RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 DNAH8Q96JB1 4490 aa6.94□□□□□ -1.3
SHMT2-224ENST00000556737 TRAV9-2A0A087WT02 112 aa6.94□□□□□ -1.3
SHMT2-224ENST00000556737 A0A087WTM6 91 aa6.94□□□□□ -1.3
SHMT2-224ENST00000556737 GAGE12JA6NER3 117 aa6.94□□□□□ -1.3
SHMT2-224ENST00000556737 NDUFA6P56556 154 aa6.94□□□□□ -1.3
SHMT2-224ENST00000556737 GAGE1Q13065 139 aa6.94□□□□□ -1.3
SHMT2-224ENST00000556737 GAGE4Q13068 117 aa6.94□□□□□ -1.3
SHMT2-224ENST00000556737 GAGE5Q13069 117 aa6.94□□□□□ -1.3
SHMT2-224ENST00000556737 GAGE13Q4V321 117 aa6.94□□□□□ -1.3
SHMT2-224ENST00000556737 Q8N3U1 123 aa6.94□□□□□ -1.3
SHMT2-224ENST00000556737 C10orf126Q8N4M7 172 aa6.94□□□□□ -1.3
SHMT2-224ENST00000556737 RNF185Q96GF1 192 aa6.94□□□□□ -1.3
SHMT2-224ENST00000556737 PRELID3AQ96N28 172 aa6.94□□□□□ -1.3
SHMT2-224ENST00000556737 KRTAP4-5Q9BYR2 181 aa6.94□□□□□ -1.3
SHMT2-224ENST00000556737 TRAV8-6A0A0B4J262 113 aa6.93□□□□□ -1.3
SHMT2-224ENST00000556737 IBA57-AS1B1ANH7 110 aa6.93□□□□□ -1.3
SHMT2-224ENST00000556737 PPBPP02775 128 aa6.93□□□□□ -1.3
SHMT2-224ENST00000556737 FUSP35637 526 aaKnown RBP eCLIP6.93□□□□□ -1.3
SHMT2-224ENST00000556737 OR10J3Q5JRS4 329 aa6.93□□□□□ -1.3
SHMT2-224ENST00000556737 BAGE3Q86Y29 109 aa6.93□□□□□ -1.3
SHMT2-224ENST00000556737 MRAP2Q96G30 205 aa6.93□□□□□ -1.3
SHMT2-224ENST00000556737 LOC389332A0A1B0GUA5 103 aa6.92□□□□□ -1.3
SHMT2-224ENST00000556737 H7C1H1 209 aa6.92□□□□□ -1.3
SHMT2-224ENST00000556737 HIST1H2BKO60814 126 aa6.92□□□□□ -1.3
SHMT2-224ENST00000556737 HIST1H2BJP06899 126 aa6.92□□□□□ -1.3
SHMT2-224ENST00000556737 HIST1H2BOP23527 126 aa6.92□□□□□ -1.3
SHMT2-224ENST00000556737 HIST1H2BBP33778 126 aa6.92□□□□□ -1.3
SHMT2-224ENST00000556737 HIST1H2BDP58876 126 aa6.92□□□□□ -1.3
SHMT2-224ENST00000556737 HIST1H2BCP62807 126 aa6.92□□□□□ -1.3
SHMT2-224ENST00000556737 HIST2H2BEQ16778 126 aa6.92□□□□□ -1.3
SHMT2-224ENST00000556737 IQCJQ1A5X6 159 aa6.92□□□□□ -1.3
SHMT2-224ENST00000556737 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.92□□□□□ -1.3
SHMT2-224ENST00000556737 SUMO4Q6EEV6 95 aa6.92□□□□□ -1.3
SHMT2-224ENST00000556737 HIST1H2BHQ93079 126 aa6.92□□□□□ -1.3
SHMT2-224ENST00000556737 HIST1H2BNQ99877 126 aa6.92□□□□□ -1.3
SHMT2-224ENST00000556737 HIST1H2BMQ99879 126 aa6.92□□□□□ -1.3
SHMT2-224ENST00000556737 ALKBH7Q9BT30 221 aaPredicted RBP6.92□□□□□ -1.3
SHMT2-224ENST00000556737 MAP1LC3AQ9H492 121 aa6.92□□□□□ -1.3
SHMT2-224ENST00000556737 KIF25-AS1Q9Y6Z4 181 aa6.92□□□□□ -1.3
SHMT2-224ENST00000556737 VPS13BQ7Z7G8 4022 aa6.92□□□□□ -1.3
SHMT2-224ENST00000556737 LRCOL1A6NCL2 159 aa6.91□□□□□ -1.3
SHMT2-224ENST00000556737 NPYP01303 97 aa6.91□□□□□ -1.3
SHMT2-224ENST00000556737 IGHV3-30P01768 117 aa6.91□□□□□ -1.3
SHMT2-224ENST00000556737 IGHV3-33P01772 117 aa6.91□□□□□ -1.3
SHMT2-224ENST00000556737 IGHV3-30-3P0DP02 117 aa6.91□□□□□ -1.3
SHMT2-224ENST00000556737 IGHV3-30-5P0DP03 117 aa6.91□□□□□ -1.3
SHMT2-224ENST00000556737 TRBV10-1A0A0K0K1A3 114 aa6.9□□□□□ -1.3
SHMT2-224ENST00000556737 PHOX2AO14813 284 aa6.9□□□□□ -1.3
SHMT2-224ENST00000556737 GAS8-AS1O95177 125 aa6.9□□□□□ -1.3
SHMT2-224ENST00000556737 TNFRSF6BO95407 300 aa6.9□□□□□ -1.3
SHMT2-224ENST00000556737 PPP1R17O96001 155 aa6.9□□□□□ -1.3
SHMT2-224ENST00000556737 LAGE3Q14657 143 aa6.9□□□□□ -1.3
SHMT2-224ENST00000556737 CDPF1Q6NVV7 123 aa6.9□□□□□ -1.3
SHMT2-224ENST00000556737 RNASEKQ6P5S7 137 aaKnown RBP6.9□□□□□ -1.3
SHMT2-224ENST00000556737 PRSS3P2Q8NHM4 247 aa6.9□□□□□ -1.3
SHMT2-224ENST00000556737 C18orf32Q8TCD1 76 aa6.9□□□□□ -1.3
SHMT2-224ENST00000556737 RPL39LQ96EH5 51 aaKnown RBP6.9□□□□□ -1.3
SHMT2-224ENST00000556737 Q9HAA7 133 aa6.9□□□□□ -1.3
SHMT2-224ENST00000556737 LAMTOR2Q9Y2Q5 125 aa6.9□□□□□ -1.3
SHMT2-224ENST00000556737 UBE2D3P61077 147 aa6.89□□□□□ -1.31
SHMT2-224ENST00000556737 UBE2D2P62837 147 aa6.89□□□□□ -1.31
SHMT2-224ENST00000556737 FA2HQ7L5A8 372 aa6.89□□□□□ -1.31
SHMT2-224ENST00000556737 MAPKAPK5-AS1Q8N8E1 139 aa6.89□□□□□ -1.31
SHMT2-224ENST00000556737 ST20Q9HBF5 79 aa6.89□□□□□ -1.31
SHMT2-224ENST00000556737 PGPEP1Q9NXJ5 209 aa6.89□□□□□ -1.31
SHMT2-224ENST00000556737 M0QY20 66 aa6.88□□□□□ -1.31
SHMT2-224ENST00000556737 EREGO14944 169 aa6.88□□□□□ -1.31
SHMT2-224ENST00000556737 PMCHP20382 165 aa6.88□□□□□ -1.31
SHMT2-224ENST00000556737 RPL36AP83881 106 aaKnown RBP6.88□□□□□ -1.31
SHMT2-224ENST00000556737 WFDC2Q14508 124 aa6.88□□□□□ -1.31
SHMT2-224ENST00000556737 PDZD11Q5EBL8 140 aa6.88□□□□□ -1.31
SHMT2-224ENST00000556737 DAZ4Q86SG3 579 aaKnown RBP6.88□□□□□ -1.31
SHMT2-224ENST00000556737 NIT1Q86X76 327 aa6.88□□□□□ -1.31
SHMT2-224ENST00000556737 NEXN-AS1Q8NBZ9 246 aa6.88□□□□□ -1.31
SHMT2-224ENST00000556737 RPL36ALQ969Q0 106 aaKnown RBP6.88□□□□□ -1.31
SHMT2-224ENST00000556737 NIT2Q9NQR4 276 aa6.88□□□□□ -1.31
SHMT2-224ENST00000556737 DAZ3Q9NR90 486 aaKnown RBP6.88□□□□□ -1.31
SHMT2-224ENST00000556737 FAT1Q14517 4588 aa6.88□□□□□ -1.31
SHMT2-224ENST00000556737 TRBV7-3A0A075B6L6 115 aa6.87□□□□□ -1.31
SHMT2-224ENST00000556737 SERF1AO75920 110 aa6.87□□□□□ -1.31
SHMT2-224ENST00000556737 S100A2P29034 98 aa6.87□□□□□ -1.31
SHMT2-224ENST00000556737 IFI27P40305 119 aaPredicted RBP6.87□□□□□ -1.31
SHMT2-224ENST00000556737 KRTAP10-1P60331 282 aa6.87□□□□□ -1.31
SHMT2-224ENST00000556737 SUMO2P61956 95 aaKnown RBP6.87□□□□□ -1.31
SHMT2-224ENST00000556737 SNRPEP62304 92 aaKnown RBP6.87□□□□□ -1.31
SHMT2-224ENST00000556737 Q0VG73 95 aa6.87□□□□□ -1.31
SHMT2-224ENST00000556737 NRACQ8N912 160 aa6.87□□□□□ -1.31
SHMT2-224ENST00000556737 SDHAF1A6NFY7 115 aa6.86□□□□□ -1.31
SHMT2-224ENST00000556737 PSCAO43653 123 aa6.86□□□□□ -1.31
SHMT2-224ENST00000556737 HSBP1O75506 76 aa6.86□□□□□ -1.31
SHMT2-224ENST00000556737 Q8N1X5 172 aa6.86□□□□□ -1.31
SHMT2-224ENST00000556737 Q8N814 137 aa6.86□□□□□ -1.31
SHMT2-224ENST00000556737 DEFB104AQ8WTQ1 72 aa6.86□□□□□ -1.31
SHMT2-224ENST00000556737 DNAJC30Q96LL9 226 aa6.86□□□□□ -1.31
SHMT2-224ENST00000556737 C20orf78Q9BR46 151 aa6.86□□□□□ -1.31
SHMT2-224ENST00000556737 SMIM2Q9BVW6 85 aa6.86□□□□□ -1.31
SHMT2-224ENST00000556737 NXT2Q9NPJ8 142 aaKnown RBP6.86□□□□□ -1.31
SHMT2-224ENST00000556737 LINC00614P0C842 121 aa6.85□□□□□ -1.31
SHMT2-224ENST00000556737 FCER1GP30273 86 aa6.85□□□□□ -1.31
SHMT2-224ENST00000556737 XGP55808 180 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms