-213ENST00000557262 GATCO43716 136 aaKnown RBP10.08□□□□□ -0.8
TUBB3-213ENST00000557262 CHCHD10Q8WYQ3 142 aaPredicted RBP10.08□□□□□ -0.8
TUBB3-213ENST00000557262 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.07□□□□□ -0.8
TUBB3-213ENST00000557262 IGKV2-29A2NJV5 120 aaPredicted RBP10.07□□□□□ -0.8
TUBB3-213ENST00000557262 A8MWL6 223 aa10.07□□□□□ -0.8
TUBB3-213ENST00000557262 TMEM250H0YL14 139 aa10.07□□□□□ -0.8
TUBB3-213ENST00000557262 APCSP02743 223 aa10.07□□□□□ -0.8
TUBB3-213ENST00000557262 FGF6P10767 208 aa10.07□□□□□ -0.8
TUBB3-213ENST00000557262 FAM231DQ6ZW35 169 aa10.07□□□□□ -0.8
TUBB3-213ENST00000557262 PLAC8Q9NZF1 115 aa10.07□□□□□ -0.8
TUBB3-213ENST00000557262 PMCHP20382 165 aa10.06□□□□□ -0.8
TUBB3-213ENST00000557262 BLOC1S1P78537 153 aa10.06□□□□□ -0.8
TUBB3-213ENST00000557262 COX6A2Q02221 97 aa10.06□□□□□ -0.8
TUBB3-213ENST00000557262 HIGD2BQ4VC39 106 aa10.06□□□□□ -0.8
TUBB3-213ENST00000557262 UBR4Q5T4S7 5183 aa10.06□□□□□ -0.8
TUBB3-213ENST00000557262 FAM231BA6NCW3 169 aa10.05□□□□□ -0.8
TUBB3-213ENST00000557262 I3L3M4 83 aa10.05□□□□□ -0.8
TUBB3-213ENST00000557262 NDUFS6O75380 124 aaKnown RBP10.05□□□□□ -0.8
TUBB3-213ENST00000557262 PRSS3P2Q8NHM4 247 aa10.05□□□□□ -0.8
TUBB3-213ENST00000557262 TRBV6-5A0A0K0K1A5 114 aa10.04□□□□□ -0.8
TUBB3-213ENST00000557262 MT1HL1P0DM35 61 aa10.04□□□□□ -0.8
TUBB3-213ENST00000557262 ZNF25P17030 456 aaPredicted RBP10.04□□□□□ -0.8
TUBB3-213ENST00000557262 OR5A1Q8NGJ0 315 aa10.04□□□□□ -0.8
TUBB3-213ENST00000557262 BTF3L4Q96K17 158 aa10.04□□□□□ -0.8
TUBB3-213ENST00000557262 GVQW2A0A096LPI5 108 aaPredicted RBP10.03□□□□□ -0.8
TUBB3-213ENST00000557262 FOXI1Q12951 378 aa10.03□□□□□ -0.8
TUBB3-213ENST00000557262 MAJINQ3KP22 176 aa10.03□□□□□ -0.8
TUBB3-213ENST00000557262 CT83Q5H943 113 aa10.03□□□□□ -0.8
TUBB3-213ENST00000557262 LYPD6BQ8NI32 183 aa10.03□□□□□ -0.8
TUBB3-213ENST00000557262 C7orf33Q8WU49 177 aa10.03□□□□□ -0.8
TUBB3-213ENST00000557262 TMEM101Q96IK0 257 aa10.03□□□□□ -0.8
TUBB3-213ENST00000557262 FAM210AQ96ND0 272 aa10.03□□□□□ -0.8
TUBB3-213ENST00000557262 PHOX2AO14813 284 aa10.02□□□□□ -0.81
TUBB3-213ENST00000557262 ESDP10768 282 aa10.02□□□□□ -0.81
TUBB3-213ENST00000557262 ALKAL2Q6UX46 152 aa10.02□□□□□ -0.81
TUBB3-213ENST00000557262 BORCS7Q96B45 105 aa10.02□□□□□ -0.81
TUBB3-213ENST00000557262 ST20Q9HBF5 79 aa10.02□□□□□ -0.81
TUBB3-213ENST00000557262 IGKV2-24A0A0C4DH68 120 aa10.01□□□□□ -0.81
TUBB3-213ENST00000557262 LINC00959A0A1B0GUT2 108 aa10.01□□□□□ -0.81
TUBB3-213ENST00000557262 GAS8-AS1O95177 125 aa10.01□□□□□ -0.81
TUBB3-213ENST00000557262 CEBPGP53567 150 aa10.01□□□□□ -0.81
TUBB3-213ENST00000557262 A0A1B0GUT8 65 aa10□□□□□ -0.81
TUBB3-213ENST00000557262 TSHBP01222 138 aa10□□□□□ -0.81
TUBB3-213ENST00000557262 XCL1P47992 114 aa10□□□□□ -0.81
TUBB3-213ENST00000557262 POLR2KP53803 58 aaKnown RBP10□□□□□ -0.81
TUBB3-213ENST00000557262 STPG4Q8N801 248 aa10□□□□□ -0.81
TUBB3-213ENST00000557262 TMEM191AQ9H0A3 160 aa10□□□□□ -0.81
TUBB3-213ENST00000557262 HIGD1CA8MV81 97 aa9.99□□□□□ -0.81
TUBB3-213ENST00000557262 CCL25O15444 150 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms